Gene annotation
Transcriptome id Sobic.001G282700.1
Synonym Sb01g027810
Functional annotation early-responsive to dehydration protein-related, putative, expressed
UniProt C5WQN2
Pfam PF14703 PF13967 PF02714
Panther DB PTHR13018 PTHR13018:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G32090 : early-responsive to dehydration stress protein (ERD4)
RAP-DB (Rice) LOC_Os10g42820.1 : early-responsive to dehydration protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a043751 , Zm00025a003570
Brachypodium KQJ97993
Barley HORVU1Hr1G051200.7 , HORVU1Hr1G051200.6 , HORVU1Hr1G051200.5 , HORVU1Hr1G051200.4 , HORVU1Hr1G051200.3 , HORVU1Hr1G051200.2 , HORVU1Hr1G051200.1 , HORVU1Hr1G051200.9 , HORVU1Hr1G051200.8
Wheat TraesCS1B02G211400 , TraesCS1D02G200300 , TraesCS1A02G196800
Populus -


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cDNA sequences
Sobic.001G282700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
2 Sobic.009G030400 eyes absent homolog 4, putative, expressed -
3 Sobic.003G428200 MEMO1, putative, expressed K06990: MEMO1 family protein
4 Sobic.007G065500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
5 Sobic.006G259401 - K06130: lysophospholipase II
6 Sobic.009G234800 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
7 Sobic.005G197100 acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
8 Sobic.004G282100 peptidase, putative, expressed K06013: STE24 endopeptidase
9 Sobic.001G456800 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
10 Sobic.003G033000 DIRP family protein, putative, expressed -
11 Sobic.001G289400 expressed protein -
12 Sobic.008G084600 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
13 Sobic.010G088300 serine/threonine-protein phosphatase 2A activator 2, putative, expressed K17605: PPP2R4, serine/threonine-protein phosphatase 2A activator
14 Sobic.002G252900 DNA repair ATPase-related, putative, expressed -
15 Sobic.001G395700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ proteins of unknown function domain containing protein, expressed -
16 Sobic.009G212600 expressed protein K00294: 1-pyrroline-5-carboxylate dehydrogenase
17 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
18 Sobic.003G226200 neutral ceramidase precursor, putative, expressed K12349: neutral ceramidase
19 Sobic.001G103300 calcium-transporting ATPase 3, endoplasmic reticulum-type, putative, expressed K05853: P-type Ca2+ transporter type 2A
20 Sobic.004G032800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3


Gene co-expression network
sample Sobic001G282700 Sobic001G282700 Sobic009G139800 Sobic009G139800 Sobic001G282700--Sobic009G139800 Sobic009G030400 Sobic009G030400 Sobic001G282700--Sobic009G030400 Sobic003G428200 Sobic003G428200 Sobic001G282700--Sobic003G428200 Sobic007G065500 Sobic007G065500 Sobic001G282700--Sobic007G065500 Sobic006G259401 Sobic006G259401 Sobic001G282700--Sobic006G259401 Sobic009G234800 Sobic009G234800 Sobic001G282700--Sobic009G234800 Sobic005G197100 Sobic005G197100 Sobic001G282700--Sobic005G197100 Sobic004G282100 Sobic004G282100 Sobic001G282700--Sobic004G282100 Sobic001G456800 Sobic001G456800 Sobic001G282700--Sobic001G456800 Sobic006G114400 Sobic006G114400 Sobic009G139800--Sobic006G114400 Sobic001G109300 Sobic001G109300 Sobic009G139800--Sobic001G109300 Sobic008G113600 Sobic008G113600 Sobic009G139800--Sobic008G113600 Sobic009G139800--Sobic003G428200 Sobic002G141700 Sobic002G141700 Sobic009G139800--Sobic002G141700 Sobic001G058100 Sobic001G058100 Sobic009G139800--Sobic001G058100 Sobic003G087000 Sobic003G087000 Sobic009G139800--Sobic003G087000 Sobic003G280300 Sobic003G280300 Sobic009G139800--Sobic003G280300 Sobic001G010700 Sobic001G010700 Sobic009G139800--Sobic001G010700 Sobic005G030100 Sobic005G030100 Sobic009G030400--Sobic005G030100 Sobic009G002000 Sobic009G002000 Sobic009G030400--Sobic009G002000 Sobic001G067000 Sobic001G067000 Sobic009G030400--Sobic001G067000 Sobic003G161800 Sobic003G161800 Sobic009G030400--Sobic003G161800 Sobic008G160500 Sobic008G160500 Sobic009G030400--Sobic008G160500 Sobic002G390400 Sobic002G390400 Sobic009G030400--Sobic002G390400 Sobic010G141600 Sobic010G141600 Sobic009G030400--Sobic010G141600 Sobic006G061100 Sobic006G061100 Sobic009G030400--Sobic006G061100 Sobic009G055600 Sobic009G055600 Sobic009G030400--Sobic009G055600 Sobic009G117200 Sobic009G117200 Sobic003G428200--Sobic009G117200 Sobic004G204800 Sobic004G204800 Sobic003G428200--Sobic004G204800 Sobic003G428200--Sobic001G010700 Sobic003G428200--Sobic009G139800 Sobic007G076300 Sobic007G076300 Sobic003G428200--Sobic007G076300 Sobic003G428200--Sobic001G109300 Sobic009G093200 Sobic009G093200 Sobic003G428200--Sobic009G093200 Sobic002G257400 Sobic002G257400 Sobic003G428200--Sobic002G257400 Sobic007G176200 Sobic007G176200 Sobic003G428200--Sobic007G176200 Sobic006G220500 Sobic006G220500 Sobic007G065500--Sobic006G220500 Sobic007G120800 Sobic007G120800 Sobic007G065500--Sobic007G120800 Sobic002G194800 Sobic002G194800 Sobic007G065500--Sobic002G194800 Sobic007G065500--Sobic006G259401 Sobic007G065500--Sobic009G139800 Sobic003G432100 Sobic003G432100 Sobic007G065500--Sobic003G432100 Sobic007G065500--Sobic009G234800 Sobic007G065500--Sobic003G428200 Sobic001G000400 Sobic001G000400 Sobic007G065500--Sobic001G000400 Sobic003G045600 Sobic003G045600 Sobic006G259401--Sobic003G045600 Sobic008G151500 Sobic008G151500 Sobic006G259401--Sobic008G151500 Sobic003G236800 Sobic003G236800 Sobic006G259401--Sobic003G236800 Sobic002G101300 Sobic002G101300 Sobic006G259401--Sobic002G101300 Sobic006G259401--Sobic007G120800 Sobic001G140000 Sobic001G140000 Sobic006G259401--Sobic001G140000 Sobic002G283100 Sobic002G283100 Sobic006G259401--Sobic002G283100 Sobic001G392200 Sobic001G392200 Sobic006G259401--Sobic001G392200 Sobic007G179900 Sobic007G179900 Sobic006G259401--Sobic007G179900 Sobic005G079900 Sobic005G079900 Sobic009G234800--Sobic005G079900 Sobic003G226200 Sobic003G226200 Sobic009G234800--Sobic003G226200 Sobic006G119200 Sobic006G119200 Sobic009G234800--Sobic006G119200 Sobic005G231900 Sobic005G231900 Sobic009G234800--Sobic005G231900 Sobic001G488500 Sobic001G488500 Sobic009G234800--Sobic001G488500 Sobic001G512800 Sobic001G512800 Sobic009G234800--Sobic001G512800 Sobic004G246200 Sobic004G246200 Sobic009G234800--Sobic004G246200 Sobic010G016400 Sobic010G016400 Sobic009G234800--Sobic010G016400 Sobic007G041400 Sobic007G041400 Sobic009G234800--Sobic007G041400 Sobic009G166600 Sobic009G166600 Sobic005G197100--Sobic009G166600 Sobic009G212600 Sobic009G212600 Sobic005G197100--Sobic009G212600 Sobic004G160700 Sobic004G160700 Sobic005G197100--Sobic004G160700 Sobic002G292900 Sobic002G292900 Sobic005G197100--Sobic002G292900 Sobic001G005600 Sobic001G005600 Sobic005G197100--Sobic001G005600 Sobic003G150900 Sobic003G150900 Sobic005G197100--Sobic003G150900 Sobic002G313900 Sobic002G313900 Sobic005G197100--Sobic002G313900 Sobic008G021000 Sobic008G021000 Sobic005G197100--Sobic008G021000 Sobic006G139100 Sobic006G139100 Sobic005G197100--Sobic006G139100 Sobic004G282100--Sobic006G139100 Sobic003G121600 Sobic003G121600 Sobic004G282100--Sobic003G121600 Sobic007G117800 Sobic007G117800 Sobic004G282100--Sobic007G117800 Sobic004G154300 Sobic004G154300 Sobic004G282100--Sobic004G154300 Sobic003G148900 Sobic003G148900 Sobic004G282100--Sobic003G148900 Sobic008G162000 Sobic008G162000 Sobic004G282100--Sobic008G162000 Sobic001G458200 Sobic001G458200 Sobic004G282100--Sobic001G458200 Sobic006G095200 Sobic006G095200 Sobic004G282100--Sobic006G095200 Sobic004G282100--Sobic003G150900 Sobic003G046300 Sobic003G046300 Sobic001G456800--Sobic003G046300 Sobic005G175000 Sobic005G175000 Sobic001G456800--Sobic005G175000 Sobic006G188500 Sobic006G188500 Sobic001G456800--Sobic006G188500 Sobic008G024800 Sobic008G024800 Sobic001G456800--Sobic008G024800 Sobic008G118500 Sobic008G118500 Sobic001G456800--Sobic008G118500 Sobic001G469200 Sobic001G469200 Sobic001G456800--Sobic001G469200 Sobic002G199400 Sobic002G199400 Sobic001G456800--Sobic002G199400 Sobic006G087100 Sobic006G087100 Sobic001G456800--Sobic006G087100 Sobic008G017200 Sobic008G017200 Sobic001G456800--Sobic008G017200
Octagon: transcription factors


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