Gene annotation
Transcriptome id Sobic.001G274700.1,Sobic.001G274700.2
Synonym
Functional annotation -
UniProt A0A1B6QLE9 , A0A1Z5S7V8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G274700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G151900 ribonuclease P family protein, putative, expressed K03538: POP4, ribonuclease P protein subunit POP4
2 Sobic.001G267900 - -
3 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
4 Sobic.005G195800 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
5 Sobic.009G045700 E3 ubiquitin-protein ligase SINA-like, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
6 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
7 Sobic.008G011100 OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed -
8 Sobic.010G056000 GAGA-binding protein, putative, expressed -
9 Sobic.001G124000 pinin/SDK/memA protein, putative, expressed K13114: pinin
10 Sobic.007G096000 expressed protein -
11 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
12 Sobic.001G360900 peptidyl-prolyl isomerase PASTICCINO1, putative, expressed -
13 Sobic.002G336800 PPR repeat domain containing protein, putative, expressed -
14 Sobic.003G045200 expressed protein K18404: tudor domain-containing protein 3
15 Sobic.005G106101 - -
16 Sobic.009G074700 heat shock protein binding protein, putative, expressed K09540: SEC63, translocation protein SEC63
17 Sobic.007G043900 Brix domain containing protein, putative, expressed K14561: U3 small nucleolar ribonucleoprotein protein IMP4
18 Sobic.002G396000 XPA-binding protein 2, putative, expressed K12867: SYF1, pre-mRNA-splicing factor SYF1
19 Sobic.004G246700 zinc finger family protein, putative, expressed -
20 Sobic.009G215800 OsFBX173 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G274700 Sobic001G274700 Sobic010G151900 Sobic010G151900 Sobic001G274700--Sobic010G151900 Sobic001G267900 Sobic001G267900 Sobic001G274700--Sobic001G267900 Sobic007G132400 Sobic007G132400 Sobic001G274700--Sobic007G132400 Sobic005G195800 Sobic005G195800 Sobic001G274700--Sobic005G195800 Sobic009G045700 Sobic009G045700 Sobic001G274700--Sobic009G045700 Sobic001G298600 Sobic001G298600 Sobic001G274700--Sobic001G298600 Sobic008G011100 Sobic008G011100 Sobic001G274700--Sobic008G011100 Sobic010G056000 Sobic010G056000 Sobic001G274700--Sobic010G056000 Sobic001G124000 Sobic001G124000 Sobic001G274700--Sobic001G124000 Sobic006G253000 Sobic006G253000 Sobic010G151900--Sobic006G253000 Sobic003G006400 Sobic003G006400 Sobic010G151900--Sobic003G006400 Sobic010G166400 Sobic010G166400 Sobic010G151900--Sobic010G166400 Sobic001G441400 Sobic001G441400 Sobic010G151900--Sobic001G441400 Sobic004G006900 Sobic004G006900 Sobic010G151900--Sobic004G006900 Sobic003G187500 Sobic003G187500 Sobic010G151900--Sobic003G187500 Sobic008G014500 Sobic008G014500 Sobic010G151900--Sobic008G014500 Sobic006G195700 Sobic006G195700 Sobic010G151900--Sobic006G195700 Sobic005G027400 Sobic005G027400 Sobic010G151900--Sobic005G027400 Sobic001G267900--Sobic010G056000 Sobic006G165000 Sobic006G165000 Sobic001G267900--Sobic006G165000 Sobic003G084900 Sobic003G084900 Sobic001G267900--Sobic003G084900 Sobic010G028800 Sobic010G028800 Sobic001G267900--Sobic010G028800 Sobic001G518400 Sobic001G518400 Sobic001G267900--Sobic001G518400 Sobic003G241200 Sobic003G241200 Sobic001G267900--Sobic003G241200 Sobic001G094000 Sobic001G094000 Sobic001G267900--Sobic001G094000 Sobic006G222300 Sobic006G222300 Sobic001G267900--Sobic006G222300 Sobic001G362200 Sobic001G362200 Sobic001G267900--Sobic001G362200 Sobic004G084300 Sobic004G084300 Sobic007G132400--Sobic004G084300 Sobic007G132400--Sobic003G241200 Sobic008G067600 Sobic008G067600 Sobic007G132400--Sobic008G067600 Sobic007G104800 Sobic007G104800 Sobic007G132400--Sobic007G104800 Sobic003G220200 Sobic003G220200 Sobic007G132400--Sobic003G220200 Sobic001G107500 Sobic001G107500 Sobic007G132400--Sobic001G107500 Sobic003G081000 Sobic003G081000 Sobic007G132400--Sobic003G081000 Sobic002G320500 Sobic002G320500 Sobic007G132400--Sobic002G320500 Sobic002G310200 Sobic002G310200 Sobic007G132400--Sobic002G310200 Sobic002G144933 Sobic002G144933 Sobic005G195800--Sobic002G144933 Sobic005G195800--Sobic001G094000 Sobic002G157000 Sobic002G157000 Sobic005G195800--Sobic002G157000 Sobic003G170100 Sobic003G170100 Sobic005G195800--Sobic003G170100 Sobic001G420200 Sobic001G420200 Sobic005G195800--Sobic001G420200 Sobic001G303675 Sobic001G303675 Sobic005G195800--Sobic001G303675 Sobic008G173900 Sobic008G173900 Sobic005G195800--Sobic008G173900 Sobic009G178800 Sobic009G178800 Sobic005G195800--Sobic009G178800 Sobic003G268300 Sobic003G268300 Sobic005G195800--Sobic003G268300 Sobic002G051450 Sobic002G051450 Sobic009G045700--Sobic002G051450 Sobic006G009400 Sobic006G009400 Sobic009G045700--Sobic006G009400 Sobic006G262200 Sobic006G262200 Sobic009G045700--Sobic006G262200 Sobic009G004700 Sobic009G004700 Sobic009G045700--Sobic009G004700 Sobic010G263800 Sobic010G263800 Sobic009G045700--Sobic010G263800 Sobic010G144100 Sobic010G144100 Sobic009G045700--Sobic010G144100 Sobic008G034600 Sobic008G034600 Sobic009G045700--Sobic008G034600 Sobic002G144966 Sobic002G144966 Sobic009G045700--Sobic002G144966 Sobic008G153600 Sobic008G153600 Sobic009G045700--Sobic008G153600 Sobic001G298600--Sobic007G132400 Sobic006G228500 Sobic006G228500 Sobic001G298600--Sobic006G228500 Sobic004G121100 Sobic004G121100 Sobic001G298600--Sobic004G121100 Sobic001G298600--Sobic001G107500 Sobic001G298600--Sobic002G310200 Sobic006G273200 Sobic006G273200 Sobic001G298600--Sobic006G273200 Sobic009G215800 Sobic009G215800 Sobic001G298600--Sobic009G215800 Sobic003G176600 Sobic003G176600 Sobic001G298600--Sobic003G176600 Sobic001G281600 Sobic001G281600 Sobic001G298600--Sobic001G281600 Sobic001G219600 Sobic001G219600 Sobic008G011100--Sobic001G219600 Sobic004G039200 Sobic004G039200 Sobic008G011100--Sobic004G039200 Sobic004G087600 Sobic004G087600 Sobic008G011100--Sobic004G087600 Sobic002G031400 Sobic002G031400 Sobic008G011100--Sobic002G031400 Sobic009G260500 Sobic009G260500 Sobic008G011100--Sobic009G260500 Sobic004G018300 Sobic004G018300 Sobic008G011100--Sobic004G018300 Sobic001G167200 Sobic001G167200 Sobic008G011100--Sobic001G167200 Sobic009G065100 Sobic009G065100 Sobic008G011100--Sobic009G065100 Sobic001G311500 Sobic001G311500 Sobic008G011100--Sobic001G311500 Sobic001G111900 Sobic001G111900 Sobic010G056000--Sobic001G111900 Sobic010G056000--Sobic003G084900 Sobic010G056000--Sobic010G028800 Sobic009G127900 Sobic009G127900 Sobic010G056000--Sobic009G127900 Sobic003G087400 Sobic003G087400 Sobic010G056000--Sobic003G087400 Sobic003G187400 Sobic003G187400 Sobic010G056000--Sobic003G187400 Sobic005G077466 Sobic005G077466 Sobic010G056000--Sobic005G077466 Sobic010G056000--Sobic001G094000 Sobic002G157300 Sobic002G157300 Sobic010G056000--Sobic002G157300 Sobic009G024400 Sobic009G024400 Sobic001G124000--Sobic009G024400 Sobic001G124000--Sobic004G039200 Sobic008G113100 Sobic008G113100 Sobic001G124000--Sobic008G113100 Sobic004G208900 Sobic004G208900 Sobic001G124000--Sobic004G208900 Sobic001G227200 Sobic001G227200 Sobic001G124000--Sobic001G227200 Sobic007G117400 Sobic007G117400 Sobic001G124000--Sobic007G117400 Sobic001G124000--Sobic009G065100 Sobic010G277500 Sobic010G277500 Sobic001G124000--Sobic010G277500 Sobic001G124000--Sobic008G011100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.