Gene annotation
Transcriptome id Sobic.005G163301.1
Synonym -
Functional annotation -
UniProt A0A1Z5RIW8
Pfam PF08387
Panther DB PTHR32212 PTHR32212:SF91
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g36520.1 : OsFBX248 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G042800 expressed protein -
2 Sobic.001G376200 auxin response factor, putative, expressed -
3 Sobic.003G120300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
4 Sobic.004G208900 RNA-binding protein Luc7-like, putative, expressed -
5 Sobic.002G278000 endonuclease/exonuclease/phosphatase family protein, putative, expressed K10772: AP endonuclease 2
6 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
7 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
8 Sobic.008G028700 SET domain containing protein, expressed -
9 Sobic.007G147400 - -
10 Sobic.003G297500 glucosidase 2 subunit beta precursor, putative, expressed K08288: protein kinase C substrate 80K-H
11 Sobic.005G013200 BAH domain containing protein, expressed -
12 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -
13 Sobic.008G113100 protein binding protein, putative, expressed -
14 Sobic.001G347300 splicing factor, arginine/serine-rich 16, putative, expressed K13168: splicing factor, arginine/serine-rich 16
15 Sobic.002G151300 - -
16 Sobic.001G455600 cysteine synthase, putative, expressed K01738: cysteine synthase
17 Sobic.002G188600 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
18 Sobic.003G180900 SLT1 protein, putative, expressed -
19 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
20 Sobic.001G094600 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic005G163301 Sobic005G163301 Sobic002G042800 Sobic002G042800 Sobic005G163301--Sobic002G042800 Sobic001G376200 Sobic001G376200 Sobic005G163301--Sobic001G376200 Sobic003G120300 Sobic003G120300 Sobic005G163301--Sobic003G120300 Sobic004G208900 Sobic004G208900 Sobic005G163301--Sobic004G208900 Sobic002G278000 Sobic002G278000 Sobic005G163301--Sobic002G278000 Sobic002G103600 Sobic002G103600 Sobic005G163301--Sobic002G103600 Sobic006G116100 Sobic006G116100 Sobic005G163301--Sobic006G116100 Sobic008G028700 Sobic008G028700 Sobic005G163301--Sobic008G028700 Sobic007G147400 Sobic007G147400 Sobic005G163301--Sobic007G147400 Sobic002G042800--Sobic008G028700 Sobic001G456900 Sobic001G456900 Sobic002G042800--Sobic001G456900 Sobic006G216100 Sobic006G216100 Sobic002G042800--Sobic006G216100 Sobic002G408200 Sobic002G408200 Sobic002G042800--Sobic002G408200 Sobic001G094600 Sobic001G094600 Sobic002G042800--Sobic001G094600 Sobic010G243900 Sobic010G243900 Sobic002G042800--Sobic010G243900 Sobic010G279450 Sobic010G279450 Sobic002G042800--Sobic010G279450 Sobic008G113100 Sobic008G113100 Sobic002G042800--Sobic008G113100 Sobic002G042800--Sobic002G103600 Sobic003G444800 Sobic003G444800 Sobic001G376200--Sobic003G444800 Sobic002G016200 Sobic002G016200 Sobic001G376200--Sobic002G016200 SobicK028600 SobicK028600 Sobic001G376200--SobicK028600 Sobic001G376200--Sobic007G147400 Sobic009G192300 Sobic009G192300 Sobic001G376200--Sobic009G192300 Sobic001G308400 Sobic001G308400 Sobic001G376200--Sobic001G308400 Sobic010G169900 Sobic010G169900 Sobic001G376200--Sobic010G169900 Sobic010G226000 Sobic010G226000 Sobic001G376200--Sobic010G226000 Sobic001G376200--Sobic002G103600 Sobic002G424900 Sobic002G424900 Sobic003G120300--Sobic002G424900 Sobic009G129100 Sobic009G129100 Sobic003G120300--Sobic009G129100 Sobic003G120300--Sobic006G216100 Sobic001G455600 Sobic001G455600 Sobic003G120300--Sobic001G455600 Sobic010G034100 Sobic010G034100 Sobic003G120300--Sobic010G034100 Sobic009G107300 Sobic009G107300 Sobic003G120300--Sobic009G107300 Sobic007G017800 Sobic007G017800 Sobic003G120300--Sobic007G017800 Sobic003G120300--Sobic002G042800 Sobic002G425500 Sobic002G425500 Sobic003G120300--Sobic002G425500 Sobic009G040600 Sobic009G040600 Sobic004G208900--Sobic009G040600 Sobic010G277500 Sobic010G277500 Sobic004G208900--Sobic010G277500 Sobic003G052200 Sobic003G052200 Sobic004G208900--Sobic003G052200 Sobic010G139000 Sobic010G139000 Sobic004G208900--Sobic010G139000 Sobic004G208900--Sobic008G113100 Sobic002G006900 Sobic002G006900 Sobic004G208900--Sobic002G006900 Sobic004G208900--Sobic008G028700 Sobic003G280800 Sobic003G280800 Sobic004G208900--Sobic003G280800 Sobic009G126400 Sobic009G126400 Sobic004G208900--Sobic009G126400 Sobic002G063900 Sobic002G063900 Sobic002G278000--Sobic002G063900 Sobic002G278000--Sobic006G116100 Sobic005G013200 Sobic005G013200 Sobic002G278000--Sobic005G013200 Sobic001G511500 Sobic001G511500 Sobic002G278000--Sobic001G511500 Sobic008G149800 Sobic008G149800 Sobic002G278000--Sobic008G149800 Sobic005G015900 Sobic005G015900 Sobic002G278000--Sobic005G015900 Sobic002G278000--Sobic008G028700 Sobic008G173100 Sobic008G173100 Sobic002G278000--Sobic008G173100 Sobic001G167200 Sobic001G167200 Sobic002G278000--Sobic001G167200 Sobic002G103600--Sobic003G444800 Sobic002G103600--Sobic005G013200 Sobic002G103600--SobicK028600 Sobic003G059750 Sobic003G059750 Sobic002G103600--Sobic003G059750 Sobic001G311500 Sobic001G311500 Sobic002G103600--Sobic001G311500 Sobic009G247400 Sobic009G247400 Sobic002G103600--Sobic009G247400 Sobic002G103600--Sobic002G408200 Sobic002G103600--Sobic008G028700 Sobic007G042400 Sobic007G042400 Sobic002G103600--Sobic007G042400 Sobic008G153000 Sobic008G153000 Sobic006G116100--Sobic008G153000 Sobic006G116100--Sobic008G149800 Sobic006G116100--Sobic008G173100 Sobic003G160000 Sobic003G160000 Sobic006G116100--Sobic003G160000 Sobic006G116100--Sobic002G063900 Sobic002G357700 Sobic002G357700 Sobic006G116100--Sobic002G357700 Sobic003G241200 Sobic003G241200 Sobic006G116100--Sobic003G241200 Sobic009G119000 Sobic009G119000 Sobic006G116100--Sobic009G119000 Sobic003G416700 Sobic003G416700 Sobic006G116100--Sobic003G416700 Sobic008G028700--Sobic010G279450 Sobic008G028700--Sobic009G040600 Sobic004G009600 Sobic004G009600 Sobic008G028700--Sobic004G009600 Sobic004G258700 Sobic004G258700 Sobic008G028700--Sobic004G258700 Sobic007G065400 Sobic007G065400 Sobic008G028700--Sobic007G065400 Sobic008G028700--Sobic010G139000 Sobic008G028700--Sobic002G006900 Sobic002G145101 Sobic002G145101 Sobic008G028700--Sobic002G145101 Sobic008G028700--Sobic008G113100 Sobic007G147400--SobicK028600 Sobic007G147400--Sobic002G063900 Sobic002G317400 Sobic002G317400 Sobic007G147400--Sobic002G317400 Sobic007G147400--Sobic003G444800 Sobic007G147400--Sobic001G376200 Sobic002G147100 Sobic002G147100 Sobic007G147400--Sobic002G147100 Sobic007G147400--Sobic002G103600 Sobic003G039900 Sobic003G039900 Sobic007G147400--Sobic003G039900 Sobic007G147400--Sobic002G357700
Octagon: transcription factors


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