Gene annotation
Transcriptome id Sobic.002G068900.1
Synonym RAB8A, ARA-3, ATRABE1C, ARA3, ATRAB8A, Sb02g005790
Functional annotation ras-related protein, putative, expressed
UniProt C5XCK1
Pfam PF00025
Panther DB PTHR24073 PTHR24073:SF561
NCBI CDD KOG0078; GTP-binding protein SEC4, small G protein superfamily, and related Ras family GTP-binding proteins
KEGG Orthology K07901; RAB8A, Ras-related protein Rab-8A
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT3G46060 : RAB GTPase homolog 8A
RAP-DB (Rice) LOC_Os07g09680.1 : ras-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a016021 , Zm00025a045308
Brachypodium KQK20459
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G068900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
2 Sobic.004G188600 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
3 Sobic.002G424000 transcription factor, putative, expressed K14431: transcription factor TGA
4 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
5 Sobic.005G229500 GRAS family transcription factor domain containing protein, expressed -
6 Sobic.003G305200 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed K01126: E3.1.4.46, glpQ, glycerophosphoryl diester phosphodiesterase
7 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
8 Sobic.009G249200 transmembrane protein, putative, expressed -
9 Sobic.010G264200 UPF0183 protein, putative, expressed -
10 Sobic.010G130200 BPI/LBP family protein At3g20270 precursor, putative, expressed K05399: lipopolysaccharide-binding protein
11 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
12 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
13 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
14 Sobic.005G029100 PP2A regulatory subunit TAP46, putative, expressed -
15 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
16 Sobic.001G270400 OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed -
17 Sobic.001G290000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
18 Sobic.009G138100 disease resistance protein RGA3, putative, expressed -
19 Sobic.005G157000 expressed protein -
20 Sobic.001G253700 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4


Gene co-expression network
sample Sobic002G068900 Sobic002G068900 Sobic001G323000 Sobic001G323000 Sobic002G068900--Sobic001G323000 Sobic004G188600 Sobic004G188600 Sobic002G068900--Sobic004G188600 Sobic002G424000 Sobic002G424000 Sobic002G068900--Sobic002G424000 Sobic007G024700 Sobic007G024700 Sobic002G068900--Sobic007G024700 Sobic005G229500 Sobic005G229500 Sobic002G068900--Sobic005G229500 Sobic003G305200 Sobic003G305200 Sobic002G068900--Sobic003G305200 Sobic001G390800 Sobic001G390800 Sobic002G068900--Sobic001G390800 Sobic009G249200 Sobic009G249200 Sobic002G068900--Sobic009G249200 Sobic010G264200 Sobic010G264200 Sobic002G068900--Sobic010G264200 Sobic001G206900 Sobic001G206900 Sobic001G323000--Sobic001G206900 Sobic006G034000 Sobic006G034000 Sobic001G323000--Sobic006G034000 Sobic009G228700 Sobic009G228700 Sobic001G323000--Sobic009G228700 Sobic001G057800 Sobic001G057800 Sobic001G323000--Sobic001G057800 Sobic003G312200 Sobic003G312200 Sobic001G323000--Sobic003G312200 Sobic006G148200 Sobic006G148200 Sobic001G323000--Sobic006G148200 Sobic009G207000 Sobic009G207000 Sobic001G323000--Sobic009G207000 Sobic010G000900 Sobic010G000900 Sobic001G323000--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic001G323000--Sobic001G085100 Sobic004G188600--Sobic005G229500 Sobic004G188600--Sobic002G068900 Sobic003G354400 Sobic003G354400 Sobic004G188600--Sobic003G354400 Sobic009G126900 Sobic009G126900 Sobic004G188600--Sobic009G126900 Sobic006G049300 Sobic006G049300 Sobic004G188600--Sobic006G049300 Sobic009G152700 Sobic009G152700 Sobic004G188600--Sobic009G152700 Sobic003G329400 Sobic003G329400 Sobic004G188600--Sobic003G329400 Sobic003G366400 Sobic003G366400 Sobic004G188600--Sobic003G366400 Sobic008G144401 Sobic008G144401 Sobic004G188600--Sobic008G144401 Sobic004G006200 Sobic004G006200 Sobic002G424000--Sobic004G006200 Sobic003G433100 Sobic003G433100 Sobic002G424000--Sobic003G433100 Sobic002G424000--Sobic007G024700 Sobic002G424000--Sobic009G207000 Sobic003G352600 Sobic003G352600 Sobic002G424000--Sobic003G352600 Sobic001G137100 Sobic001G137100 Sobic002G424000--Sobic001G137100 Sobic002G130800 Sobic002G130800 Sobic002G424000--Sobic002G130800 Sobic002G132000 Sobic002G132000 Sobic002G424000--Sobic002G132000 Sobic002G424000--Sobic001G390800 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic009G094300 Sobic009G094300 Sobic007G024700--Sobic009G094300 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic005G229500--Sobic004G188600 Sobic005G229500--Sobic002G068900 Sobic008G075900 Sobic008G075900 Sobic005G229500--Sobic008G075900 Sobic005G229500--Sobic006G049300 Sobic001G120300 Sobic001G120300 Sobic005G229500--Sobic001G120300 Sobic009G125600 Sobic009G125600 Sobic005G229500--Sobic009G125600 Sobic005G229500--Sobic003G354400 Sobic002G411300 Sobic002G411300 Sobic005G229500--Sobic002G411300 Sobic004G153501 Sobic004G153501 Sobic005G229500--Sobic004G153501 Sobic003G305200--Sobic007G024700 Sobic010G130200 Sobic010G130200 Sobic003G305200--Sobic010G130200 Sobic001G427100 Sobic001G427100 Sobic003G305200--Sobic001G427100 Sobic006G083600 Sobic006G083600 Sobic003G305200--Sobic006G083600 Sobic003G305200--Sobic002G132000 Sobic004G295800 Sobic004G295800 Sobic003G305200--Sobic004G295800 Sobic003G305200--Sobic009G094300 Sobic003G305200--Sobic002G270500 Sobic003G305200--Sobic003G329400 Sobic001G268200 Sobic001G268200 Sobic001G390800--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic001G390800--Sobic001G121200 Sobic003G313500 Sobic003G313500 Sobic001G390800--Sobic003G313500 Sobic010G205800 Sobic010G205800 Sobic001G390800--Sobic010G205800 Sobic001G085300 Sobic001G085300 Sobic001G390800--Sobic001G085300 Sobic010G147100 Sobic010G147100 Sobic001G390800--Sobic010G147100 Sobic007G075400 Sobic007G075400 Sobic001G390800--Sobic007G075400 Sobic010G139600 Sobic010G139600 Sobic001G390800--Sobic010G139600 Sobic001G050200 Sobic001G050200 Sobic001G390800--Sobic001G050200 Sobic009G249200--Sobic007G024700 Sobic001G409600 Sobic001G409600 Sobic009G249200--Sobic001G409600 Sobic006G237400 Sobic006G237400 Sobic009G249200--Sobic006G237400 Sobic009G166300 Sobic009G166300 Sobic009G249200--Sobic009G166300 Sobic004G021100 Sobic004G021100 Sobic009G249200--Sobic004G021100 Sobic009G249200--Sobic010G205800 Sobic003G408500 Sobic003G408500 Sobic009G249200--Sobic003G408500 Sobic002G315200 Sobic002G315200 Sobic009G249200--Sobic002G315200 Sobic009G027300 Sobic009G027300 Sobic009G249200--Sobic009G027300 Sobic010G264200--Sobic007G024700 Sobic010G264200--Sobic010G130200 Sobic002G382600 Sobic002G382600 Sobic010G264200--Sobic002G382600 Sobic010G264200--Sobic009G249200 Sobic001G124200 Sobic001G124200 Sobic010G264200--Sobic001G124200 Sobic010G020300 Sobic010G020300 Sobic010G264200--Sobic010G020300 Sobic001G466700 Sobic001G466700 Sobic010G264200--Sobic001G466700 Sobic001G436900 Sobic001G436900 Sobic010G264200--Sobic001G436900 Sobic010G264200--Sobic006G083600
Octagon: transcription factors


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