Gene annotation
Transcriptome id Sobic.001G403400.1
Synonym Sb01g038160
Functional annotation malonyl CoA-acyl carrier protein transacylase, mitochondrial precursor, putative, expressed
UniProt C5WNG2
Pfam PF00698
Panther DB PTHR10982
NCBI CDD KOG2926; Malonyl-CoA:ACP transacylase
KEGG Orthology K00645; fabD, MCAT, [acyl-carrier-protein] S-malonyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30200 : catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding
RAP-DB (Rice) LOC_Os03g18590.1 : malonyl CoA-acyl carrier protein transacylase, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a002039
Brachypodium KQK22090
Barley HORVU4Hr1G055240.4 , HORVU4Hr1G055240.2 , HORVU4Hr1G055240.3 , HORVU4Hr1G055240.1
Wheat TraesCS4D02G191300 , TraesCS4D02G191300 , TraesCS4B02G189900 , TraesCS4B02G189900 , TraesCS4A02G114200
Populus -


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cDNA sequences
Sobic.001G403400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G195700 hydrolase, alpha/beta fold family domain containing protein, expressed K01259: proline iminopeptidase
2 Sobic.003G408300 WD domain, G-beta repeat domain containing protein, expressed K14791: periodic tryptophan protein 1
3 Sobic.010G141600 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K00122: formate dehydrogenase
4 Sobic.010G073500 3-oxoacyl-synthase, putative, expressed K09458: fabF, OXSM, 3-oxoacyl-[acyl-carrier-protein] synthase II
5 Sobic.006G043700 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
6 Sobic.001G382200 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
7 Sobic.009G258500 notchless protein, putative, expressed K14855: RSA4, ribosome assembly protein 4
8 Sobic.009G113900 expressed protein -
9 Sobic.003G122800 translin, putative, expressed -
10 Sobic.003G198300 ZOS1-11 - C2H2 zinc finger protein, expressed K15263: cell growth-regulating nucleolar protein
11 Sobic.008G016100 WD domain, G-beta repeat domain containing protein, expressed K14848: RRB1, ribosome assembly protein RRB1
12 Sobic.002G263200 expressed protein -
13 Sobic.002G208400 regulator protein, putative, expressed -
14 Sobic.002G155100 bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed K12524: bifunctional aspartokinase / homoserine dehydrogenase 1
15 Sobic.002G256800 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A
16 Sobic.007G092200 aspartate carbamoyltransferase, putative, expressed K00609: pyrB, aspartate carbamoyltransferase catalytic subunit
17 Sobic.003G008600 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed K15029: translation initiation factor 3 subunit L
18 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
19 Sobic.008G059900 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
20 Sobic.009G052200 dihydrolipoyl dehydrogenase, putative, expressed K00382: DLD, lpd, dihydrolipoamide dehydrogenase


Gene co-expression network
sample Sobic001G403400 Sobic001G403400 Sobic009G195700 Sobic009G195700 Sobic001G403400--Sobic009G195700 Sobic003G408300 Sobic003G408300 Sobic001G403400--Sobic003G408300 Sobic010G141600 Sobic010G141600 Sobic001G403400--Sobic010G141600 Sobic010G073500 Sobic010G073500 Sobic001G403400--Sobic010G073500 Sobic006G043700 Sobic006G043700 Sobic001G403400--Sobic006G043700 Sobic001G382200 Sobic001G382200 Sobic001G403400--Sobic001G382200 Sobic009G258500 Sobic009G258500 Sobic001G403400--Sobic009G258500 Sobic009G113900 Sobic009G113900 Sobic001G403400--Sobic009G113900 Sobic003G122800 Sobic003G122800 Sobic001G403400--Sobic003G122800 Sobic004G247100 Sobic004G247100 Sobic009G195700--Sobic004G247100 Sobic006G212900 Sobic006G212900 Sobic009G195700--Sobic006G212900 Sobic002G142700 Sobic002G142700 Sobic009G195700--Sobic002G142700 Sobic009G195700--Sobic001G403400 Sobic002G116500 Sobic002G116500 Sobic009G195700--Sobic002G116500 Sobic008G059900 Sobic008G059900 Sobic009G195700--Sobic008G059900 Sobic001G004100 Sobic001G004100 Sobic009G195700--Sobic001G004100 Sobic009G195700--Sobic010G073500 Sobic010G172400 Sobic010G172400 Sobic009G195700--Sobic010G172400 Sobic008G016100 Sobic008G016100 Sobic003G408300--Sobic008G016100 Sobic002G263200 Sobic002G263200 Sobic003G408300--Sobic002G263200 Sobic007G187900 Sobic007G187900 Sobic003G408300--Sobic007G187900 Sobic003G408300--Sobic002G116500 Sobic001G168100 Sobic001G168100 Sobic003G408300--Sobic001G168100 Sobic006G084000 Sobic006G084000 Sobic003G408300--Sobic006G084000 Sobic002G332200 Sobic002G332200 Sobic003G408300--Sobic002G332200 Sobic006G251500 Sobic006G251500 Sobic003G408300--Sobic006G251500 Sobic009G143800 Sobic009G143800 Sobic003G408300--Sobic009G143800 Sobic009G030400 Sobic009G030400 Sobic010G141600--Sobic009G030400 Sobic002G208400 Sobic002G208400 Sobic010G141600--Sobic002G208400 Sobic009G002000 Sobic009G002000 Sobic010G141600--Sobic009G002000 Sobic006G193500 Sobic006G193500 Sobic010G141600--Sobic006G193500 Sobic001G373000 Sobic001G373000 Sobic010G141600--Sobic001G373000 Sobic001G115500 Sobic001G115500 Sobic010G141600--Sobic001G115500 Sobic001G013300 Sobic001G013300 Sobic010G141600--Sobic001G013300 Sobic009G113100 Sobic009G113100 Sobic010G141600--Sobic009G113100 Sobic010G141600--Sobic002G263200 Sobic010G073500--Sobic008G059900 Sobic002G264300 Sobic002G264300 Sobic010G073500--Sobic002G264300 Sobic006G237000 Sobic006G237000 Sobic010G073500--Sobic006G237000 Sobic010G073500--Sobic009G195700 Sobic005G031000 Sobic005G031000 Sobic010G073500--Sobic005G031000 Sobic006G029400 Sobic006G029400 Sobic010G073500--Sobic006G029400 Sobic002G125800 Sobic002G125800 Sobic010G073500--Sobic002G125800 Sobic001G200200 Sobic001G200200 Sobic010G073500--Sobic001G200200 Sobic001G199500 Sobic001G199500 Sobic010G073500--Sobic001G199500 Sobic009G052200 Sobic009G052200 Sobic006G043700--Sobic009G052200 Sobic002G144275 Sobic002G144275 Sobic006G043700--Sobic002G144275 Sobic006G213400 Sobic006G213400 Sobic006G043700--Sobic006G213400 Sobic004G326600 Sobic004G326600 Sobic006G043700--Sobic004G326600 Sobic004G047200 Sobic004G047200 Sobic006G043700--Sobic004G047200 Sobic005G163700 Sobic005G163700 Sobic006G043700--Sobic005G163700 Sobic003G165101 Sobic003G165101 Sobic006G043700--Sobic003G165101 Sobic010G169700 Sobic010G169700 Sobic006G043700--Sobic010G169700 Sobic007G092200 Sobic007G092200 Sobic006G043700--Sobic007G092200 Sobic001G382200--Sobic009G258500 Sobic009G201800 Sobic009G201800 Sobic001G382200--Sobic009G201800 Sobic003G118400 Sobic003G118400 Sobic001G382200--Sobic003G118400 Sobic002G341800 Sobic002G341800 Sobic001G382200--Sobic002G341800 Sobic009G234400 Sobic009G234400 Sobic001G382200--Sobic009G234400 Sobic002G394600 Sobic002G394600 Sobic001G382200--Sobic002G394600 Sobic001G382200--Sobic008G016100 Sobic004G010700 Sobic004G010700 Sobic001G382200--Sobic004G010700 Sobic001G530800 Sobic001G530800 Sobic001G382200--Sobic001G530800 Sobic009G258500--Sobic001G382200 Sobic009G258500--Sobic004G010700 Sobic009G258500--Sobic009G201800 Sobic003G198300 Sobic003G198300 Sobic009G258500--Sobic003G198300 Sobic006G226500 Sobic006G226500 Sobic009G258500--Sobic006G226500 Sobic004G252000 Sobic004G252000 Sobic009G258500--Sobic004G252000 Sobic009G258500--Sobic004G047200 Sobic009G258500--Sobic008G016100 Sobic004G249300 Sobic004G249300 Sobic009G258500--Sobic004G249300 Sobic005G068800 Sobic005G068800 Sobic009G113900--Sobic005G068800 Sobic001G460100 Sobic001G460100 Sobic009G113900--Sobic001G460100 Sobic009G113900--Sobic001G199500 Sobic001G507000 Sobic001G507000 Sobic009G113900--Sobic001G507000 Sobic005G088900 Sobic005G088900 Sobic009G113900--Sobic005G088900 Sobic002G215200 Sobic002G215200 Sobic009G113900--Sobic002G215200 Sobic006G281900 Sobic006G281900 Sobic009G113900--Sobic006G281900 Sobic006G051000 Sobic006G051000 Sobic009G113900--Sobic006G051000 Sobic001G122100 Sobic001G122100 Sobic009G113900--Sobic001G122100 Sobic002G367200 Sobic002G367200 Sobic003G122800--Sobic002G367200 Sobic008G162100 Sobic008G162100 Sobic003G122800--Sobic008G162100 Sobic009G028100 Sobic009G028100 Sobic003G122800--Sobic009G028100 Sobic003G129300 Sobic003G129300 Sobic003G122800--Sobic003G129300 Sobic002G095300 Sobic002G095300 Sobic003G122800--Sobic002G095300 Sobic003G326500 Sobic003G326500 Sobic003G122800--Sobic003G326500 Sobic003G102700 Sobic003G102700 Sobic003G122800--Sobic003G102700 Sobic003G119900 Sobic003G119900 Sobic003G122800--Sobic003G119900 Sobic007G082000 Sobic007G082000 Sobic003G122800--Sobic007G082000
Octagon: transcription factors


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