Gene annotation
Transcriptome id Sobic.001G500200.1
Synonym Sb01g046730
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WXU4
Pfam PF01494
Panther DB PTHR13789 PTHR13789:SF185
NCBI CDD KOG2614; Kynurenine 3-monooxygenase and related flavoprotein monooxygenases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05320 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os03g05900.1 : expressed protein
MaizeGDB (Corn) Zm00025a053439
Brachypodium PNT78171 , PNT78170 , KQK23590 , KQK23587 , KQK23586 , KQK23589 , KQK23588
Barley HORVU3Hr1G099270.1 , HORVU3Hr1G099270.2 , HORVU3Hr1G099270.3 , HORVU4Hr1G072320.8 , HORVU4Hr1G072320.9 , HORVU4Hr1G072320.2 , HORVU4Hr1G072320.3 , HORVU4Hr1G072320.1 , HORVU4Hr1G072320.6 , HORVU4Hr1G072320.7 , HORVU4Hr1G072320.4 , HORVU4Hr1G072320.5 , HORVU4Hr1G072310.3 , HORVU4Hr1G072310.2 , HORVU4Hr1G072310.1 , HORVU4Hr1G072310.6 , HORVU4Hr1G072310.5 , HORVU4Hr1G072310.4 , HORVU3Hr1G093840.2 , HORVU4Hr1G072320.10 , HORVU3Hr1G093840.4 , HORVU3Hr1G093840.1
Wheat TraesCS4B02G270800 , TraesCS4D02G269300 , TraesCS4D02G269700 , TraesCS4B02G270100 , TraesCS4A02G037000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G042300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G215800 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
3 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
4 Sobic.001G412700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.006G126400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
6 Sobic.003G228100 cytochrome P450 72A1, putative, expressed -
7 Sobic.009G193700 transmembrane protein 56, putative, expressed -
8 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
9 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G251900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exonuclease, putative, expressed -
11 Sobic.007G003200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
12 Sobic.001G101400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@PIII4 - Proteinase inhibitor II family protein precursor, expressed -
13 Sobic.006G052100 nodulin, putative, expressed -
14 Sobic.004G265800 uridine kinase, putative, expressed -
15 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -
16 Sobic.001G212000 GEM, putative, expressed -
17 Sobic.010G169000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Multi-drugresistance-associated protein 6(PubMedID : 26320239)@ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.006G261550 - -
19 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
20 Sobic.003G200100 DUF630/DUF632 domains containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G500200 Sobic001G500200 Sobic004G042300 Sobic004G042300 Sobic001G500200--Sobic004G042300 Sobic002G215800 Sobic002G215800 Sobic001G500200--Sobic002G215800 Sobic009G029600 Sobic009G029600 Sobic001G500200--Sobic009G029600 Sobic001G412700 Sobic001G412700 Sobic001G500200--Sobic001G412700 Sobic006G126400 Sobic006G126400 Sobic001G500200--Sobic006G126400 Sobic003G228100 Sobic003G228100 Sobic001G500200--Sobic003G228100 Sobic009G193700 Sobic009G193700 Sobic001G500200--Sobic009G193700 Sobic004G102400 Sobic004G102400 Sobic001G500200--Sobic004G102400 Sobic003G320700 Sobic003G320700 Sobic001G500200--Sobic003G320700 Sobic006G052100 Sobic006G052100 Sobic004G042300--Sobic006G052100 Sobic004G042300--Sobic009G193700 Sobic008G062200 Sobic008G062200 Sobic004G042300--Sobic008G062200 Sobic004G042300--Sobic004G102400 Sobic004G042300--Sobic003G320700 Sobic003G329400 Sobic003G329400 Sobic004G042300--Sobic003G329400 Sobic002G132000 Sobic002G132000 Sobic004G042300--Sobic002G132000 Sobic001G089800 Sobic001G089800 Sobic004G042300--Sobic001G089800 Sobic001G290000 Sobic001G290000 Sobic004G042300--Sobic001G290000 Sobic002G215800--Sobic009G029600 Sobic009G211400 Sobic009G211400 Sobic002G215800--Sobic009G211400 Sobic003G219600 Sobic003G219600 Sobic002G215800--Sobic003G219600 Sobic004G255000 Sobic004G255000 Sobic002G215800--Sobic004G255000 Sobic001G249300 Sobic001G249300 Sobic002G215800--Sobic001G249300 Sobic001G280200 Sobic001G280200 Sobic002G215800--Sobic001G280200 Sobic003G138200 Sobic003G138200 Sobic002G215800--Sobic003G138200 Sobic004G260000 Sobic004G260000 Sobic002G215800--Sobic004G260000 Sobic010G107000 Sobic010G107000 Sobic002G215800--Sobic010G107000 Sobic009G029600--Sobic004G255000 Sobic009G029600--Sobic001G280200 Sobic009G029600--Sobic003G219600 Sobic009G029600--Sobic001G249300 Sobic009G029600--Sobic009G211400 Sobic006G030700 Sobic006G030700 Sobic009G029600--Sobic006G030700 Sobic009G054500 Sobic009G054500 Sobic009G029600--Sobic009G054500 Sobic009G029600--Sobic002G215800 Sobic009G226300 Sobic009G226300 Sobic009G029600--Sobic009G226300 Sobic001G412700--Sobic004G255000 Sobic003G259200 Sobic003G259200 Sobic001G412700--Sobic003G259200 Sobic005G152100 Sobic005G152100 Sobic001G412700--Sobic005G152100 Sobic003G269700 Sobic003G269700 Sobic001G412700--Sobic003G269700 Sobic004G246200 Sobic004G246200 Sobic001G412700--Sobic004G246200 Sobic001G212000 Sobic001G212000 Sobic001G412700--Sobic001G212000 Sobic001G412700--Sobic009G029600 Sobic002G322900 Sobic002G322900 Sobic001G412700--Sobic002G322900 Sobic005G018500 Sobic005G018500 Sobic001G412700--Sobic005G018500 Sobic003G441100 Sobic003G441100 Sobic006G126400--Sobic003G441100 Sobic010G016800 Sobic010G016800 Sobic006G126400--Sobic010G016800 Sobic001G251900 Sobic001G251900 Sobic006G126400--Sobic001G251900 Sobic004G006966 Sobic004G006966 Sobic006G126400--Sobic004G006966 Sobic001G101400 Sobic001G101400 Sobic006G126400--Sobic001G101400 Sobic001G185500 Sobic001G185500 Sobic003G228100--Sobic001G185500 Sobic003G228100--Sobic001G089800 Sobic001G003000 Sobic001G003000 Sobic003G228100--Sobic001G003000 Sobic001G350700 Sobic001G350700 Sobic003G228100--Sobic001G350700 Sobic003G228100--Sobic004G042300 Sobic008G093000 Sobic008G093000 Sobic003G228100--Sobic008G093000 Sobic003G098000 Sobic003G098000 Sobic003G228100--Sobic003G098000 Sobic004G005200 Sobic004G005200 Sobic003G228100--Sobic004G005200 Sobic003G352600 Sobic003G352600 Sobic003G228100--Sobic003G352600 Sobic009G193700--Sobic010G107000 Sobic009G193700--Sobic008G062200 Sobic009G193700--Sobic009G211400 Sobic003G355600 Sobic003G355600 Sobic009G193700--Sobic003G355600 Sobic009G193700--Sobic009G029600 Sobic009G193700--Sobic004G260000 Sobic009G193700--Sobic003G219600 Sobic006G199000 Sobic006G199000 Sobic009G193700--Sobic006G199000 Sobic009G193700--Sobic001G089800 Sobic003G338400 Sobic003G338400 Sobic004G102400--Sobic003G338400 Sobic001G158500 Sobic001G158500 Sobic004G102400--Sobic001G158500 Sobic004G102400--Sobic001G003000 Sobic009G167700 Sobic009G167700 Sobic004G102400--Sobic009G167700 Sobic005G150800 Sobic005G150800 Sobic004G102400--Sobic005G150800 Sobic006G271200 Sobic006G271200 Sobic004G102400--Sobic006G271200 Sobic004G102400--Sobic001G089800 Sobic001G057800 Sobic001G057800 Sobic004G102400--Sobic001G057800 Sobic004G102400--Sobic004G042300 Sobic003G301900 Sobic003G301900 Sobic003G320700--Sobic003G301900 Sobic006G104600 Sobic006G104600 Sobic003G320700--Sobic006G104600 Sobic001G517800 Sobic001G517800 Sobic003G320700--Sobic001G517800 Sobic001G436900 Sobic001G436900 Sobic003G320700--Sobic001G436900 Sobic007G075400 Sobic007G075400 Sobic003G320700--Sobic007G075400 Sobic006G204900 Sobic006G204900 Sobic003G320700--Sobic006G204900 Sobic006G087700 Sobic006G087700 Sobic003G320700--Sobic006G087700 Sobic003G322700 Sobic003G322700 Sobic003G320700--Sobic003G322700 Sobic003G320700--Sobic009G193700
Octagon: transcription factors


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