Gene annotation
Transcriptome id Sobic.001G417500.5,Sobic.001G417500.4
Synonym
Functional annotation expressed protein
UniProt A0A1Z5SA38 , A0A1Z5SA59
Pfam PF16135
Panther DB PTHR24098 PTHR24098:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37520 : Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
RAP-DB (Rice) LOC_Os03g17050.1 : expressed protein
MaizeGDB (Corn) Zm00025a000887 , Zm00025a001879
Brachypodium KQK22308 , KQK22309 , PNT77659 , PNT77658 , PNT77657 , KQK22310
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
2 Sobic.004G351800 PPR repeat containing protein, expressed -
3 Sobic.003G309050 - -
4 Sobic.002G043100 histone deacetylase, putative, expressed K11407: histone deacetylase 6
5 Sobic.001G393900 FAD binding domain containing protein, expressed -
6 Sobic.008G017100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
7 Sobic.004G107200 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
8 Sobic.007G173500 growth regulator related protein, putative, expressed -
9 Sobic.007G000300 expressed protein -
10 Sobic.006G013100 expressed protein K13205: AAR2, A1 cistron-splicing factor AAR2
11 Sobic.004G124300 tesmin/TSO1-like CXC domain containing protein, expressed -
12 Sobic.006G137600 AT hook motif family protein, expressed -
13 Sobic.002G155000 EMB1381, putative, expressed -
14 Sobic.006G029100 actin, putative, expressed K11673: ACTR8, ARP8, actin-related protein 8
15 Sobic.001G501800 ZOS1-20 - C2H2 zinc finger protein, expressed -
16 Sobic.001G495400 PPR repeat domain containing protein, putative, expressed -
17 Sobic.003G120300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
18 Sobic.002G317100 PPR repeat containing protein, expressed -
19 Sobic.003G052800 RST1, putative, expressed -
20 Sobic.010G130100 BAH domain containing protein, expressed -


Gene co-expression network
sample Sobic001G417500 Sobic001G417500 Sobic006G269800 Sobic006G269800 Sobic001G417500--Sobic006G269800 Sobic004G351800 Sobic004G351800 Sobic001G417500--Sobic004G351800 Sobic003G309050 Sobic003G309050 Sobic001G417500--Sobic003G309050 Sobic002G043100 Sobic002G043100 Sobic001G417500--Sobic002G043100 Sobic001G393900 Sobic001G393900 Sobic001G417500--Sobic001G393900 Sobic008G017100 Sobic008G017100 Sobic001G417500--Sobic008G017100 Sobic004G107200 Sobic004G107200 Sobic001G417500--Sobic004G107200 Sobic007G173500 Sobic007G173500 Sobic001G417500--Sobic007G173500 Sobic007G000300 Sobic007G000300 Sobic001G417500--Sobic007G000300 Sobic002G145800 Sobic002G145800 Sobic006G269800--Sobic002G145800 Sobic003G052800 Sobic003G052800 Sobic006G269800--Sobic003G052800 Sobic008G147200 Sobic008G147200 Sobic006G269800--Sobic008G147200 Sobic006G269800--Sobic008G017100 Sobic006G269800--Sobic001G393900 Sobic006G269800--Sobic002G043100 Sobic006G269800--Sobic001G417500 Sobic006G269800--Sobic004G107200 Sobic002G425500 Sobic002G425500 Sobic006G269800--Sobic002G425500 Sobic004G351800--Sobic001G417500 Sobic004G351800--Sobic008G017100 Sobic001G261900 Sobic001G261900 Sobic004G351800--Sobic001G261900 Sobic004G351800--Sobic006G269800 Sobic004G351800--Sobic004G107200 Sobic002G052400 Sobic002G052400 Sobic004G351800--Sobic002G052400 Sobic001G326300 Sobic001G326300 Sobic004G351800--Sobic001G326300 Sobic004G351800--Sobic007G173500 Sobic006G128400 Sobic006G128400 Sobic004G351800--Sobic006G128400 Sobic001G451300 Sobic001G451300 Sobic003G309050--Sobic001G451300 Sobic003G309050--Sobic001G393900 Sobic003G309050--Sobic002G043100 Sobic002G399800 Sobic002G399800 Sobic003G309050--Sobic002G399800 Sobic002G371600 Sobic002G371600 Sobic003G309050--Sobic002G371600 Sobic006G245900 Sobic006G245900 Sobic003G309050--Sobic006G245900 Sobic003G309050--Sobic001G417500 Sobic003G260400 Sobic003G260400 Sobic003G309050--Sobic003G260400 Sobic010G262100 Sobic010G262100 Sobic003G309050--Sobic010G262100 Sobic002G043100--Sobic004G107200 Sobic002G043100--Sobic001G451300 Sobic001G501800 Sobic001G501800 Sobic002G043100--Sobic001G501800 Sobic002G043100--Sobic002G399800 Sobic002G043100--Sobic010G262100 Sobic002G043100--Sobic006G269800 Sobic002G043100--Sobic003G309050 Sobic002G043100--Sobic002G425500 Sobic002G043100--Sobic001G393900 Sobic004G321700 Sobic004G321700 Sobic001G393900--Sobic004G321700 Sobic006G267600 Sobic006G267600 Sobic001G393900--Sobic006G267600 Sobic001G089600 Sobic001G089600 Sobic001G393900--Sobic001G089600 Sobic001G393900--Sobic002G399800 Sobic004G096400 Sobic004G096400 Sobic001G393900--Sobic004G096400 Sobic001G393900--Sobic007G173500 Sobic001G393900--Sobic006G269800 Sobic001G393900--Sobic003G309050 Sobic003G042400 Sobic003G042400 Sobic001G393900--Sobic003G042400 Sobic004G119400 Sobic004G119400 Sobic008G017100--Sobic004G119400 Sobic008G017100--Sobic006G269800 Sobic010G224700 Sobic010G224700 Sobic008G017100--Sobic010G224700 Sobic006G185200 Sobic006G185200 Sobic008G017100--Sobic006G185200 Sobic002G079100 Sobic002G079100 Sobic008G017100--Sobic002G079100 Sobic002G378100 Sobic002G378100 Sobic008G017100--Sobic002G378100 Sobic008G017100--Sobic004G351800 Sobic007G171100 Sobic007G171100 Sobic008G017100--Sobic007G171100 Sobic008G017100--Sobic008G147200 Sobic002G431400 Sobic002G431400 Sobic004G107200--Sobic002G431400 Sobic004G107200--Sobic002G425500 Sobic006G119400 Sobic006G119400 Sobic004G107200--Sobic006G119400 Sobic003G101500 Sobic003G101500 Sobic004G107200--Sobic003G101500 Sobic004G107200--Sobic002G043100 Sobic004G107200--Sobic001G501800 Sobic001G456900 Sobic001G456900 Sobic004G107200--Sobic001G456900 Sobic004G107200--Sobic001G261900 Sobic004G107200--Sobic006G269800 Sobic007G173500--Sobic001G393900 Sobic001G020000 Sobic001G020000 Sobic007G173500--Sobic001G020000 Sobic007G212300 Sobic007G212300 Sobic007G173500--Sobic007G212300 Sobic003G095900 Sobic003G095900 Sobic007G173500--Sobic003G095900 Sobic007G173500--Sobic003G260400 Sobic004G309900 Sobic004G309900 Sobic007G173500--Sobic004G309900 Sobic003G016900 Sobic003G016900 Sobic007G173500--Sobic003G016900 Sobic004G124300 Sobic004G124300 Sobic007G173500--Sobic004G124300 Sobic006G096900 Sobic006G096900 Sobic007G173500--Sobic006G096900 Sobic001G275300 Sobic001G275300 Sobic007G000300--Sobic001G275300 Sobic003G241700 Sobic003G241700 Sobic007G000300--Sobic003G241700 Sobic007G000300--Sobic001G393900 Sobic006G088200 Sobic006G088200 Sobic007G000300--Sobic006G088200 Sobic003G062300 Sobic003G062300 Sobic007G000300--Sobic003G062300 Sobic007G000300--Sobic003G016900 Sobic007G000300--Sobic001G261900 Sobic007G000300--Sobic007G212300 Sobic007G000300--Sobic007G173500
Octagon: transcription factors


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