Gene annotation
Transcriptome id Sobic.004G224200.2
Synonym
Functional annotation -
UniProt A0A1Z5RNP1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G094301 - -
2 Sobic.010G055000 OsWAK63 - OsWAK receptor-like protein kinase, expressed -
3 Sobic.001G262301 - -
4 Sobic.001G192100 "Belongs to the cytochrome P450 family, up-regulated under all the stress condition"(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Belongs to the cytochrome P450 family(PubMedID : 24655390)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
5 Sobic.003G338801 - -
6 Sobic.006G249400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@glutamine synthetase, catalytic domain containing protein, expressed K01915: glnA, glutamine synthetase
7 Sobic.001G353800 protein kinase domain containing protein, expressed -
8 Sobic.006G264201 - K08917: light-harvesting complex II chlorophyll a/b binding protein 6
9 Sobic.008G051000 magnesium-chelatase subunit chlI, chloroplast precursor, putative, expressed K03405: chlI, magnesium chelatase subunit I
10 Sobic.007G116950 - -
11 Sobic.003G057900 ribosomal protein L5, putative, expressed -
12 Sobic.006G033800 cytochrome P450, putative, expressed -
13 Sobic.001G023700 expressed protein -
14 Sobic.003G383900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
15 Sobic.003G150600 pectinacetylesterase domain containing protein, expressed -
16 Sobic.006G200800 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
17 Sobic.010G208400 OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
18 Sobic.004G238500 Geranylgeranyl reductase (Os)(PubMedID : 27208977)@FAD binding domain containing protein, expressed K10960: chlP, geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase
19 Sobic.002G339200 Chorophyll a/b binding protein(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Light harvesting complex-II subunit B3(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08914: light-harvesting complex II chlorophyll a/b binding protein 3
20 Sobic.005G167400 resistance protein, putative, expressed -


Gene co-expression network
sample Sobic004G224200 Sobic004G224200 Sobic010G094301 Sobic010G094301 Sobic004G224200--Sobic010G094301 Sobic010G055000 Sobic010G055000 Sobic004G224200--Sobic010G055000 Sobic001G262301 Sobic001G262301 Sobic004G224200--Sobic001G262301 Sobic001G192100 Sobic001G192100 Sobic004G224200--Sobic001G192100 Sobic003G338801 Sobic003G338801 Sobic004G224200--Sobic003G338801 Sobic006G249400 Sobic006G249400 Sobic004G224200--Sobic006G249400 Sobic001G353800 Sobic001G353800 Sobic004G224200--Sobic001G353800 Sobic006G264201 Sobic006G264201 Sobic004G224200--Sobic006G264201 Sobic008G051000 Sobic008G051000 Sobic004G224200--Sobic008G051000 Sobic003G057900 Sobic003G057900 Sobic010G094301--Sobic003G057900 Sobic010G094301--Sobic001G353800 Sobic010G094301--Sobic001G192100 Sobic009G132900 Sobic009G132900 Sobic010G094301--Sobic009G132900 Sobic006G234100 Sobic006G234100 Sobic010G094301--Sobic006G234100 Sobic010G109500 Sobic010G109500 Sobic010G094301--Sobic010G109500 Sobic002G339200 Sobic002G339200 Sobic010G094301--Sobic002G339200 Sobic001G448400 Sobic001G448400 Sobic010G094301--Sobic001G448400 Sobic010G094301--Sobic006G264201 Sobic005G116100 Sobic005G116100 Sobic010G055000--Sobic005G116100 Sobic006G054300 Sobic006G054300 Sobic010G055000--Sobic006G054300 Sobic004G183100 Sobic004G183100 Sobic010G055000--Sobic004G183100 Sobic002G152700 Sobic002G152700 Sobic010G055000--Sobic002G152700 Sobic002G271700 Sobic002G271700 Sobic010G055000--Sobic002G271700 Sobic001G527000 Sobic001G527000 Sobic010G055000--Sobic001G527000 Sobic010G005500 Sobic010G005500 Sobic010G055000--Sobic010G005500 Sobic009G183700 Sobic009G183700 Sobic010G055000--Sobic009G183700 Sobic008G119250 Sobic008G119250 Sobic010G055000--Sobic008G119250 Sobic001G262301--Sobic010G094301 Sobic001G300800 Sobic001G300800 Sobic001G262301--Sobic001G300800 Sobic001G262301--Sobic004G224200 Sobic001G215600 Sobic001G215600 Sobic001G262301--Sobic001G215600 Sobic010G100200 Sobic010G100200 Sobic001G262301--Sobic010G100200 Sobic001G262301--Sobic003G338801 Sobic006G046100 Sobic006G046100 Sobic001G262301--Sobic006G046100 Sobic006G200800 Sobic006G200800 Sobic001G262301--Sobic006G200800 Sobic009G243500 Sobic009G243500 Sobic001G262301--Sobic009G243500 Sobic001G192100--Sobic003G057900 Sobic010G006350 Sobic010G006350 Sobic001G192100--Sobic010G006350 Sobic001G464700 Sobic001G464700 Sobic001G192100--Sobic001G464700 Sobic010G255600 Sobic010G255600 Sobic001G192100--Sobic010G255600 Sobic001G192100--Sobic010G094301 Sobic003G099400 Sobic003G099400 Sobic001G192100--Sobic003G099400 Sobic003G132100 Sobic003G132100 Sobic001G192100--Sobic003G132100 Sobic009G091850 Sobic009G091850 Sobic001G192100--Sobic009G091850 Sobic001G192100--Sobic009G132900 Sobic007G116950 Sobic007G116950 Sobic003G338801--Sobic007G116950 Sobic003G338801--Sobic001G464700 Sobic003G338801--Sobic003G099400 Sobic003G338801--Sobic001G448400 Sobic003G338801--Sobic010G094301 Sobic003G338801--Sobic009G091850 Sobic001G382100 Sobic001G382100 Sobic003G338801--Sobic001G382100 Sobic003G338801--Sobic008G051000 Sobic002G357000 Sobic002G357000 Sobic003G338801--Sobic002G357000 Sobic004G044200 Sobic004G044200 Sobic006G249400--Sobic004G044200 Sobic003G234101 Sobic003G234101 Sobic006G249400--Sobic003G234101 Sobic007G075700 Sobic007G075700 Sobic006G249400--Sobic007G075700 Sobic005G218600 Sobic005G218600 Sobic006G249400--Sobic005G218600 Sobic004G309300 Sobic004G309300 Sobic006G249400--Sobic004G309300 Sobic006G256200 Sobic006G256200 Sobic006G249400--Sobic006G256200 Sobic005G218700 Sobic005G218700 Sobic006G249400--Sobic005G218700 Sobic006G033800 Sobic006G033800 Sobic006G249400--Sobic006G033800 Sobic001G012600 Sobic001G012600 Sobic006G249400--Sobic001G012600 Sobic005G167400 Sobic005G167400 Sobic001G353800--Sobic005G167400 Sobic001G353800--Sobic010G094301 Sobic004G238500 Sobic004G238500 Sobic001G353800--Sobic004G238500 Sobic001G353800--Sobic006G264201 Sobic009G234600 Sobic009G234600 Sobic001G353800--Sobic009G234600 Sobic001G353800--Sobic008G051000 Sobic003G150600 Sobic003G150600 Sobic001G353800--Sobic003G150600 Sobic001G177000 Sobic001G177000 Sobic001G353800--Sobic001G177000 Sobic001G353800--Sobic010G100200 Sobic002G329600 Sobic002G329600 Sobic006G264201--Sobic002G329600 Sobic006G264201--Sobic002G339200 Sobic006G264201--Sobic004G238500 Sobic006G264201--Sobic009G234600 Sobic007G029300 Sobic007G029300 Sobic006G264201--Sobic007G029300 Sobic010G241000 Sobic010G241000 Sobic006G264201--Sobic010G241000 Sobic001G078000 Sobic001G078000 Sobic006G264201--Sobic001G078000 Sobic006G264201--Sobic001G448400 Sobic009G091800 Sobic009G091800 Sobic006G264201--Sobic009G091800 Sobic008G051000--Sobic009G091800 Sobic008G051000--Sobic004G238500 Sobic008G051000--Sobic007G116950 Sobic001G203000 Sobic001G203000 Sobic008G051000--Sobic001G203000 Sobic008G051000--Sobic003G132100 Sobic008G051000--Sobic006G264201 Sobic008G051000--Sobic009G091850 Sobic004G234200 Sobic004G234200 Sobic008G051000--Sobic004G234200 Sobic002G297300 Sobic002G297300 Sobic008G051000--Sobic002G297300
Octagon: transcription factors


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