Gene annotation
Transcriptome id Sobic.001G449400.1
Synonym ATARI2, Sb01g042240, ARI2
Functional annotation ariadne-1, putative, expressed
UniProt C5WRT5
Pfam PF01485
Panther DB PTHR11685 PTHR11685:SF119
NCBI CDD KOG1815; Predicted E3 ubiquitin ligase
KEGG Orthology K11968; ariadne-1
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT2G16090 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os03g13100.1 : ariadne-1, putative, expressed
MaizeGDB (Corn) Zm00025a001396 , Zm00025a052998
Brachypodium KQK22775
Barley HORVU7Hr1G068450.1 , HORVU7Hr1G068450.2 , HORVU7Hr1G068450.3 , HORVU1Hr1G018020.1 , HORVU1Hr1G018020.2 , HORVU1Hr1G018020.3 , HORVU4Hr1G066180.3 , HORVU4Hr1G066180.2 , HORVU4Hr1G066180.1 , HORVU4Hr1G066180.5 , HORVU4Hr1G066180.4
Wheat TraesCS4D02G238400 , TraesCS4A02G061500 , TraesCS4D02G238400 , TraesCS4B02G236900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G093800 - K03254: translation initiation factor 3 subunit A
2 Sobic.009G092400 zinc finger, C3HC4 type family protein, expressed -
3 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
4 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
5 Sobic.001G263600 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
6 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
7 Sobic.001G227400 WD domain, G-beta repeat domain containing protein, expressed -
8 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
9 Sobic.004G351600 expressed protein K18734: protein SMG8
10 Sobic.006G096900 expressed protein -
11 Sobic.001G536400 THO complex subunit 1, putative, expressed K12878: THO complex subunit 1
12 Sobic.009G249700 expressed protein -
13 Sobic.008G118200 vesicle tethering family protein, putative, expressed -
14 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
15 Sobic.003G352200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
17 Sobic.007G172200 inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed K18081: myotubularin-related protein 1/2
18 Sobic.007G133700 expressed protein -
19 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
20 Sobic.010G116600 FHA domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G449400 Sobic001G449400 Sobic003G093800 Sobic003G093800 Sobic001G449400--Sobic003G093800 Sobic009G092400 Sobic009G092400 Sobic001G449400--Sobic009G092400 Sobic009G044800 Sobic009G044800 Sobic001G449400--Sobic009G044800 Sobic007G218000 Sobic007G218000 Sobic001G449400--Sobic007G218000 Sobic001G263600 Sobic001G263600 Sobic001G449400--Sobic001G263600 Sobic001G451400 Sobic001G451400 Sobic001G449400--Sobic001G451400 Sobic001G227400 Sobic001G227400 Sobic001G449400--Sobic001G227400 Sobic001G354600 Sobic001G354600 Sobic001G449400--Sobic001G354600 Sobic004G351600 Sobic004G351600 Sobic001G449400--Sobic004G351600 Sobic010G116600 Sobic010G116600 Sobic003G093800--Sobic010G116600 Sobic001G065000 Sobic001G065000 Sobic003G093800--Sobic001G065000 Sobic003G408600 Sobic003G408600 Sobic003G093800--Sobic003G408600 Sobic001G536400 Sobic001G536400 Sobic003G093800--Sobic001G536400 Sobic001G058700 Sobic001G058700 Sobic003G093800--Sobic001G058700 Sobic002G299700 Sobic002G299700 Sobic003G093800--Sobic002G299700 Sobic003G093800--Sobic009G044800 Sobic002G071500 Sobic002G071500 Sobic003G093800--Sobic002G071500 Sobic009G249700 Sobic009G249700 Sobic003G093800--Sobic009G249700 Sobic009G092400--Sobic007G218000 Sobic005G160400 Sobic005G160400 Sobic009G092400--Sobic005G160400 Sobic009G092400--Sobic009G044800 Sobic009G092400--Sobic009G249700 Sobic007G125000 Sobic007G125000 Sobic009G092400--Sobic007G125000 Sobic004G209700 Sobic004G209700 Sobic009G092400--Sobic004G209700 Sobic002G303600 Sobic002G303600 Sobic009G092400--Sobic002G303600 Sobic006G180000 Sobic006G180000 Sobic009G092400--Sobic006G180000 Sobic007G132100 Sobic007G132100 Sobic009G092400--Sobic007G132100 Sobic003G360400 Sobic003G360400 Sobic009G044800--Sobic003G360400 Sobic003G352200 Sobic003G352200 Sobic009G044800--Sobic003G352200 Sobic009G044800--Sobic001G227400 Sobic002G045600 Sobic002G045600 Sobic009G044800--Sobic002G045600 Sobic009G044800--Sobic010G116600 Sobic009G044800--Sobic007G218000 Sobic001G025000 Sobic001G025000 Sobic009G044800--Sobic001G025000 Sobic001G433800 Sobic001G433800 Sobic009G044800--Sobic001G433800 Sobic007G183900 Sobic007G183900 Sobic009G044800--Sobic007G183900 Sobic007G218000--Sobic007G132100 Sobic004G072100 Sobic004G072100 Sobic007G218000--Sobic004G072100 Sobic002G112700 Sobic002G112700 Sobic007G218000--Sobic002G112700 Sobic006G131000 Sobic006G131000 Sobic007G218000--Sobic006G131000 Sobic007G218000--Sobic009G044800 Sobic010G204400 Sobic010G204400 Sobic007G218000--Sobic010G204400 Sobic006G012500 Sobic006G012500 Sobic007G218000--Sobic006G012500 Sobic007G218000--Sobic009G249700 Sobic007G218000--Sobic009G092400 Sobic008G088872 Sobic008G088872 Sobic001G263600--Sobic008G088872 Sobic002G429300 Sobic002G429300 Sobic001G263600--Sobic002G429300 Sobic002G142900 Sobic002G142900 Sobic001G263600--Sobic002G142900 Sobic005G062200 Sobic005G062200 Sobic001G263600--Sobic005G062200 Sobic008G098900 Sobic008G098900 Sobic001G263600--Sobic008G098900 Sobic002G042600 Sobic002G042600 Sobic001G263600--Sobic002G042600 Sobic001G273700 Sobic001G273700 Sobic001G263600--Sobic001G273700 Sobic003G072200 Sobic003G072200 Sobic001G263600--Sobic003G072200 Sobic009G131300 Sobic009G131300 Sobic001G263600--Sobic009G131300 Sobic007G008900 Sobic007G008900 Sobic001G451400--Sobic007G008900 Sobic009G165700 Sobic009G165700 Sobic001G451400--Sobic009G165700 Sobic001G441400 Sobic001G441400 Sobic001G451400--Sobic001G441400 Sobic001G389100 Sobic001G389100 Sobic001G451400--Sobic001G389100 Sobic010G247800 Sobic010G247800 Sobic001G451400--Sobic010G247800 Sobic003G404500 Sobic003G404500 Sobic001G451400--Sobic003G404500 Sobic010G226000 Sobic010G226000 Sobic001G451400--Sobic010G226000 Sobic005G027400 Sobic005G027400 Sobic001G451400--Sobic005G027400 Sobic003G422500 Sobic003G422500 Sobic001G451400--Sobic003G422500 Sobic001G227400--Sobic009G044800 Sobic001G227400--Sobic007G218000 Sobic001G493200 Sobic001G493200 Sobic001G227400--Sobic001G493200 Sobic001G493700 Sobic001G493700 Sobic001G227400--Sobic001G493700 Sobic006G088200 Sobic006G088200 Sobic001G227400--Sobic006G088200 Sobic009G084900 Sobic009G084900 Sobic001G227400--Sobic009G084900 Sobic003G195000 Sobic003G195000 Sobic001G227400--Sobic003G195000 Sobic005G172500 Sobic005G172500 Sobic001G227400--Sobic005G172500 Sobic001G289800 Sobic001G289800 Sobic001G227400--Sobic001G289800 Sobic001G354600--Sobic003G360400 Sobic010G112100 Sobic010G112100 Sobic001G354600--Sobic010G112100 Sobic001G354600--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic001G354600--Sobic004G048800 Sobic007G105100 Sobic007G105100 Sobic001G354600--Sobic007G105100 Sobic002G133300 Sobic002G133300 Sobic001G354600--Sobic002G133300 Sobic001G063700 Sobic001G063700 Sobic001G354600--Sobic001G063700 Sobic002G068100 Sobic002G068100 Sobic001G354600--Sobic002G068100 Sobic001G354600--Sobic009G044800 Sobic009G256400 Sobic009G256400 Sobic004G351600--Sobic009G256400 Sobic007G063000 Sobic007G063000 Sobic004G351600--Sobic007G063000 Sobic003G166750 Sobic003G166750 Sobic004G351600--Sobic003G166750 Sobic004G351600--Sobic002G042600 Sobic003G095900 Sobic003G095900 Sobic004G351600--Sobic003G095900 Sobic004G276400 Sobic004G276400 Sobic004G351600--Sobic004G276400 Sobic004G351600--Sobic002G133300 Sobic004G351600--Sobic009G165700 Sobic001G370900 Sobic001G370900 Sobic004G351600--Sobic001G370900
Octagon: transcription factors


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