Gene annotation
Transcriptome id Sobic.005G077800.4,Sobic.005G077800.3,Sobic.005G077800.6,Sobic.005G077800.7,Sobic.005G077800.5
Synonym Sb05g006290
Functional annotation OsFBX411 - F-box domain containing protein, expressed
UniProt A0A1Z5RH97 , A0A1Z5RHL9 , C5Y755
Pfam -
Panther DB PTHR32212 PTHR32212:SF100
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G28410 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os11g09970.1 : OsFBX411 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS4B02G103600 , TraesCS4D02G100700 , TraesCS4D02G100700 , TraesCS7B02G104100 , TraesCS7D02G200100 , TraesCS7D02G200100 , TraesCS7A02G198400
Populus -


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cDNA sequences
Sobic.005G077800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G239601 - -
2 Sobic.002G031500 OsFBLD3 - F-box, LRR and FBD domain containing protein, expressed -
3 Sobic.005G163301 - -
4 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -
5 Sobic.010G066400 PPR repeat domain containing protein, putative, expressed -
6 Sobic.010G279300 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed -
7 Sobic.001G417500 expressed protein -
8 Sobic.001G503200 ZOS3-01 - C2H2 zinc finger protein, expressed -
9 Sobic.002G060600 OsFBX237 - F-box domain containing protein, expressed -
10 Sobic.006G225100 OsFBDUF17 - F-box and DUF domain containing protein, expressed -
11 Sobic.006G140400 DNA mismatch repair protein, putative, expressed -
12 Sobic.002G336200 nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
13 Sobic.004G135900 - -
14 Sobic.002G060700 OsFBX237 - F-box domain containing protein, expressed -
15 Sobic.003G120300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
16 Sobic.002G220600 potassium transporter, putative, expressed -
17 Sobic.003G272700 transmembrane protein 16K, putative, expressed -
18 Sobic.003G032600 - -
19 Sobic.010G033600 BRCA1 C Terminus domain containing protein, expressed K10803: DNA-repair protein XRCC1
20 Sobic.007G164200 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@expressed protein -


Gene co-expression network
sample Sobic005G077800 Sobic005G077800 Sobic002G239601 Sobic002G239601 Sobic005G077800--Sobic002G239601 Sobic002G031500 Sobic002G031500 Sobic005G077800--Sobic002G031500 Sobic005G163301 Sobic005G163301 Sobic005G077800--Sobic005G163301 Sobic009G107300 Sobic009G107300 Sobic005G077800--Sobic009G107300 Sobic010G066400 Sobic010G066400 Sobic005G077800--Sobic010G066400 Sobic010G279300 Sobic010G279300 Sobic005G077800--Sobic010G279300 Sobic001G417500 Sobic001G417500 Sobic005G077800--Sobic001G417500 Sobic001G503200 Sobic001G503200 Sobic005G077800--Sobic001G503200 Sobic002G060600 Sobic002G060600 Sobic005G077800--Sobic002G060600 Sobic002G386900 Sobic002G386900 Sobic002G239601--Sobic002G386900 Sobic001G123600 Sobic001G123600 Sobic002G239601--Sobic001G123600 Sobic002G386600 Sobic002G386600 Sobic002G239601--Sobic002G386600 Sobic004G356200 Sobic004G356200 Sobic002G239601--Sobic004G356200 Sobic007G034200 Sobic007G034200 Sobic002G239601--Sobic007G034200 Sobic008G123300 Sobic008G123300 Sobic002G239601--Sobic008G123300 Sobic003G360300 Sobic003G360300 Sobic002G239601--Sobic003G360300 Sobic003G299500 Sobic003G299500 Sobic002G239601--Sobic003G299500 Sobic001G200200 Sobic001G200200 Sobic002G239601--Sobic001G200200 Sobic002G031500--Sobic001G503200 Sobic002G162500 Sobic002G162500 Sobic002G031500--Sobic002G162500 Sobic002G167800 Sobic002G167800 Sobic002G031500--Sobic002G167800 Sobic001G440100 Sobic001G440100 Sobic002G031500--Sobic001G440100 Sobic003G256600 Sobic003G256600 Sobic002G031500--Sobic003G256600 Sobic004G135900 Sobic004G135900 Sobic002G031500--Sobic004G135900 Sobic003G411800 Sobic003G411800 Sobic002G031500--Sobic003G411800 Sobic001G258900 Sobic001G258900 Sobic002G031500--Sobic001G258900 Sobic003G311600 Sobic003G311600 Sobic002G031500--Sobic003G311600 Sobic002G042800 Sobic002G042800 Sobic005G163301--Sobic002G042800 Sobic001G376200 Sobic001G376200 Sobic005G163301--Sobic001G376200 Sobic003G120300 Sobic003G120300 Sobic005G163301--Sobic003G120300 Sobic004G208900 Sobic004G208900 Sobic005G163301--Sobic004G208900 Sobic002G278000 Sobic002G278000 Sobic005G163301--Sobic002G278000 Sobic002G103600 Sobic002G103600 Sobic005G163301--Sobic002G103600 Sobic006G116100 Sobic006G116100 Sobic005G163301--Sobic006G116100 Sobic008G028700 Sobic008G028700 Sobic005G163301--Sobic008G028700 Sobic007G147400 Sobic007G147400 Sobic005G163301--Sobic007G147400 Sobic009G228000 Sobic009G228000 Sobic009G107300--Sobic009G228000 Sobic007G087000 Sobic007G087000 Sobic009G107300--Sobic007G087000 Sobic004G240400 Sobic004G240400 Sobic009G107300--Sobic004G240400 Sobic008G116700 Sobic008G116700 Sobic009G107300--Sobic008G116700 Sobic003G043000 Sobic003G043000 Sobic009G107300--Sobic003G043000 Sobic004G198600 Sobic004G198600 Sobic009G107300--Sobic004G198600 Sobic009G107300--Sobic003G120300 Sobic003G181700 Sobic003G181700 Sobic009G107300--Sobic003G181700 Sobic001G156900 Sobic001G156900 Sobic009G107300--Sobic001G156900 Sobic007G000300 Sobic007G000300 Sobic010G066400--Sobic007G000300 Sobic010G033600 Sobic010G033600 Sobic010G066400--Sobic010G033600 Sobic001G393900 Sobic001G393900 Sobic010G066400--Sobic001G393900 Sobic003G362900 Sobic003G362900 Sobic010G066400--Sobic003G362900 Sobic003G012000 Sobic003G012000 Sobic010G066400--Sobic003G012000 Sobic005G026400 Sobic005G026400 Sobic010G066400--Sobic005G026400 Sobic006G169500 Sobic006G169500 Sobic010G066400--Sobic006G169500 Sobic002G155000 Sobic002G155000 Sobic010G066400--Sobic002G155000 Sobic002G292800 Sobic002G292800 Sobic010G066400--Sobic002G292800 Sobic010G279300--Sobic008G123300 Sobic010G279300--Sobic002G239601 Sobic006G225100 Sobic006G225100 Sobic010G279300--Sobic006G225100 Sobic001G300900 Sobic001G300900 Sobic010G279300--Sobic001G300900 Sobic007G070000 Sobic007G070000 Sobic010G279300--Sobic007G070000 Sobic008G125100 Sobic008G125100 Sobic010G279300--Sobic008G125100 Sobic001G495400 Sobic001G495400 Sobic010G279300--Sobic001G495400 Sobic006G273900 Sobic006G273900 Sobic010G279300--Sobic006G273900 Sobic008G058000 Sobic008G058000 Sobic010G279300--Sobic008G058000 Sobic006G269800 Sobic006G269800 Sobic001G417500--Sobic006G269800 Sobic004G351800 Sobic004G351800 Sobic001G417500--Sobic004G351800 Sobic003G309050 Sobic003G309050 Sobic001G417500--Sobic003G309050 Sobic002G043100 Sobic002G043100 Sobic001G417500--Sobic002G043100 Sobic001G417500--Sobic001G393900 Sobic008G017100 Sobic008G017100 Sobic001G417500--Sobic008G017100 Sobic004G107200 Sobic004G107200 Sobic001G417500--Sobic004G107200 Sobic007G173500 Sobic007G173500 Sobic001G417500--Sobic007G173500 Sobic001G417500--Sobic007G000300 Sobic001G503200--Sobic002G031500 Sobic003G188600 Sobic003G188600 Sobic001G503200--Sobic003G188600 Sobic003G272700 Sobic003G272700 Sobic001G503200--Sobic003G272700 Sobic001G503200--Sobic003G360300 Sobic003G032600 Sobic003G032600 Sobic001G503200--Sobic003G032600 Sobic001G191900 Sobic001G191900 Sobic001G503200--Sobic001G191900 Sobic002G076100 Sobic002G076100 Sobic001G503200--Sobic002G076100 Sobic001G503200--Sobic004G356200 Sobic003G050700 Sobic003G050700 Sobic001G503200--Sobic003G050700 Sobic009G260650 Sobic009G260650 Sobic002G060600--Sobic009G260650 Sobic002G263300 Sobic002G263300 Sobic002G060600--Sobic002G263300 Sobic003G212900 Sobic003G212900 Sobic002G060600--Sobic003G212900 Sobic002G060600--Sobic009G228000 Sobic010G269300 Sobic010G269300 Sobic002G060600--Sobic010G269300 Sobic002G063900 Sobic002G063900 Sobic002G060600--Sobic002G063900 Sobic009G000400 Sobic009G000400 Sobic002G060600--Sobic009G000400 Sobic003G297500 Sobic003G297500 Sobic002G060600--Sobic003G297500 Sobic002G234600 Sobic002G234600 Sobic002G060600--Sobic002G234600
Octagon: transcription factors


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