Gene annotation
Transcriptome id Sobic.001G383500.2
Synonym Sb01g036370
Functional annotation expressed protein
UniProt C5X1N1
Pfam PF08571
Panther DB PTHR15858 PTHR15858:SF0
NCBI CDD KOG4779; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37975 : Yos1-like protein
RAP-DB (Rice) LOC_Os03g21390.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK15103
Barley HORVU4Hr1G050960.4 , HORVU4Hr1G050960.5 , HORVU4Hr1G050960.6 , HORVU4Hr1G050960.7 , HORVU4Hr1G050960.1 , HORVU4Hr1G050960.2 , HORVU4Hr1G050960.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
2 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
3 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
4 Sobic.004G066600 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
5 Sobic.009G230100 expressed protein -
6 Sobic.002G034500 ERD4 protein, putative, expressed -
7 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
8 Sobic.001G445800 expressed protein -
9 Sobic.001G077000 similar to Cold acclimation protein COR413-PM1(PubMedID : 29862293)@cold acclimation protein WCOR413, putative, expressed -
10 Sobic.003G344600 BAG domain containing protein, expressed -
11 Sobic.009G069700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Transcriptional repressor(PubMedID : 30367619)@OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
12 Sobic.003G050400 phospholipase D, putative, expressed K01115: phospholipase D1/2
13 Sobic.002G386800 protein kinase domain containing protein, expressed -
14 Sobic.001G309500 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
15 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
16 Sobic.001G526100 uncharacterized Cys-rich domain containing protein, putative, expressed -
17 Sobic.004G308400 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
18 Sobic.010G274900 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
19 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
20 Sobic.004G212900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -


Gene co-expression network
sample Sobic001G383500 Sobic001G383500 Sobic002G345300 Sobic002G345300 Sobic001G383500--Sobic002G345300 Sobic001G019900 Sobic001G019900 Sobic001G383500--Sobic001G019900 Sobic004G196300 Sobic004G196300 Sobic001G383500--Sobic004G196300 Sobic004G066600 Sobic004G066600 Sobic001G383500--Sobic004G066600 Sobic009G230100 Sobic009G230100 Sobic001G383500--Sobic009G230100 Sobic002G034500 Sobic002G034500 Sobic001G383500--Sobic002G034500 Sobic005G228000 Sobic005G228000 Sobic001G383500--Sobic005G228000 Sobic001G445800 Sobic001G445800 Sobic001G383500--Sobic001G445800 Sobic001G077000 Sobic001G077000 Sobic001G383500--Sobic001G077000 Sobic002G046100 Sobic002G046100 Sobic002G345300--Sobic002G046100 Sobic003G350300 Sobic003G350300 Sobic002G345300--Sobic003G350300 Sobic001G281400 Sobic001G281400 Sobic002G345300--Sobic001G281400 Sobic010G178200 Sobic010G178200 Sobic002G345300--Sobic010G178200 Sobic002G267500 Sobic002G267500 Sobic002G345300--Sobic002G267500 Sobic003G253000 Sobic003G253000 Sobic002G345300--Sobic003G253000 Sobic003G285800 Sobic003G285800 Sobic002G345300--Sobic003G285800 Sobic004G272800 Sobic004G272800 Sobic002G345300--Sobic004G272800 Sobic010G149300 Sobic010G149300 Sobic002G345300--Sobic010G149300 Sobic001G067601 Sobic001G067601 Sobic001G019900--Sobic001G067601 Sobic001G019900--Sobic005G228000 Sobic009G023200 Sobic009G023200 Sobic001G019900--Sobic009G023200 Sobic001G019900--Sobic003G350300 Sobic003G249800 Sobic003G249800 Sobic001G019900--Sobic003G249800 Sobic001G019900--Sobic002G046100 Sobic001G019900--Sobic001G445800 Sobic002G212200 Sobic002G212200 Sobic001G019900--Sobic002G212200 Sobic003G321700 Sobic003G321700 Sobic001G019900--Sobic003G321700 Sobic010G018400 Sobic010G018400 Sobic004G196300--Sobic010G018400 Sobic004G196300--Sobic003G249800 Sobic001G309500 Sobic001G309500 Sobic004G196300--Sobic001G309500 Sobic001G034700 Sobic001G034700 Sobic004G196300--Sobic001G034700 Sobic003G155400 Sobic003G155400 Sobic004G196300--Sobic003G155400 Sobic002G078400 Sobic002G078400 Sobic004G196300--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic004G196300--Sobic006G182100 Sobic004G066800 Sobic004G066800 Sobic004G196300--Sobic004G066800 Sobic010G153100 Sobic010G153100 Sobic004G196300--Sobic010G153100 Sobic010G239500 Sobic010G239500 Sobic004G066600--Sobic010G239500 Sobic002G176100 Sobic002G176100 Sobic004G066600--Sobic002G176100 Sobic004G066600--Sobic002G345300 Sobic004G101300 Sobic004G101300 Sobic004G066600--Sobic004G101300 Sobic003G319500 Sobic003G319500 Sobic004G066600--Sobic003G319500 Sobic003G429000 Sobic003G429000 Sobic004G066600--Sobic003G429000 Sobic007G087200 Sobic007G087200 Sobic004G066600--Sobic007G087200 Sobic005G188100 Sobic005G188100 Sobic004G066600--Sobic005G188100 Sobic002G190900 Sobic002G190900 Sobic004G066600--Sobic002G190900 Sobic004G144500 Sobic004G144500 Sobic009G230100--Sobic004G144500 Sobic009G077800 Sobic009G077800 Sobic009G230100--Sobic009G077800 Sobic009G230100--Sobic007G087200 Sobic004G166700 Sobic004G166700 Sobic009G230100--Sobic004G166700 Sobic003G393700 Sobic003G393700 Sobic009G230100--Sobic003G393700 Sobic009G230100--Sobic002G345300 Sobic010G268400 Sobic010G268400 Sobic009G230100--Sobic010G268400 Sobic009G230100--Sobic004G101300 Sobic003G417350 Sobic003G417350 Sobic009G230100--Sobic003G417350 Sobic003G021500 Sobic003G021500 Sobic002G034500--Sobic003G021500 Sobic002G373001 Sobic002G373001 Sobic002G034500--Sobic002G373001 Sobic002G082600 Sobic002G082600 Sobic002G034500--Sobic002G082600 Sobic002G034500--Sobic005G228000 Sobic001G234300 Sobic001G234300 Sobic002G034500--Sobic001G234300 Sobic002G034500--Sobic001G019900 Sobic001G449700 Sobic001G449700 Sobic002G034500--Sobic001G449700 Sobic002G092801 Sobic002G092801 Sobic002G034500--Sobic002G092801 Sobic002G312400 Sobic002G312400 Sobic002G034500--Sobic002G312400 Sobic005G228000--Sobic001G019900 Sobic005G228000--Sobic002G212200 Sobic005G228000--Sobic001G067601 Sobic005G228000--Sobic002G345300 Sobic005G228000--Sobic009G023200 Sobic004G157000 Sobic004G157000 Sobic005G228000--Sobic004G157000 Sobic005G228000--Sobic003G350300 Sobic009G094450 Sobic009G094450 Sobic005G228000--Sobic009G094450 Sobic010G047400 Sobic010G047400 Sobic005G228000--Sobic010G047400 Sobic008G129400 Sobic008G129400 Sobic001G445800--Sobic008G129400 Sobic001G445800--Sobic003G321700 Sobic001G445800--Sobic002G078400 Sobic001G445800--Sobic003G249800 Sobic001G445800--Sobic002G046100 Sobic001G445800--Sobic010G018400 Sobic010G154700 Sobic010G154700 Sobic001G445800--Sobic010G154700 Sobic001G445800--Sobic001G019900 Sobic001G445800--Sobic002G190900 Sobic003G072300 Sobic003G072300 Sobic001G077000--Sobic003G072300 Sobic002G418400 Sobic002G418400 Sobic001G077000--Sobic002G418400 Sobic001G077000--Sobic003G155400 Sobic003G209000 Sobic003G209000 Sobic001G077000--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic001G077000--Sobic002G296200 Sobic006G083500 Sobic006G083500 Sobic001G077000--Sobic006G083500 Sobic003G215700 Sobic003G215700 Sobic001G077000--Sobic003G215700 Sobic004G060500 Sobic004G060500 Sobic001G077000--Sobic004G060500 Sobic003G296800 Sobic003G296800 Sobic001G077000--Sobic003G296800
Octagon: transcription factors


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