Gene annotation
Transcriptome id Sobic.001G273800.1
Synonym ACYB-1, CYB-1, Sb01g026870
Functional annotation cytochrome b561, putative, expressed
UniProt C5WPU0
Pfam PF03188
Panther DB PTHR10106 PTHR10106:SF13
NCBI CDD KOG1619; Cytochrome b
KEGG Orthology K08360; cytochrome b-561
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G25570 : Cytochrome b561/ferric reductase transmembrane protein family
RAP-DB (Rice) LOC_Os10g02920.1 : cytochrome b561, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT67123
Barley HORVU3Hr1G111630.1
Wheat TraesCSU02G053100 , TraesCS3D02G514800 , TraesCS3A02G507300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G313900 rhoGAP domain containing protein, expressed -
2 Sobic.010G240800 REV1, putative, expressed K03515: DNA repair protein REV1
3 Sobic.010G027500 kinesin motor domain containing protein, expressed -
4 Sobic.008G019300 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
5 Sobic.008G057000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
6 Sobic.003G074200 actin, putative, expressed K11672: ACTR5, ARP5, actin-related protein 5
7 Sobic.003G151000 AGAP010768-PA, putative, expressed -
8 Sobic.004G325600 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12896: splicing factor, arginine/serine-rich 7
9 Sobic.007G004000 YL1 nuclear protein C-terminal domain containing protein, expressed K11664: VPS72, TCFL1, vacuolar protein sorting-associated protein 72
10 Sobic.010G197800 expressed protein -
11 Sobic.005G022300 - -
12 Sobic.009G031500 agenet domain containing protein, putative, expressed -
13 Sobic.004G158300 transcription factor, putative, expressed -
14 Sobic.001G484200 "RGA1/D1(Ortholog in rice:Ashikari, 1999)"(PubMedID : 31659848)@G-protein alpha subunit, putative, expressed K04640: guanine nucleotide-binding protein subunit alpha, other
15 Sobic.006G051900 expressed protein -
16 Sobic.006G169500 L-asparaginase precursor protein, putative, expressed K01444: AGA, N4-(beta-N-acetylglucosaminyl)-L-asparaginase
17 Sobic.004G129600 expressed protein -
18 Sobic.004G212700 RNA recognition motif containing protein, putative, expressed K12883: NCBP2, nuclear cap-binding protein subunit 2
19 Sobic.007G174600 glutamate synthase, chloroplast precursor, putative, expressed -
20 Sobic.002G277600 XAP5 family protein, putative, expressed K13119: FAM50, protein FAM50


Gene co-expression network
sample Sobic001G273800 Sobic001G273800 Sobic001G313900 Sobic001G313900 Sobic001G273800--Sobic001G313900 Sobic010G240800 Sobic010G240800 Sobic001G273800--Sobic010G240800 Sobic010G027500 Sobic010G027500 Sobic001G273800--Sobic010G027500 Sobic008G019300 Sobic008G019300 Sobic001G273800--Sobic008G019300 Sobic008G057000 Sobic008G057000 Sobic001G273800--Sobic008G057000 Sobic003G074200 Sobic003G074200 Sobic001G273800--Sobic003G074200 Sobic003G151000 Sobic003G151000 Sobic001G273800--Sobic003G151000 Sobic004G325600 Sobic004G325600 Sobic001G273800--Sobic004G325600 Sobic007G004000 Sobic007G004000 Sobic001G273800--Sobic007G004000 Sobic010G237900 Sobic010G237900 Sobic001G313900--Sobic010G237900 Sobic001G070600 Sobic001G070600 Sobic001G313900--Sobic001G070600 Sobic007G159900 Sobic007G159900 Sobic001G313900--Sobic007G159900 Sobic003G175100 Sobic003G175100 Sobic001G313900--Sobic003G175100 Sobic004G129300 Sobic004G129300 Sobic001G313900--Sobic004G129300 Sobic008G145800 Sobic008G145800 Sobic001G313900--Sobic008G145800 Sobic001G250700 Sobic001G250700 Sobic001G313900--Sobic001G250700 Sobic006G063001 Sobic006G063001 Sobic001G313900--Sobic006G063001 Sobic002G148750 Sobic002G148750 Sobic001G313900--Sobic002G148750 Sobic002G154400 Sobic002G154400 Sobic010G240800--Sobic002G154400 Sobic010G240800--Sobic008G057000 Sobic001G222000 Sobic001G222000 Sobic010G240800--Sobic001G222000 Sobic009G032200 Sobic009G032200 Sobic010G240800--Sobic009G032200 Sobic007G039300 Sobic007G039300 Sobic010G240800--Sobic007G039300 Sobic010G240800--Sobic007G004000 Sobic001G355200 Sobic001G355200 Sobic010G240800--Sobic001G355200 Sobic002G263700 Sobic002G263700 Sobic010G240800--Sobic002G263700 Sobic007G168300 Sobic007G168300 Sobic010G240800--Sobic007G168300 Sobic002G374400 Sobic002G374400 Sobic010G027500--Sobic002G374400 Sobic007G125700 Sobic007G125700 Sobic010G027500--Sobic007G125700 Sobic009G031500 Sobic009G031500 Sobic010G027500--Sobic009G031500 Sobic004G043750 Sobic004G043750 Sobic010G027500--Sobic004G043750 Sobic008G015200 Sobic008G015200 Sobic010G027500--Sobic008G015200 Sobic007G197100 Sobic007G197100 Sobic010G027500--Sobic007G197100 Sobic001G540700 Sobic001G540700 Sobic010G027500--Sobic001G540700 Sobic001G367100 Sobic001G367100 Sobic010G027500--Sobic001G367100 Sobic004G129600 Sobic004G129600 Sobic010G027500--Sobic004G129600 Sobic005G173532 Sobic005G173532 Sobic008G019300--Sobic005G173532 Sobic008G019300--Sobic001G273800 Sobic008G019300--Sobic001G313900 Sobic009G017732 Sobic009G017732 Sobic008G019300--Sobic009G017732 Sobic002G272250 Sobic002G272250 Sobic008G019300--Sobic002G272250 Sobic003G344700 Sobic003G344700 Sobic008G019300--Sobic003G344700 Sobic003G271600 Sobic003G271600 Sobic008G019300--Sobic003G271600 Sobic001G300800 Sobic001G300800 Sobic008G019300--Sobic001G300800 Sobic008G066600 Sobic008G066600 Sobic008G019300--Sobic008G066600 Sobic003G409200 Sobic003G409200 Sobic008G057000--Sobic003G409200 Sobic005G200800 Sobic005G200800 Sobic008G057000--Sobic005G200800 Sobic001G346900 Sobic001G346900 Sobic008G057000--Sobic001G346900 Sobic004G086200 Sobic004G086200 Sobic008G057000--Sobic004G086200 Sobic002G148400 Sobic002G148400 Sobic008G057000--Sobic002G148400 Sobic010G279900 Sobic010G279900 Sobic008G057000--Sobic010G279900 Sobic001G484200 Sobic001G484200 Sobic008G057000--Sobic001G484200 Sobic008G057000--Sobic009G032200 Sobic007G183300 Sobic007G183300 Sobic008G057000--Sobic007G183300 Sobic003G074200--Sobic007G168300 Sobic003G062300 Sobic003G062300 Sobic003G074200--Sobic003G062300 Sobic004G309900 Sobic004G309900 Sobic003G074200--Sobic004G309900 Sobic003G194500 Sobic003G194500 Sobic003G074200--Sobic003G194500 Sobic004G236800 Sobic004G236800 Sobic003G074200--Sobic004G236800 Sobic001G008200 Sobic001G008200 Sobic003G074200--Sobic001G008200 Sobic003G405500 Sobic003G405500 Sobic003G074200--Sobic003G405500 Sobic006G210000 Sobic006G210000 Sobic003G074200--Sobic006G210000 Sobic003G042400 Sobic003G042400 Sobic003G074200--Sobic003G042400 Sobic004G019600 Sobic004G019600 Sobic003G151000--Sobic004G019600 Sobic004G212700 Sobic004G212700 Sobic003G151000--Sobic004G212700 Sobic001G346300 Sobic001G346300 Sobic003G151000--Sobic001G346300 Sobic006G087100 Sobic006G087100 Sobic003G151000--Sobic006G087100 Sobic010G171100 Sobic010G171100 Sobic003G151000--Sobic010G171100 Sobic004G095300 Sobic004G095300 Sobic003G151000--Sobic004G095300 Sobic001G136500 Sobic001G136500 Sobic003G151000--Sobic001G136500 Sobic005G046900 Sobic005G046900 Sobic003G151000--Sobic005G046900 Sobic010G197800 Sobic010G197800 Sobic003G151000--Sobic010G197800 Sobic001G527300 Sobic001G527300 Sobic004G325600--Sobic001G527300 Sobic001G291800 Sobic001G291800 Sobic004G325600--Sobic001G291800 Sobic008G147200 Sobic008G147200 Sobic004G325600--Sobic008G147200 Sobic004G133700 Sobic004G133700 Sobic004G325600--Sobic004G133700 Sobic002G145800 Sobic002G145800 Sobic004G325600--Sobic002G145800 Sobic005G114400 Sobic005G114400 Sobic004G325600--Sobic005G114400 Sobic002G257200 Sobic002G257200 Sobic004G325600--Sobic002G257200 Sobic010G009800 Sobic010G009800 Sobic004G325600--Sobic010G009800 Sobic004G325600--Sobic008G057000 Sobic004G049700 Sobic004G049700 Sobic007G004000--Sobic004G049700 Sobic002G127100 Sobic002G127100 Sobic007G004000--Sobic002G127100 Sobic006G161000 Sobic006G161000 Sobic007G004000--Sobic006G161000 Sobic002G388500 Sobic002G388500 Sobic007G004000--Sobic002G388500 Sobic007G009700 Sobic007G009700 Sobic007G004000--Sobic007G009700 Sobic007G004000--Sobic007G168300 Sobic006G251900 Sobic006G251900 Sobic007G004000--Sobic006G251900 Sobic010G130100 Sobic010G130100 Sobic007G004000--Sobic010G130100 Sobic003G114500 Sobic003G114500 Sobic007G004000--Sobic003G114500
Octagon: transcription factors


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