Gene annotation
Transcriptome id Sobic.001G390900.1,Sobic.001G390900.2
Synonym Sb01g037060, G6PD4
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed
UniProt A0A1Z5S9T0 , C5X1U9
Pfam PF00479 PF02781
Panther DB PTHR23429 PTHR23429:SF4
NCBI CDD -
KEGG Orthology K00036; G6PD, glucose-6-phosphate 1-dehydrogenase
Gene Ontology GO:0006006; glucose metabolic process GO:0004345glucose-6-phosphate dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT1G09420 : glucose-6-phosphate dehydrogenase 4
RAP-DB (Rice) LOC_Os03g20300.1 : glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a052520
Brachypodium KQK21936 , KQK21937
Barley HORVU4Hr1G052350.19 , HORVU4Hr1G052350.18 , HORVU4Hr1G052350.4 , HORVU4Hr1G052350.15 , HORVU4Hr1G052350.14 , HORVU4Hr1G052350.17 , HORVU4Hr1G052350.16 , HORVU4Hr1G052350.11 , HORVU4Hr1G052350.10 , HORVU4Hr1G052350.13 , HORVU4Hr1G052350.12 , HORVU4Hr1G052350.2 , HORVU4Hr1G052350.6 , HORVU4Hr1G052350.9 , HORVU4Hr1G052350.8 , HORVU4Hr1G052350.3 , HORVU4Hr1G052350.5 , HORVU4Hr1G052350.7
Wheat TraesCS4A02G126200 , TraesCS4A02G126200 , TraesCS4A02G126200 , TraesCS4D02G180300 , TraesCS4D02G180300 , TraesCS4B02G178700
Populus -


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cDNA sequences
Sobic.001G390900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G419800 pentatricopeptide repeat protein PPR1106-17, putative, expressed -
2 Sobic.001G001200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.003G051500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
4 Sobic.010G099300 - K03501: gidB, 16S rRNA (guanine527-N7)-methyltransferase
5 Sobic.001G081300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.010G083900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsPOP12 - Putative Prolyl Oligopeptidase homologue, expressed -
7 Sobic.001G322600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.005G028300 Rf1, mitochondrial precursor, putative, expressed -
9 Sobic.002G240900 pentatricopeptide, putative, expressed -
10 Sobic.006G126300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
11 Sobic.001G391101 - -
12 Sobic.001G158400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@recA protein, putative, expressed K03553: recombination protein RecA
13 Sobic.002G423400 PPR repeat containing protein, expressed -
14 Sobic.003G123200 la domain containing protein, putative, expressed K18757: la-related protein 1
15 Sobic.001G049800 DDT domain containing protein, putative, expressed -
16 Sobic.003G014700 pentatricopeptide, putative, expressed -
17 Sobic.001G544300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA methyltransferase, TrmH family protein, putative, expressed -
18 Sobic.001G040600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA topoisomerase 2, putative, expressed K02469: DNA gyrase subunit A
19 Sobic.001G027100 FEN1A - Putative flap endonuclease protein, expressed K04799: FEN1, flap endonuclease-1
20 Sobic.007G179600 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic001G390900 Sobic001G390900 Sobic003G419800 Sobic003G419800 Sobic001G390900--Sobic003G419800 Sobic001G001200 Sobic001G001200 Sobic001G390900--Sobic001G001200 Sobic003G051500 Sobic003G051500 Sobic001G390900--Sobic003G051500 Sobic010G099300 Sobic010G099300 Sobic001G390900--Sobic010G099300 Sobic001G081300 Sobic001G081300 Sobic001G390900--Sobic001G081300 Sobic010G083900 Sobic010G083900 Sobic001G390900--Sobic010G083900 Sobic001G322600 Sobic001G322600 Sobic001G390900--Sobic001G322600 Sobic005G028300 Sobic005G028300 Sobic001G390900--Sobic005G028300 Sobic002G240900 Sobic002G240900 Sobic001G390900--Sobic002G240900 Sobic003G419800--Sobic005G028300 Sobic003G419800--Sobic001G001200 Sobic007G179600 Sobic007G179600 Sobic003G419800--Sobic007G179600 Sobic003G419800--Sobic001G081300 Sobic003G419800--Sobic003G051500 Sobic001G391101 Sobic001G391101 Sobic003G419800--Sobic001G391101 Sobic003G419800--Sobic001G390900 Sobic003G014700 Sobic003G014700 Sobic003G419800--Sobic003G014700 Sobic007G182600 Sobic007G182600 Sobic003G419800--Sobic007G182600 Sobic001G001200--Sobic003G051500 Sobic001G001200--Sobic005G028300 Sobic001G001200--Sobic003G419800 Sobic001G001200--Sobic001G391101 Sobic001G001200--Sobic001G390900 Sobic003G183900 Sobic003G183900 Sobic001G001200--Sobic003G183900 Sobic001G001200--Sobic001G081300 Sobic001G001200--Sobic007G179600 Sobic001G001200--Sobic010G083900 Sobic003G051500--Sobic001G391101 Sobic003G051500--Sobic001G001200 Sobic003G051500--Sobic005G028300 Sobic001G040600 Sobic001G040600 Sobic003G051500--Sobic001G040600 Sobic003G051500--Sobic001G081300 Sobic003G051500--Sobic003G419800 Sobic003G051500--Sobic007G182600 Sobic003G051500--Sobic010G099300 Sobic004G217900 Sobic004G217900 Sobic003G051500--Sobic004G217900 Sobic010G099300--Sobic001G040600 Sobic010G099300--Sobic007G182600 Sobic007G060600 Sobic007G060600 Sobic010G099300--Sobic007G060600 Sobic010G099300--Sobic001G081300 Sobic001G437801 Sobic001G437801 Sobic010G099300--Sobic001G437801 Sobic001G049800 Sobic001G049800 Sobic010G099300--Sobic001G049800 Sobic010G099300--Sobic003G051500 Sobic001G395300 Sobic001G395300 Sobic010G099300--Sobic001G395300 Sobic006G271900 Sobic006G271900 Sobic010G099300--Sobic006G271900 Sobic001G081300--Sobic001G391101 Sobic001G081300--Sobic007G179600 Sobic001G347100 Sobic001G347100 Sobic001G081300--Sobic001G347100 Sobic009G238700 Sobic009G238700 Sobic001G081300--Sobic009G238700 Sobic001G081300--Sobic003G051500 Sobic001G081300--Sobic003G419800 Sobic001G081300--Sobic007G060600 Sobic001G081300--Sobic001G049800 Sobic001G081300--Sobic010G099300 Sobic002G378100 Sobic002G378100 Sobic010G083900--Sobic002G378100 Sobic010G083900--Sobic001G322600 Sobic010G083900--Sobic001G049800 Sobic001G422500 Sobic001G422500 Sobic010G083900--Sobic001G422500 Sobic010G224700 Sobic010G224700 Sobic010G083900--Sobic010G224700 Sobic004G151000 Sobic004G151000 Sobic010G083900--Sobic004G151000 Sobic010G083900--Sobic003G014700 Sobic010G083900--Sobic005G028300 Sobic001G119600 Sobic001G119600 Sobic010G083900--Sobic001G119600 Sobic001G322600--Sobic010G083900 Sobic009G163600 Sobic009G163600 Sobic001G322600--Sobic009G163600 Sobic002G344500 Sobic002G344500 Sobic001G322600--Sobic002G344500 Sobic001G322600--Sobic003G014700 Sobic004G354000 Sobic004G354000 Sobic001G322600--Sobic004G354000 Sobic001G322600--Sobic010G224700 Sobic003G407600 Sobic003G407600 Sobic001G322600--Sobic003G407600 Sobic001G322600--Sobic005G028300 Sobic001G322600--Sobic002G378100 Sobic002G389200 Sobic002G389200 Sobic005G028300--Sobic002G389200 Sobic005G028300--Sobic003G051500 Sobic002G251800 Sobic002G251800 Sobic005G028300--Sobic002G251800 Sobic005G028300--Sobic001G001200 Sobic005G028300--Sobic003G419800 Sobic005G028300--Sobic003G014700 Sobic005G028300--Sobic001G391101 Sobic002G084400 Sobic002G084400 Sobic005G028300--Sobic002G084400 Sobic005G028300--Sobic010G083900 Sobic001G149100 Sobic001G149100 Sobic002G240900--Sobic001G149100 Sobic002G240900--Sobic003G419800 Sobic002G240900--Sobic002G389200 Sobic003G014766 Sobic003G014766 Sobic002G240900--Sobic003G014766 Sobic005G059400 Sobic005G059400 Sobic002G240900--Sobic005G059400 Sobic002G240900--Sobic003G051500 Sobic002G240900--Sobic001G001200 Sobic002G240900--Sobic005G028300 Sobic002G240900--Sobic001G390900
Octagon: transcription factors


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