Gene annotation
Transcriptome id Sobic.001G430500.1
Synonym DRP4C, Sb01g040490
Functional annotation dynamin family protein, putative, expressed
UniProt C5WQ89
Pfam PF02212 PF00350 PF01031
Panther DB PTHR11566 PTHR11566:SF45
NCBI CDD KOG0446; Vacuolar sorting protein VPS1, dynamin, and related proteins
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding GO:0003924GTPase activity


Orthologs (automatic annotation)
TAIR AT1G60500 : Dynamin related protein 4C
RAP-DB (Rice) LOC_Os03g15420.1 : dynamin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a001681 , Zm00025a001682
Brachypodium KQK22484
Barley HORVU4Hr1G061820.1 , HORVU4Hr1G061820.3 , HORVU4Hr1G061820.2
Wheat TraesCS4A02G086700 , TraesCS4B02G217700 , TraesCS4D02G217900 , TraesCS4A02G213700
Populus -


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cDNA sequences
Sobic.001G430500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G154300 DNA binding protein, putative, expressed -
2 Sobic.008G112100 Phospholipid synthesis protein 1 PLS1 (Zm)(PubMedID : 27208977)@acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
3 Sobic.010G188900 PPR repeat domain containing protein, putative, expressed -
4 Sobic.006G202800 - -
5 Sobic.004G043600 expressed protein -
6 Sobic.003G045000 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
7 Sobic.005G017200 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
8 Sobic.001G381500 lung seven transmembrane domain containing protein, putative, expressed -
9 Sobic.006G167100 - -
10 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
11 Sobic.006G095000 PPR repeat domain containing protein, putative, expressed -
12 Sobic.010G147500 tryptophan biosynthesis protein trpCF, putative, expressed K01817: phosphoribosylanthranilate isomerase
13 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
14 Sobic.002G108100 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
15 Sobic.007G189100 SFC, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
16 Sobic.002G182000 cwfJ-like family protein, putative, expressed -
17 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
18 Sobic.004G353300 growth regulator related protein, putative, expressed -
19 Sobic.009G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
20 Sobic.010G080900 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3


Gene co-expression network
sample Sobic001G430500 Sobic001G430500 Sobic001G154300 Sobic001G154300 Sobic001G430500--Sobic001G154300 Sobic008G112100 Sobic008G112100 Sobic001G430500--Sobic008G112100 Sobic010G188900 Sobic010G188900 Sobic001G430500--Sobic010G188900 Sobic006G202800 Sobic006G202800 Sobic001G430500--Sobic006G202800 Sobic004G043600 Sobic004G043600 Sobic001G430500--Sobic004G043600 Sobic003G045000 Sobic003G045000 Sobic001G430500--Sobic003G045000 Sobic005G017200 Sobic005G017200 Sobic001G430500--Sobic005G017200 Sobic001G381500 Sobic001G381500 Sobic001G430500--Sobic001G381500 Sobic006G167100 Sobic006G167100 Sobic001G430500--Sobic006G167100 Sobic001G154300--Sobic001G381500 Sobic004G328300 Sobic004G328300 Sobic001G154300--Sobic004G328300 Sobic001G361200 Sobic001G361200 Sobic001G154300--Sobic001G361200 Sobic001G023500 Sobic001G023500 Sobic001G154300--Sobic001G023500 Sobic002G192900 Sobic002G192900 Sobic001G154300--Sobic002G192900 Sobic004G306100 Sobic004G306100 Sobic001G154300--Sobic004G306100 Sobic001G248400 Sobic001G248400 Sobic001G154300--Sobic001G248400 Sobic002G308000 Sobic002G308000 Sobic001G154300--Sobic002G308000 Sobic006G127200 Sobic006G127200 Sobic001G154300--Sobic006G127200 Sobic009G054400 Sobic009G054400 Sobic008G112100--Sobic009G054400 Sobic003G397100 Sobic003G397100 Sobic008G112100--Sobic003G397100 Sobic007G036800 Sobic007G036800 Sobic008G112100--Sobic007G036800 Sobic007G010200 Sobic007G010200 Sobic008G112100--Sobic007G010200 Sobic001G433600 Sobic001G433600 Sobic008G112100--Sobic001G433600 Sobic008G087200 Sobic008G087200 Sobic008G112100--Sobic008G087200 Sobic002G123600 Sobic002G123600 Sobic008G112100--Sobic002G123600 Sobic004G293400 Sobic004G293400 Sobic008G112100--Sobic004G293400 Sobic008G112100--Sobic001G381500 Sobic010G188900--Sobic002G308000 Sobic010G188900--Sobic002G192900 Sobic010G253200 Sobic010G253200 Sobic010G188900--Sobic010G253200 Sobic008G132200 Sobic008G132200 Sobic010G188900--Sobic008G132200 Sobic010G188900--Sobic003G045000 Sobic003G075200 Sobic003G075200 Sobic010G188900--Sobic003G075200 Sobic010G080900 Sobic010G080900 Sobic010G188900--Sobic010G080900 Sobic001G352800 Sobic001G352800 Sobic010G188900--Sobic001G352800 Sobic008G104000 Sobic008G104000 Sobic010G188900--Sobic008G104000 Sobic008G192700 Sobic008G192700 Sobic006G202800--Sobic008G192700 Sobic010G049300 Sobic010G049300 Sobic006G202800--Sobic010G049300 Sobic004G256900 Sobic004G256900 Sobic006G202800--Sobic004G256900 Sobic002G172500 Sobic002G172500 Sobic006G202800--Sobic002G172500 Sobic005G076400 Sobic005G076400 Sobic006G202800--Sobic005G076400 Sobic008G148500 Sobic008G148500 Sobic006G202800--Sobic008G148500 Sobic003G184300 Sobic003G184300 Sobic006G202800--Sobic003G184300 Sobic008G084401 Sobic008G084401 Sobic006G202800--Sobic008G084401 Sobic010G053900 Sobic010G053900 Sobic006G202800--Sobic010G053900 Sobic003G113400 Sobic003G113400 Sobic004G043600--Sobic003G113400 Sobic003G167000 Sobic003G167000 Sobic004G043600--Sobic003G167000 Sobic001G203600 Sobic001G203600 Sobic004G043600--Sobic001G203600 Sobic007G207600 Sobic007G207600 Sobic004G043600--Sobic007G207600 Sobic003G112600 Sobic003G112600 Sobic004G043600--Sobic003G112600 Sobic003G142400 Sobic003G142400 Sobic004G043600--Sobic003G142400 Sobic007G226800 Sobic007G226800 Sobic004G043600--Sobic007G226800 Sobic001G343000 Sobic001G343000 Sobic004G043600--Sobic001G343000 Sobic003G190600 Sobic003G190600 Sobic004G043600--Sobic003G190600 Sobic008G085950 Sobic008G085950 Sobic003G045000--Sobic008G085950 Sobic008G047500 Sobic008G047500 Sobic003G045000--Sobic008G047500 Sobic003G045000--Sobic010G188900 Sobic003G045000--Sobic002G308000 Sobic007G043700 Sobic007G043700 Sobic003G045000--Sobic007G043700 Sobic003G194800 Sobic003G194800 Sobic003G045000--Sobic003G194800 Sobic007G105700 Sobic007G105700 Sobic003G045000--Sobic007G105700 Sobic002G390800 Sobic002G390800 Sobic003G045000--Sobic002G390800 Sobic009G120400 Sobic009G120400 Sobic003G045000--Sobic009G120400 Sobic003G314300 Sobic003G314300 Sobic005G017200--Sobic003G314300 Sobic001G097500 Sobic001G097500 Sobic005G017200--Sobic001G097500 Sobic001G356100 Sobic001G356100 Sobic005G017200--Sobic001G356100 Sobic009G128500 Sobic009G128500 Sobic005G017200--Sobic009G128500 Sobic005G114500 Sobic005G114500 Sobic005G017200--Sobic005G114500 Sobic001G193100 Sobic001G193100 Sobic005G017200--Sobic001G193100 Sobic004G078700 Sobic004G078700 Sobic005G017200--Sobic004G078700 Sobic002G290100 Sobic002G290100 Sobic005G017200--Sobic002G290100 Sobic003G230600 Sobic003G230600 Sobic005G017200--Sobic003G230600 Sobic001G381500--Sobic001G154300 Sobic001G381500--Sobic002G308000 Sobic001G381500--Sobic001G433600 Sobic007G189100 Sobic007G189100 Sobic001G381500--Sobic007G189100 Sobic002G193500 Sobic002G193500 Sobic001G381500--Sobic002G193500 Sobic009G080600 Sobic009G080600 Sobic001G381500--Sobic009G080600 Sobic010G269800 Sobic010G269800 Sobic001G381500--Sobic010G269800 Sobic002G392400 Sobic002G392400 Sobic001G381500--Sobic002G392400 Sobic001G381500--Sobic004G306100 Sobic005G045800 Sobic005G045800 Sobic006G167100--Sobic005G045800 Sobic006G167100--Sobic007G189100 Sobic002G414800 Sobic002G414800 Sobic006G167100--Sobic002G414800 Sobic001G131900 Sobic001G131900 Sobic006G167100--Sobic001G131900 Sobic006G167100--Sobic002G392400 Sobic003G200000 Sobic003G200000 Sobic006G167100--Sobic003G200000 Sobic006G167100--Sobic001G433600 Sobic006G167100--Sobic002G308000 Sobic006G116900 Sobic006G116900 Sobic006G167100--Sobic006G116900
Octagon: transcription factors


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