Gene annotation
Transcriptome id Sobic.001G449200.1
Synonym Sb01g042220
Functional annotation thaumatin family domain containing protein, expressed
UniProt C5WRT3
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G75050 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os03g13070.1 : thaumatin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a051051 , Zm00025a043524 , Zm00025a001537 , Zm00025a052902 , Zm00025a006952 , Zm00025a049347 , Zm00025a052993
Brachypodium KQJ87038 , KQK22773 , KQK22772 , KQK22607 , KQJ91229
Barley HORVU4Hr1G066130.3 , HORVU4Hr1G066130.4 , HORVU5Hr1G074940.3 , HORVU5Hr1G074940.2 , HORVU5Hr1G112160.4 , HORVU5Hr1G112160.5 , HORVU5Hr1G112160.6 , HORVU5Hr1G112160.7 , HORVU5Hr1G112160.1 , HORVU5Hr1G112160.2 , HORVU5Hr1G112160.3 , HORVU4Hr1G063730.3 , HORVU4Hr1G063730.2 , HORVU4Hr1G063730.1 , HORVU4Hr1G063730.7 , HORVU4Hr1G063730.6 , HORVU4Hr1G063730.5 , HORVU4Hr1G063730.4 , HORVU4Hr1G027300.2 , HORVU5Hr1G083240.4 , HORVU5Hr1G083240.1 , HORVU5Hr1G083240.2 , HORVU5Hr1G083240.3 , HORVU4Hr1G027300.4 , HORVU4Hr1G027300.5 , HORVU4Hr1G027300.3 , HORVU4Hr1G027300.1
Wheat TraesCS4A02G070800 , TraesCS4A02G070800 , TraesCS7D02G517200 , TraesCS4D02G238200 , TraesCS7A02G529500 , TraesCS5D02G283400 , TraesCS5D02G485500 , TraesCS4A02G177300 , TraesCS4D02G227500 , TraesCS4B02G140500 , TraesCS4B02G226800 , TraesCS4B02G236700 , TraesCS5A02G472800 , TraesCS4A02G061200 , TraesCS4D02G135200 , TraesCS7B02G446200 , TraesCS7B02G446200 , TraesCS5B02G485700 , TraesCS5A02G328500 , TraesCS5D02G283400 , TraesCS5D02G334400 , TraesCS7D02G517300 , TraesCS5B02G275400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G097000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
2 Sobic.001G075300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.002G348500 expressed protein -
4 Sobic.005G196700 transporter family protein, putative, expressed -
5 Sobic.006G190600 heavy metal-associated domain containing protein, expressed -
6 Sobic.001G420600 - -
7 Sobic.001G428600 nodulation-signaling pathway 2 protein, putative, expressed -
8 Sobic.007G108700 expressed protein -
9 Sobic.001G481000 expressed protein -
10 Sobic.006G224000 proton-dependent oligopeptide transport, putative, expressed -
11 Sobic.003G355300 membrane associated DUF588 domain containing protein, putative, expressed -
12 Sobic.001G112100 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
13 Sobic.001G304300 LTPL138 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
15 Sobic.004G315000 expressed protein -
16 Sobic.003G117500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
17 Sobic.003G367000 U-box domain-containing protein, putative, expressed -
18 Sobic.004G156000 dehydrogenase/reductase, putative, expressed -
19 Sobic.004G280000 Hydroxyjasmonate sulfotransferase (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
20 Sobic.002G387900 expressed protein -


Gene co-expression network
sample Sobic001G449200 Sobic001G449200 Sobic006G097000 Sobic006G097000 Sobic001G449200--Sobic006G097000 Sobic001G075300 Sobic001G075300 Sobic001G449200--Sobic001G075300 Sobic002G348500 Sobic002G348500 Sobic001G449200--Sobic002G348500 Sobic005G196700 Sobic005G196700 Sobic001G449200--Sobic005G196700 Sobic006G190600 Sobic006G190600 Sobic001G449200--Sobic006G190600 Sobic001G420600 Sobic001G420600 Sobic001G449200--Sobic001G420600 Sobic001G428600 Sobic001G428600 Sobic001G449200--Sobic001G428600 Sobic007G108700 Sobic007G108700 Sobic001G449200--Sobic007G108700 Sobic001G481000 Sobic001G481000 Sobic001G449200--Sobic001G481000 Sobic006G097000--Sobic002G348500 Sobic006G096600 Sobic006G096600 Sobic006G097000--Sobic006G096600 Sobic001G108800 Sobic001G108800 Sobic006G097000--Sobic001G108800 Sobic006G097000--Sobic001G428600 Sobic004G310200 Sobic004G310200 Sobic006G097000--Sobic004G310200 Sobic003G084400 Sobic003G084400 Sobic006G097000--Sobic003G084400 Sobic006G199800 Sobic006G199800 Sobic006G097000--Sobic006G199800 Sobic001G128500 Sobic001G128500 Sobic006G097000--Sobic001G128500 Sobic001G304100 Sobic001G304100 Sobic006G097000--Sobic001G304100 Sobic010G170150 Sobic010G170150 Sobic001G075300--Sobic010G170150 Sobic009G150600 Sobic009G150600 Sobic001G075300--Sobic009G150600 Sobic008G076700 Sobic008G076700 Sobic001G075300--Sobic008G076700 Sobic001G075300--Sobic001G428600 Sobic001G075300--Sobic007G108700 Sobic010G082100 Sobic010G082100 Sobic001G075300--Sobic010G082100 Sobic010G083300 Sobic010G083300 Sobic001G075300--Sobic010G083300 Sobic002G185400 Sobic002G185400 Sobic001G075300--Sobic002G185400 Sobic004G212600 Sobic004G212600 Sobic001G075300--Sobic004G212600 Sobic002G348500--Sobic006G097000 Sobic009G065500 Sobic009G065500 Sobic002G348500--Sobic009G065500 Sobic001G100600 Sobic001G100600 Sobic002G348500--Sobic001G100600 Sobic002G354100 Sobic002G354100 Sobic002G348500--Sobic002G354100 Sobic004G229800 Sobic004G229800 Sobic002G348500--Sobic004G229800 Sobic003G322900 Sobic003G322900 Sobic002G348500--Sobic003G322900 Sobic006G132900 Sobic006G132900 Sobic002G348500--Sobic006G132900 Sobic001G435000 Sobic001G435000 Sobic002G348500--Sobic001G435000 Sobic010G259500 Sobic010G259500 Sobic002G348500--Sobic010G259500 Sobic005G196700--Sobic002G185400 Sobic005G196700--Sobic010G083300 Sobic005G196700--Sobic001G420600 Sobic005G196700--Sobic001G075300 Sobic001G084200 Sobic001G084200 Sobic005G196700--Sobic001G084200 Sobic005G196700--Sobic001G449200 Sobic009G168700 Sobic009G168700 Sobic005G196700--Sobic009G168700 Sobic007G053000 Sobic007G053000 Sobic005G196700--Sobic007G053000 Sobic004G352800 Sobic004G352800 Sobic005G196700--Sobic004G352800 Sobic006G190600--Sobic001G481000 Sobic003G117500 Sobic003G117500 Sobic006G190600--Sobic003G117500 Sobic001G304300 Sobic001G304300 Sobic006G190600--Sobic001G304300 Sobic005G142500 Sobic005G142500 Sobic006G190600--Sobic005G142500 Sobic001G295800 Sobic001G295800 Sobic006G190600--Sobic001G295800 Sobic002G350500 Sobic002G350500 Sobic006G190600--Sobic002G350500 Sobic003G321200 Sobic003G321200 Sobic006G190600--Sobic003G321200 Sobic005G004700 Sobic005G004700 Sobic006G190600--Sobic005G004700 Sobic002G247800 Sobic002G247800 Sobic006G190600--Sobic002G247800 Sobic010G102100 Sobic010G102100 Sobic001G420600--Sobic010G102100 Sobic001G037600 Sobic001G037600 Sobic001G420600--Sobic001G037600 Sobic001G420600--Sobic002G348500 Sobic002G230201 Sobic002G230201 Sobic001G420600--Sobic002G230201 Sobic004G156000 Sobic004G156000 Sobic001G420600--Sobic004G156000 Sobic004G105001 Sobic004G105001 Sobic001G420600--Sobic004G105001 Sobic004G280000 Sobic004G280000 Sobic001G420600--Sobic004G280000 Sobic005G033900 Sobic005G033900 Sobic001G420600--Sobic005G033900 Sobic004G241100 Sobic004G241100 Sobic001G420600--Sobic004G241100 Sobic006G202600 Sobic006G202600 Sobic001G428600--Sobic006G202600 Sobic001G508532 Sobic001G508532 Sobic001G428600--Sobic001G508532 Sobic001G237900 Sobic001G237900 Sobic001G428600--Sobic001G237900 Sobic010G196000 Sobic010G196000 Sobic001G428600--Sobic010G196000 Sobic008G127933 Sobic008G127933 Sobic001G428600--Sobic008G127933 Sobic005G213600 Sobic005G213600 Sobic001G428600--Sobic005G213600 Sobic003G053300 Sobic003G053300 Sobic001G428600--Sobic003G053300 Sobic006G158400 Sobic006G158400 Sobic001G428600--Sobic006G158400 Sobic010G158500 Sobic010G158500 Sobic001G428600--Sobic010G158500 Sobic004G011100 Sobic004G011100 Sobic007G108700--Sobic004G011100 Sobic003G139300 Sobic003G139300 Sobic007G108700--Sobic003G139300 Sobic003G368600 Sobic003G368600 Sobic007G108700--Sobic003G368600 Sobic001G021900 Sobic001G021900 Sobic007G108700--Sobic001G021900 Sobic002G356500 Sobic002G356500 Sobic007G108700--Sobic002G356500 Sobic007G108700--Sobic001G075300 Sobic002G235500 Sobic002G235500 Sobic007G108700--Sobic002G235500 Sobic010G204200 Sobic010G204200 Sobic007G108700--Sobic010G204200 Sobic003G024900 Sobic003G024900 Sobic007G108700--Sobic003G024900 Sobic001G481000--Sobic001G304100 Sobic001G310300 Sobic001G310300 Sobic001G481000--Sobic001G310300 Sobic010G184800 Sobic010G184800 Sobic001G481000--Sobic010G184800 Sobic004G203700 Sobic004G203700 Sobic001G481000--Sobic004G203700 Sobic009G188000 Sobic009G188000 Sobic001G481000--Sobic009G188000 Sobic003G027400 Sobic003G027400 Sobic001G481000--Sobic003G027400 Sobic001G481000--Sobic003G321200 Sobic002G213600 Sobic002G213600 Sobic001G481000--Sobic002G213600 Sobic003G160700 Sobic003G160700 Sobic001G481000--Sobic003G160700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.