Gene annotation
Transcriptome id Sobic.001G446800.1
Synonym ZF14, Sb01g041970
Functional annotation MATE efflux family protein, putative, expressed
UniProt A0A1B6QPI8
Pfam PF01554
Panther DB PTHR11206 PTHR11206:SF92
NCBI CDD KOG1347; Uncharacterized membrane protein, predicted efflux pump
KEGG Orthology K03327; TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
Gene Ontology GO:0016020; membrane GO:0015297antiporter activity GO:0006855drug transmembrane transport


Orthologs (automatic annotation)
TAIR AT1G58340 : MATE efflux family protein
RAP-DB (Rice) LOC_Os03g12790.1 : MATE efflux family protein, putative, expressed
MaizeGDB (Corn) Zm00025a014386 , Zm00025a001421
Brachypodium PNT77806 , PNT77807 , KQJ84119 , KQK00755 , KQK22742 , KQK22741
Barley HORVU7Hr1G056760.2 , HORVU7Hr1G056760.1 , HORVU0Hr1G025760.4 , HORVU0Hr1G025760.5 , HORVU0Hr1G025760.2 , HORVU0Hr1G025760.3 , HORVU0Hr1G025760.1 , HORVU4Hr1G065660.9 , HORVU4Hr1G065660.8 , HORVU4Hr1G065660.7 , HORVU4Hr1G065660.6 , HORVU4Hr1G065660.5 , HORVU4Hr1G065660.4 , HORVU4Hr1G065660.3 , HORVU4Hr1G065660.2 , HORVU4Hr1G065660.1 , HORVU6Hr1G065390.1 , HORVU6Hr1G065390.3 , HORVU6Hr1G065390.2 , HORVU6Hr1G065390.5 , HORVU6Hr1G065390.4 , HORVU0Hr1G021690.2 , HORVU0Hr1G021690.1 , HORVU4Hr1G065660.14 , HORVU4Hr1G065660.13 , HORVU4Hr1G065660.12 , HORVU4Hr1G065660.11 , HORVU4Hr1G065660.10 , HORVU5Hr1G080470.1
Wheat TraesCS4B02G234800 , TraesCS4A02G059200 , TraesCS4D02G236000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G190000 tetratricopeptide repeat domain containing protein, expressed -
2 Sobic.003G035900 expressed protein -
3 Sobic.003G097500 - -
4 Sobic.002G159100 chlorophyll A-B binding protein, putative, expressed K14172: light-harvesting complex II chlorophyll a/b binding protein 7
5 Sobic.001G104600 expressed protein -
6 Sobic.006G226601 - -
7 Sobic.001G276300 peptide transporter PTR2, putative, expressed -
8 Sobic.010G245200 expressed protein -
9 Sobic.004G051100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
10 Sobic.002G370600 - -
11 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -
12 Sobic.001G104700 expressed protein -
13 Sobic.007G169100 glutathione S-transferase, N-terminal domain containing protein, expressed -
14 Sobic.001G122300 PAP fibrillin family domain containing protein, expressed -
15 Sobic.002G272700 cytochrome P450, putative, expressed -
16 Sobic.002G382800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
18 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
19 Sobic.005G202500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tropinone reductase 2, putative, expressed K08081: tropinone reductase I
20 Sobic.003G370000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyll A-B binding protein, putative, expressed K03542: photosystem II 22kDa protein


Gene co-expression network
sample Sobic001G446800 Sobic001G446800 Sobic009G190000 Sobic009G190000 Sobic001G446800--Sobic009G190000 Sobic003G035900 Sobic003G035900 Sobic001G446800--Sobic003G035900 Sobic003G097500 Sobic003G097500 Sobic001G446800--Sobic003G097500 Sobic002G159100 Sobic002G159100 Sobic001G446800--Sobic002G159100 Sobic001G104600 Sobic001G104600 Sobic001G446800--Sobic001G104600 Sobic006G226601 Sobic006G226601 Sobic001G446800--Sobic006G226601 Sobic001G276300 Sobic001G276300 Sobic001G446800--Sobic001G276300 Sobic010G245200 Sobic010G245200 Sobic001G446800--Sobic010G245200 Sobic004G051100 Sobic004G051100 Sobic001G446800--Sobic004G051100 Sobic002G279700 Sobic002G279700 Sobic009G190000--Sobic002G279700 Sobic001G033100 Sobic001G033100 Sobic009G190000--Sobic001G033100 Sobic006G013800 Sobic006G013800 Sobic009G190000--Sobic006G013800 Sobic009G190000--Sobic003G035900 Sobic003G022300 Sobic003G022300 Sobic009G190000--Sobic003G022300 Sobic005G202500 Sobic005G202500 Sobic009G190000--Sobic005G202500 Sobic008G171300 Sobic008G171300 Sobic009G190000--Sobic008G171300 Sobic009G190000--Sobic002G159100 Sobic006G261700 Sobic006G261700 Sobic009G190000--Sobic006G261700 Sobic003G035900--Sobic009G190000 Sobic007G069000 Sobic007G069000 Sobic003G035900--Sobic007G069000 Sobic003G373600 Sobic003G373600 Sobic003G035900--Sobic003G373600 Sobic001G222600 Sobic001G222600 Sobic003G035900--Sobic001G222600 Sobic001G057100 Sobic001G057100 Sobic003G035900--Sobic001G057100 Sobic003G035900--Sobic002G159100 Sobic005G004500 Sobic005G004500 Sobic003G035900--Sobic005G004500 Sobic010G047700 Sobic010G047700 Sobic003G035900--Sobic010G047700 Sobic003G035900--Sobic001G446800 Sobic003G328100 Sobic003G328100 Sobic003G097500--Sobic003G328100 Sobic007G169100 Sobic007G169100 Sobic003G097500--Sobic007G169100 Sobic003G097500--Sobic006G226601 Sobic004G006400 Sobic004G006400 Sobic003G097500--Sobic004G006400 Sobic006G140700 Sobic006G140700 Sobic003G097500--Sobic006G140700 Sobic003G097500--Sobic001G276300 Sobic003G097500--Sobic001G104600 Sobic007G053800 Sobic007G053800 Sobic003G097500--Sobic007G053800 Sobic001G517700 Sobic001G517700 Sobic003G097500--Sobic001G517700 Sobic004G124400 Sobic004G124400 Sobic002G159100--Sobic004G124400 Sobic002G200900 Sobic002G200900 Sobic002G159100--Sobic002G200900 Sobic001G220000 Sobic001G220000 Sobic002G159100--Sobic001G220000 Sobic006G063900 Sobic006G063900 Sobic002G159100--Sobic006G063900 Sobic006G108200 Sobic006G108200 Sobic002G159100--Sobic006G108200 Sobic001G350000 Sobic001G350000 Sobic002G159100--Sobic001G350000 Sobic001G436400 Sobic001G436400 Sobic002G159100--Sobic001G436400 Sobic006G197300 Sobic006G197300 Sobic002G159100--Sobic006G197300 Sobic001G005200 Sobic001G005200 Sobic002G159100--Sobic001G005200 Sobic001G104700 Sobic001G104700 Sobic001G104600--Sobic001G104700 Sobic001G015200 Sobic001G015200 Sobic001G104600--Sobic001G015200 Sobic007G046950 Sobic007G046950 Sobic001G104600--Sobic007G046950 Sobic001G411100 Sobic001G411100 Sobic001G104600--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G104600--Sobic002G030900 Sobic003G103300 Sobic003G103300 Sobic001G104600--Sobic003G103300 Sobic005G172400 Sobic005G172400 Sobic001G104600--Sobic005G172400 Sobic002G370600 Sobic002G370600 Sobic001G104600--Sobic002G370600 Sobic010G101000 Sobic010G101000 Sobic001G104600--Sobic010G101000 Sobic006G226601--Sobic001G276300 Sobic006G226601--Sobic003G328100 Sobic006G226601--Sobic007G169100 Sobic006G226601--Sobic004G006400 Sobic010G231500 Sobic010G231500 Sobic006G226601--Sobic010G231500 Sobic006G097500 Sobic006G097500 Sobic006G226601--Sobic006G097500 Sobic002G005600 Sobic002G005600 Sobic006G226601--Sobic002G005600 Sobic007G058001 Sobic007G058001 Sobic006G226601--Sobic007G058001 Sobic009G207900 Sobic009G207900 Sobic006G226601--Sobic009G207900 Sobic007G135800 Sobic007G135800 Sobic001G276300--Sobic007G135800 Sobic001G509200 Sobic001G509200 Sobic001G276300--Sobic001G509200 Sobic005G028800 Sobic005G028800 Sobic001G276300--Sobic005G028800 Sobic006G213700 Sobic006G213700 Sobic001G276300--Sobic006G213700 Sobic003G380200 Sobic003G380200 Sobic001G276300--Sobic003G380200 Sobic001G276300--Sobic006G226601 Sobic001G276300--Sobic010G231500 Sobic001G276300--Sobic007G169100 Sobic002G225100 Sobic002G225100 Sobic001G276300--Sobic002G225100 Sobic010G245200--Sobic007G053800 Sobic010G245200--Sobic002G370600 Sobic010G245200--Sobic001G005200 Sobic003G431700 Sobic003G431700 Sobic010G245200--Sobic003G431700 Sobic009G140600 Sobic009G140600 Sobic010G245200--Sobic009G140600 Sobic001G122300 Sobic001G122300 Sobic010G245200--Sobic001G122300 Sobic006G188000 Sobic006G188000 Sobic010G245200--Sobic006G188000 Sobic003G378600 Sobic003G378600 Sobic010G245200--Sobic003G378600 Sobic008G102000 Sobic008G102000 Sobic010G245200--Sobic008G102000 Sobic004G051100--Sobic006G188000 Sobic002G211000 Sobic002G211000 Sobic004G051100--Sobic002G211000 Sobic007G034300 Sobic007G034300 Sobic004G051100--Sobic007G034300 Sobic004G051100--Sobic010G245200 Sobic004G051100--Sobic005G202500 Sobic004G051100--Sobic001G517700 Sobic004G051100--Sobic002G370600 Sobic004G283100 Sobic004G283100 Sobic004G051100--Sobic004G283100 Sobic004G051100--Sobic007G053800
Octagon: transcription factors


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