Gene annotation
Transcriptome id Sobic.001G262301.1
Synonym -
Functional annotation -
UniProt A0A1Z5S7Q5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G094301 - -
2 Sobic.001G300800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
3 Sobic.004G224200 - -
4 Sobic.001G215600 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
5 Sobic.010G100200 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed -
6 Sobic.003G338801 - -
7 Sobic.006G046100 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
8 Sobic.006G200800 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
9 Sobic.009G243500 polygalacturonase, putative, expressed -
10 Sobic.001G192100 "Belongs to the cytochrome P450 family, up-regulated under all the stress condition"(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Belongs to the cytochrome P450 family(PubMedID : 24655390)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
11 Sobic.001G353800 protein kinase domain containing protein, expressed -
12 Sobic.002G357000 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.003G057900 ribosomal protein L5, putative, expressed -
14 Sobic.006G127350 - -
15 Sobic.010G143000 - -
16 Sobic.010G109500 expressed protein -
17 Sobic.006G234100 shikimate/quinate 5-dehydrogenase, putative, expressed K02492: glutamyl-tRNA reductase
18 Sobic.010G154500 - -
19 Sobic.009G024100 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
20 Sobic.006G090400 OsRR1 type-A response regulator, expressed K14492: two-component response regulator ARR-A family


Gene co-expression network
sample Sobic001G262301 Sobic001G262301 Sobic010G094301 Sobic010G094301 Sobic001G262301--Sobic010G094301 Sobic001G300800 Sobic001G300800 Sobic001G262301--Sobic001G300800 Sobic004G224200 Sobic004G224200 Sobic001G262301--Sobic004G224200 Sobic001G215600 Sobic001G215600 Sobic001G262301--Sobic001G215600 Sobic010G100200 Sobic010G100200 Sobic001G262301--Sobic010G100200 Sobic003G338801 Sobic003G338801 Sobic001G262301--Sobic003G338801 Sobic006G046100 Sobic006G046100 Sobic001G262301--Sobic006G046100 Sobic006G200800 Sobic006G200800 Sobic001G262301--Sobic006G200800 Sobic009G243500 Sobic009G243500 Sobic001G262301--Sobic009G243500 Sobic003G057900 Sobic003G057900 Sobic010G094301--Sobic003G057900 Sobic001G353800 Sobic001G353800 Sobic010G094301--Sobic001G353800 Sobic001G192100 Sobic001G192100 Sobic010G094301--Sobic001G192100 Sobic009G132900 Sobic009G132900 Sobic010G094301--Sobic009G132900 Sobic006G234100 Sobic006G234100 Sobic010G094301--Sobic006G234100 Sobic010G109500 Sobic010G109500 Sobic010G094301--Sobic010G109500 Sobic002G339200 Sobic002G339200 Sobic010G094301--Sobic002G339200 Sobic001G448400 Sobic001G448400 Sobic010G094301--Sobic001G448400 Sobic006G264201 Sobic006G264201 Sobic010G094301--Sobic006G264201 Sobic004G095000 Sobic004G095000 Sobic001G300800--Sobic004G095000 Sobic010G093500 Sobic010G093500 Sobic001G300800--Sobic010G093500 Sobic001G300800--Sobic003G338801 Sobic001G300800--Sobic010G094301 Sobic003G069100 Sobic003G069100 Sobic001G300800--Sobic003G069100 Sobic001G301600 Sobic001G301600 Sobic001G300800--Sobic001G301600 Sobic001G361700 Sobic001G361700 Sobic001G300800--Sobic001G361700 Sobic001G300800--Sobic001G262301 Sobic002G213000 Sobic002G213000 Sobic001G300800--Sobic002G213000 Sobic004G224200--Sobic010G094301 Sobic010G055000 Sobic010G055000 Sobic004G224200--Sobic010G055000 Sobic004G224200--Sobic001G262301 Sobic004G224200--Sobic001G192100 Sobic004G224200--Sobic003G338801 Sobic006G249400 Sobic006G249400 Sobic004G224200--Sobic006G249400 Sobic004G224200--Sobic001G353800 Sobic004G224200--Sobic006G264201 Sobic008G051000 Sobic008G051000 Sobic004G224200--Sobic008G051000 Sobic001G215600--Sobic003G338801 Sobic002G357000 Sobic002G357000 Sobic001G215600--Sobic002G357000 Sobic001G215600--Sobic001G262301 Sobic001G215600--Sobic010G094301 Sobic001G215600--Sobic001G301600 Sobic010G015800 Sobic010G015800 Sobic001G215600--Sobic010G015800 Sobic007G058200 Sobic007G058200 Sobic001G215600--Sobic007G058200 Sobic001G215600--Sobic006G200800 Sobic001G327900 Sobic001G327900 Sobic001G215600--Sobic001G327900 Sobic005G167500 Sobic005G167500 Sobic010G100200--Sobic005G167500 Sobic008G036300 Sobic008G036300 Sobic010G100200--Sobic008G036300 Sobic003G058001 Sobic003G058001 Sobic010G100200--Sobic003G058001 Sobic008G080400 Sobic008G080400 Sobic010G100200--Sobic008G080400 Sobic004G182700 Sobic004G182700 Sobic010G100200--Sobic004G182700 Sobic010G100200--Sobic010G094301 Sobic010G157000 Sobic010G157000 Sobic010G100200--Sobic010G157000 Sobic010G100200--Sobic001G353800 Sobic005G167400 Sobic005G167400 Sobic010G100200--Sobic005G167400 Sobic007G116950 Sobic007G116950 Sobic003G338801--Sobic007G116950 Sobic001G464700 Sobic001G464700 Sobic003G338801--Sobic001G464700 Sobic003G099400 Sobic003G099400 Sobic003G338801--Sobic003G099400 Sobic003G338801--Sobic001G448400 Sobic003G338801--Sobic010G094301 Sobic009G091850 Sobic009G091850 Sobic003G338801--Sobic009G091850 Sobic001G382100 Sobic001G382100 Sobic003G338801--Sobic001G382100 Sobic003G338801--Sobic008G051000 Sobic003G338801--Sobic002G357000 Sobic006G090400 Sobic006G090400 Sobic006G046100--Sobic006G090400 Sobic009G070250 Sobic009G070250 Sobic006G046100--Sobic009G070250 Sobic006G046100--Sobic001G300800 Sobic006G046100--Sobic010G093500 Sobic005G102350 Sobic005G102350 Sobic006G046100--Sobic005G102350 Sobic005G127900 Sobic005G127900 Sobic006G046100--Sobic005G127900 Sobic006G046100--Sobic010G094301 Sobic006G090300 Sobic006G090300 Sobic006G046100--Sobic006G090300 Sobic001G344400 Sobic001G344400 Sobic006G046100--Sobic001G344400 Sobic008G019100 Sobic008G019100 Sobic006G200800--Sobic008G019100 Sobic008G021300 Sobic008G021300 Sobic006G200800--Sobic008G021300 Sobic006G054300 Sobic006G054300 Sobic006G200800--Sobic006G054300 Sobic006G200800--Sobic001G192100 Sobic004G274100 Sobic004G274100 Sobic006G200800--Sobic004G274100 Sobic001G010100 Sobic001G010100 Sobic006G200800--Sobic001G010100 Sobic004G343900 Sobic004G343900 Sobic006G200800--Sobic004G343900 Sobic003G132100 Sobic003G132100 Sobic006G200800--Sobic003G132100 Sobic001G527000 Sobic001G527000 Sobic006G200800--Sobic001G527000 Sobic002G040100 Sobic002G040100 Sobic009G243500--Sobic002G040100 Sobic006G011100 Sobic006G011100 Sobic009G243500--Sobic006G011100 Sobic008G038300 Sobic008G038300 Sobic009G243500--Sobic008G038300 Sobic002G000500 Sobic002G000500 Sobic009G243500--Sobic002G000500 Sobic009G243500--Sobic010G109500 Sobic001G274600 Sobic001G274600 Sobic009G243500--Sobic001G274600 Sobic010G276400 Sobic010G276400 Sobic009G243500--Sobic010G276400 Sobic001G068400 Sobic001G068400 Sobic009G243500--Sobic001G068400 Sobic003G209800 Sobic003G209800 Sobic009G243500--Sobic003G209800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.