Gene annotation
Transcriptome id Sobic.002G031500.1,Sobic.002G031500.2,Sobic.002G031500.3
Synonym Sb02g002776
Functional annotation OsFBLD3 - F-box, LRR and FBD domain containing protein, expressed
UniProt A0A1W0W251 , C5X9G7
Pfam -
Panther DB PTHR32212 PTHR32212:SF74
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58880 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os07g06900.1,LOC_Os11g33310.1 : OsFBX424 - F-box domain containing protein, expressed,OsFBLD3 - F-box, LRR and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G031500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G503200 ZOS3-01 - C2H2 zinc finger protein, expressed -
2 Sobic.002G162500 - -
3 Sobic.002G167800 expressed protein -
4 Sobic.001G440100 cell cycle checkpoint protein RAD17, putative, expressed K06662: HRAD17, cell cycle checkpoint protein
5 Sobic.003G256600 - -
6 Sobic.004G135900 - -
7 Sobic.003G411800 receptor-like protein kinase 2 precursor, putative, expressed -
8 Sobic.001G258900 - -
9 Sobic.003G311600 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
10 Sobic.005G008600 double-stranded RNA binding motif containing protein, expressed -
11 Sobic.005G077800 OsFBX411 - F-box domain containing protein, expressed -
12 Sobic.003G104100 expressed protein -
13 Sobic.002G252100 methyl-binding domain protein MBD, putative, expressed -
14 Sobic.004G199200 expressed protein K10858: DNA mismatch repair protein PMS2
15 Sobic.003G299500 expressed protein -
16 Sobic.002G239601 - -
17 Sobic.008G123300 AAA-type ATPase family protein, putative, expressed -
18 Sobic.002G054400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
19 Sobic.001G027500 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
20 Sobic.006G245900 FAR1 family protein, expressed -


Gene co-expression network
sample Sobic002G031500 Sobic002G031500 Sobic001G503200 Sobic001G503200 Sobic002G031500--Sobic001G503200 Sobic002G162500 Sobic002G162500 Sobic002G031500--Sobic002G162500 Sobic002G167800 Sobic002G167800 Sobic002G031500--Sobic002G167800 Sobic001G440100 Sobic001G440100 Sobic002G031500--Sobic001G440100 Sobic003G256600 Sobic003G256600 Sobic002G031500--Sobic003G256600 Sobic004G135900 Sobic004G135900 Sobic002G031500--Sobic004G135900 Sobic003G411800 Sobic003G411800 Sobic002G031500--Sobic003G411800 Sobic001G258900 Sobic001G258900 Sobic002G031500--Sobic001G258900 Sobic003G311600 Sobic003G311600 Sobic002G031500--Sobic003G311600 Sobic001G503200--Sobic002G031500 Sobic003G188600 Sobic003G188600 Sobic001G503200--Sobic003G188600 Sobic003G272700 Sobic003G272700 Sobic001G503200--Sobic003G272700 Sobic003G360300 Sobic003G360300 Sobic001G503200--Sobic003G360300 Sobic003G032600 Sobic003G032600 Sobic001G503200--Sobic003G032600 Sobic001G191900 Sobic001G191900 Sobic001G503200--Sobic001G191900 Sobic002G076100 Sobic002G076100 Sobic001G503200--Sobic002G076100 Sobic004G356200 Sobic004G356200 Sobic001G503200--Sobic004G356200 Sobic003G050700 Sobic003G050700 Sobic001G503200--Sobic003G050700 Sobic002G162500--Sobic001G258900 Sobic001G300900 Sobic001G300900 Sobic002G162500--Sobic001G300900 Sobic003G341700 Sobic003G341700 Sobic002G162500--Sobic003G341700 Sobic008G088842 Sobic008G088842 Sobic002G162500--Sobic008G088842 Sobic002G340200 Sobic002G340200 Sobic002G162500--Sobic002G340200 Sobic002G162500--Sobic004G135900 Sobic010G172000 Sobic010G172000 Sobic002G162500--Sobic010G172000 Sobic009G107080 Sobic009G107080 Sobic002G162500--Sobic009G107080 Sobic006G063001 Sobic006G063001 Sobic002G162500--Sobic006G063001 Sobic010G260000 Sobic010G260000 Sobic002G167800--Sobic010G260000 Sobic002G167800--Sobic003G311600 Sobic006G137600 Sobic006G137600 Sobic002G167800--Sobic006G137600 Sobic002G167800--Sobic002G162500 Sobic006G262400 Sobic006G262400 Sobic002G167800--Sobic006G262400 Sobic009G155800 Sobic009G155800 Sobic002G167800--Sobic009G155800 Sobic002G167800--Sobic008G088842 Sobic002G043100 Sobic002G043100 Sobic002G167800--Sobic002G043100 Sobic001G417500 Sobic001G417500 Sobic002G167800--Sobic001G417500 Sobic003G330900 Sobic003G330900 Sobic001G440100--Sobic003G330900 Sobic010G038100 Sobic010G038100 Sobic001G440100--Sobic010G038100 Sobic002G252100 Sobic002G252100 Sobic001G440100--Sobic002G252100 Sobic006G112700 Sobic006G112700 Sobic001G440100--Sobic006G112700 Sobic001G239800 Sobic001G239800 Sobic001G440100--Sobic001G239800 Sobic010G026600 Sobic010G026600 Sobic001G440100--Sobic010G026600 Sobic006G236000 Sobic006G236000 Sobic001G440100--Sobic006G236000 Sobic003G123100 Sobic003G123100 Sobic001G440100--Sobic003G123100 Sobic004G215900 Sobic004G215900 Sobic001G440100--Sobic004G215900 Sobic003G256600--Sobic004G135900 Sobic003G256600--Sobic006G063001 Sobic003G256600--Sobic002G031500 Sobic003G256600--Sobic002G162500 Sobic003G256600--Sobic009G107080 Sobic003G256600--Sobic001G503200 Sobic003G256600--Sobic003G032600 Sobic010G060166 Sobic010G060166 Sobic003G256600--Sobic010G060166 Sobic003G256600--Sobic001G258900 Sobic004G135900--Sobic006G063001 Sobic004G135900--Sobic003G256600 Sobic004G135900--Sobic002G162500 Sobic003G142000 Sobic003G142000 Sobic004G135900--Sobic003G142000 Sobic009G239301 Sobic009G239301 Sobic004G135900--Sobic009G239301 Sobic004G135900--Sobic010G172000 Sobic006G274100 Sobic006G274100 Sobic004G135900--Sobic006G274100 Sobic004G135900--Sobic009G107080 Sobic001G346900 Sobic001G346900 Sobic004G135900--Sobic001G346900 Sobic004G179800 Sobic004G179800 Sobic003G411800--Sobic004G179800 Sobic010G024500 Sobic010G024500 Sobic003G411800--Sobic010G024500 Sobic002G020600 Sobic002G020600 Sobic003G411800--Sobic002G020600 Sobic005G163400 Sobic005G163400 Sobic003G411800--Sobic005G163400 Sobic003G104100 Sobic003G104100 Sobic003G411800--Sobic003G104100 Sobic008G190000 Sobic008G190000 Sobic003G411800--Sobic008G190000 Sobic003G366000 Sobic003G366000 Sobic003G411800--Sobic003G366000 Sobic008G038200 Sobic008G038200 Sobic003G411800--Sobic008G038200 Sobic006G067700 Sobic006G067700 Sobic003G411800--Sobic006G067700 Sobic001G258900--Sobic002G162500 Sobic001G258900--Sobic010G172000 Sobic001G258900--Sobic003G341700 Sobic001G258900--Sobic009G107080 Sobic001G258900--Sobic006G063001 Sobic008G097600 Sobic008G097600 Sobic001G258900--Sobic008G097600 Sobic001G258900--Sobic001G300900 Sobic008G092532 Sobic008G092532 Sobic001G258900--Sobic008G092532 Sobic001G258900--Sobic003G311600 Sobic007G070000 Sobic007G070000 Sobic003G311600--Sobic007G070000 Sobic003G311600--Sobic008G088842 Sobic003G311600--Sobic003G104100 Sobic001G165801 Sobic001G165801 Sobic003G311600--Sobic001G165801 Sobic003G311600--Sobic006G236000 Sobic003G311600--Sobic002G340200 Sobic007G094500 Sobic007G094500 Sobic003G311600--Sobic007G094500 Sobic003G135500 Sobic003G135500 Sobic003G311600--Sobic003G135500 Sobic003G311600--Sobic002G162500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.