Gene annotation
Transcriptome id Sobic.003G151000.1
Synonym Sb03g013110
Functional annotation AGAP010768-PA, putative, expressed
UniProt C5XIX0
Pfam PF10187
Panther DB PTHR13495 PTHR13495:SF0
NCBI CDD KOG4036; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62140 : -
RAP-DB (Rice) LOC_Os01g21860.1 : AGAP010768-PA, putative, expressed
MaizeGDB (Corn) Zm00025a036141
Brachypodium -
Barley -
Wheat TraesCS3B02G134000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G019600 histone deacetylase complex subunit SAP18, putative, expressed K14324: histone deacetylase complex subunit SAP18
2 Sobic.004G212700 RNA recognition motif containing protein, putative, expressed K12883: NCBP2, nuclear cap-binding protein subunit 2
3 Sobic.001G346300 WD domain, G-beta repeat domain containing protein, expressed K12816: CDC40, pre-mRNA-processing factor 17
4 Sobic.006G087100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K14943: muscleblind
5 Sobic.010G171100 RNA recognition motif containing protein, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
6 Sobic.004G095300 RNA recognition motif containing protein, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
7 Sobic.001G136500 RNA recognition motif containing protein, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
8 Sobic.005G046900 expressed protein K08331: autophagy-related protein 13
9 Sobic.010G197800 expressed protein -
10 Sobic.001G218800 expressed protein -
11 Sobic.009G209100 plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
12 Sobic.002G332400 PPR repeat domain containing protein, putative, expressed -
13 Sobic.001G119900 - K12858: DDX23, ATP-dependent RNA helicase DDX23/PRP28
14 Sobic.006G051900 expressed protein -
15 Sobic.009G130500 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed K01814: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
16 Sobic.008G051100 RNA polymerase II subunit A C-terminal domain phosphatase ssu72, putative, expressed K15544: RNA polymerase II subunit A C-terminal domain phosphatase SSU72
17 Sobic.001G152000 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
18 Sobic.001G471600 acetyltransferase, GNAT family, putative, expressed -
19 Sobic.006G011000 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed K12893: splicing factor, arginine/serine-rich 4/5/6
20 Sobic.006G275800 dehydrogenase, putative, expressed K00052: leuB, 3-isopropylmalate dehydrogenase


Gene co-expression network
sample Sobic003G151000 Sobic003G151000 Sobic004G019600 Sobic004G019600 Sobic003G151000--Sobic004G019600 Sobic004G212700 Sobic004G212700 Sobic003G151000--Sobic004G212700 Sobic001G346300 Sobic001G346300 Sobic003G151000--Sobic001G346300 Sobic006G087100 Sobic006G087100 Sobic003G151000--Sobic006G087100 Sobic010G171100 Sobic010G171100 Sobic003G151000--Sobic010G171100 Sobic004G095300 Sobic004G095300 Sobic003G151000--Sobic004G095300 Sobic001G136500 Sobic001G136500 Sobic003G151000--Sobic001G136500 Sobic005G046900 Sobic005G046900 Sobic003G151000--Sobic005G046900 Sobic010G197800 Sobic010G197800 Sobic003G151000--Sobic010G197800 Sobic002G204000 Sobic002G204000 Sobic004G019600--Sobic002G204000 Sobic004G019600--Sobic001G346300 Sobic001G114500 Sobic001G114500 Sobic004G019600--Sobic001G114500 Sobic010G220900 Sobic010G220900 Sobic004G019600--Sobic010G220900 Sobic004G019600--Sobic006G087100 Sobic001G152000 Sobic001G152000 Sobic004G019600--Sobic001G152000 Sobic009G258400 Sobic009G258400 Sobic004G019600--Sobic009G258400 Sobic004G019600--Sobic004G212700 Sobic009G231900 Sobic009G231900 Sobic004G019600--Sobic009G231900 Sobic004G129600 Sobic004G129600 Sobic004G212700--Sobic004G129600 Sobic004G206300 Sobic004G206300 Sobic004G212700--Sobic004G206300 Sobic004G212700--Sobic004G019600 Sobic006G245700 Sobic006G245700 Sobic004G212700--Sobic006G245700 Sobic004G212700--Sobic001G346300 Sobic003G274400 Sobic003G274400 Sobic004G212700--Sobic003G274400 Sobic010G154000 Sobic010G154000 Sobic004G212700--Sobic010G154000 Sobic002G394800 Sobic002G394800 Sobic004G212700--Sobic002G394800 Sobic004G198900 Sobic004G198900 Sobic004G212700--Sobic004G198900 Sobic001G346300--Sobic004G019600 Sobic001G346300--Sobic006G087100 Sobic001G291800 Sobic001G291800 Sobic001G346300--Sobic001G291800 Sobic001G346300--Sobic009G258400 Sobic010G186600 Sobic010G186600 Sobic001G346300--Sobic010G186600 Sobic006G010000 Sobic006G010000 Sobic001G346300--Sobic006G010000 Sobic001G346300--Sobic001G152000 Sobic001G346300--Sobic004G212700 Sobic006G233300 Sobic006G233300 Sobic001G346300--Sobic006G233300 Sobic006G087100--Sobic010G220900 Sobic006G087100--Sobic004G019600 Sobic006G087100--Sobic001G346300 Sobic009G108500 Sobic009G108500 Sobic006G087100--Sobic009G108500 Sobic008G118500 Sobic008G118500 Sobic006G087100--Sobic008G118500 Sobic004G133700 Sobic004G133700 Sobic006G087100--Sobic004G133700 Sobic001G218800 Sobic001G218800 Sobic006G087100--Sobic001G218800 Sobic003G122000 Sobic003G122000 Sobic006G087100--Sobic003G122000 Sobic002G359900 Sobic002G359900 Sobic006G087100--Sobic002G359900 Sobic010G171100--Sobic004G095300 Sobic003G122500 Sobic003G122500 Sobic010G171100--Sobic003G122500 Sobic003G123000 Sobic003G123000 Sobic010G171100--Sobic003G123000 Sobic010G228700 Sobic010G228700 Sobic010G171100--Sobic010G228700 Sobic005G220000 Sobic005G220000 Sobic010G171100--Sobic005G220000 Sobic010G085200 Sobic010G085200 Sobic010G171100--Sobic010G085200 Sobic001G088100 Sobic001G088100 Sobic010G171100--Sobic001G088100 Sobic002G058700 Sobic002G058700 Sobic010G171100--Sobic002G058700 Sobic007G084100 Sobic007G084100 Sobic010G171100--Sobic007G084100 Sobic004G095300--Sobic010G171100 Sobic004G095300--Sobic003G123000 Sobic001G003500 Sobic001G003500 Sobic004G095300--Sobic001G003500 Sobic002G092300 Sobic002G092300 Sobic004G095300--Sobic002G092300 Sobic001G473600 Sobic001G473600 Sobic004G095300--Sobic001G473600 Sobic004G095300--Sobic001G088100 Sobic004G095300--Sobic005G220000 Sobic004G095300--Sobic010G085200 Sobic002G180000 Sobic002G180000 Sobic004G095300--Sobic002G180000 Sobic001G132900 Sobic001G132900 Sobic001G136500--Sobic001G132900 Sobic001G099800 Sobic001G099800 Sobic001G136500--Sobic001G099800 Sobic009G056300 Sobic009G056300 Sobic001G136500--Sobic009G056300 Sobic008G008300 Sobic008G008300 Sobic001G136500--Sobic008G008300 Sobic010G079800 Sobic010G079800 Sobic001G136500--Sobic010G079800 Sobic006G276200 Sobic006G276200 Sobic001G136500--Sobic006G276200 Sobic004G146200 Sobic004G146200 Sobic001G136500--Sobic004G146200 Sobic008G125000 Sobic008G125000 Sobic001G136500--Sobic008G125000 Sobic001G136500--Sobic004G206300 Sobic006G276000 Sobic006G276000 Sobic005G046900--Sobic006G276000 Sobic007G041300 Sobic007G041300 Sobic005G046900--Sobic007G041300 Sobic005G079800 Sobic005G079800 Sobic005G046900--Sobic005G079800 Sobic003G427100 Sobic003G427100 Sobic005G046900--Sobic003G427100 Sobic001G013300 Sobic001G013300 Sobic005G046900--Sobic001G013300 Sobic006G120800 Sobic006G120800 Sobic005G046900--Sobic006G120800 Sobic008G057000 Sobic008G057000 Sobic005G046900--Sobic008G057000 Sobic005G191700 Sobic005G191700 Sobic005G046900--Sobic005G191700 Sobic003G409200 Sobic003G409200 Sobic005G046900--Sobic003G409200 Sobic007G050300 Sobic007G050300 Sobic010G197800--Sobic007G050300 Sobic006G051900 Sobic006G051900 Sobic010G197800--Sobic006G051900 Sobic001G335500 Sobic001G335500 Sobic010G197800--Sobic001G335500 Sobic007G210300 Sobic007G210300 Sobic010G197800--Sobic007G210300 Sobic003G253400 Sobic003G253400 Sobic010G197800--Sobic003G253400 Sobic002G224700 Sobic002G224700 Sobic010G197800--Sobic002G224700 Sobic010G197800--Sobic006G276000 Sobic005G032400 Sobic005G032400 Sobic010G197800--Sobic005G032400 Sobic010G197800--Sobic006G120800
Octagon: transcription factors


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