Gene annotation
Transcriptome id Sobic.002G072000.1,Sobic.002G072000.7,Sobic.002G072000.6,Sobic.002G072000.5
Synonym RPS3, RPM1, Sb02g006060
Functional annotation resistance protein, putative, expressed
UniProt C5XCP0
Pfam PF00931 PF13191 PF13191 PF00931
Panther DB PTHR23155 PTHR23155:SF529 PTHR23155:SF529 PTHR23155
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os08g42670.1,LOC_Os08g42670.2 : resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT64146 , PNT72037 , PNT72042 , PNT72041 , PNT72040
Barley HORVU7Hr1G021740.13 , HORVU7Hr1G021740.12 , HORVU7Hr1G021740.10 , HORVU7Hr1G055790.3 , HORVU7Hr1G055790.2 , HORVU7Hr1G055790.1 , HORVU7Hr1G055790.4 , HORVU7Hr1G021740.8 , HORVU7Hr1G021740.7 , HORVU7Hr1G021740.6 , HORVU7Hr1G021740.5 , HORVU7Hr1G021740.2 , HORVU7Hr1G021740.1 , HORVU7Hr1G021740.9 , HORVU7Hr1G021680.2 , HORVU7Hr1G021680.1
Wheat TraesCS7A02G101700 , TraesCS7A02G101700 , TraesCS4A02G400300 , TraesCS7A02G022700 , TraesCS6A02G068600 , TraesCS2D02G026200 , TraesCSU02G059400 , TraesCS4A02G463000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G062900 structural constituent of ribosome, putative, expressed -
2 Sobic.004G094500 histone deacetylase, putative, expressed K11418: histone deacetylase 11
3 Sobic.009G004700 stripe rust resistance protein Yr10, putative, expressed -
4 Sobic.006G159900 DTA2, putative, expressed -
5 Sobic.001G464200 flap endonuclease, putative, expressed K10846: ERCC5, XPG, DNA excision repair protein ERCC-5
6 Sobic.001G454401 - -
7 Sobic.006G145000 disease resistance RPP13-like protein 1, putative, expressed -
8 Sobic.005G110523 - -
9 Sobic.006G209850 - -
10 Sobic.007G054000 powdery mildew resistance protein PM3b, putative, expressed -
11 Sobic.001G544200 endonuclease, putative, expressed K10848: ERCC4, DNA excision repair protein ERCC-4
12 Sobic.002G144966 - K02997: RP-S9e, small subunit ribosomal protein S9e
13 Sobic.006G021250 - -
14 Sobic.001G477800 expressed protein -
15 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
16 Sobic.005G046500 protein kinase family protein, putative, expressed -
17 Sobic.001G511500 RNA recognition motif containing protein, putative, expressed K12837: splicing factor U2AF 65 kDa subunit
18 Sobic.005G005000 cysteine-rich receptor-like protein kinase 4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
19 Sobic.006G246900 expressed protein -
20 Sobic.006G196000 expressed protein -


Gene co-expression network
sample Sobic002G072000 Sobic002G072000 Sobic009G062900 Sobic009G062900 Sobic002G072000--Sobic009G062900 Sobic004G094500 Sobic004G094500 Sobic002G072000--Sobic004G094500 Sobic009G004700 Sobic009G004700 Sobic002G072000--Sobic009G004700 Sobic006G159900 Sobic006G159900 Sobic002G072000--Sobic006G159900 Sobic001G464200 Sobic001G464200 Sobic002G072000--Sobic001G464200 Sobic001G454401 Sobic001G454401 Sobic002G072000--Sobic001G454401 Sobic006G145000 Sobic006G145000 Sobic002G072000--Sobic006G145000 Sobic005G110523 Sobic005G110523 Sobic002G072000--Sobic005G110523 Sobic006G209850 Sobic006G209850 Sobic002G072000--Sobic006G209850 Sobic004G145500 Sobic004G145500 Sobic009G062900--Sobic004G145500 Sobic009G062900--Sobic002G072000 Sobic004G031700 Sobic004G031700 Sobic009G062900--Sobic004G031700 Sobic001G544200 Sobic001G544200 Sobic009G062900--Sobic001G544200 Sobic001G094000 Sobic001G094000 Sobic009G062900--Sobic001G094000 Sobic008G133400 Sobic008G133400 Sobic009G062900--Sobic008G133400 Sobic009G062900--Sobic001G464200 Sobic004G138000 Sobic004G138000 Sobic009G062900--Sobic004G138000 Sobic009G005100 Sobic009G005100 Sobic009G062900--Sobic009G005100 Sobic001G394400 Sobic001G394400 Sobic004G094500--Sobic001G394400 Sobic001G477800 Sobic001G477800 Sobic004G094500--Sobic001G477800 Sobic007G037900 Sobic007G037900 Sobic004G094500--Sobic007G037900 Sobic004G094500--Sobic002G072000 Sobic006G246900 Sobic006G246900 Sobic004G094500--Sobic006G246900 Sobic008G078100 Sobic008G078100 Sobic004G094500--Sobic008G078100 Sobic006G048775 Sobic006G048775 Sobic004G094500--Sobic006G048775 Sobic002G151600 Sobic002G151600 Sobic004G094500--Sobic002G151600 Sobic004G094500--Sobic005G110523 Sobic009G113600 Sobic009G113600 Sobic009G004700--Sobic009G113600 Sobic003G089650 Sobic003G089650 Sobic009G004700--Sobic003G089650 Sobic002G062300 Sobic002G062300 Sobic009G004700--Sobic002G062300 Sobic009G004700--Sobic005G110523 Sobic007G059300 Sobic007G059300 Sobic009G004700--Sobic007G059300 Sobic009G026400 Sobic009G026400 Sobic009G004700--Sobic009G026400 Sobic006G009400 Sobic006G009400 Sobic009G004700--Sobic006G009400 Sobic005G212500 Sobic005G212500 Sobic009G004700--Sobic005G212500 Sobic003G031750 Sobic003G031750 Sobic009G004700--Sobic003G031750 Sobic006G128900 Sobic006G128900 Sobic006G159900--Sobic006G128900 Sobic006G159900--Sobic001G477800 Sobic001G511500 Sobic001G511500 Sobic006G159900--Sobic001G511500 Sobic006G159900--Sobic004G031700 Sobic005G177800 Sobic005G177800 Sobic006G159900--Sobic005G177800 Sobic007G000100 Sobic007G000100 Sobic006G159900--Sobic007G000100 Sobic001G543800 Sobic001G543800 Sobic006G159900--Sobic001G543800 Sobic008G054500 Sobic008G054500 Sobic006G159900--Sobic008G054500 Sobic006G159900--Sobic008G078100 Sobic002G158700 Sobic002G158700 Sobic001G464200--Sobic002G158700 Sobic001G464200--Sobic001G544200 Sobic001G464200--Sobic004G031700 Sobic001G464200--Sobic001G477800 Sobic001G464200--Sobic006G128900 Sobic002G144966 Sobic002G144966 Sobic001G464200--Sobic002G144966 Sobic001G464200--Sobic001G511500 Sobic010G263800 Sobic010G263800 Sobic001G464200--Sobic010G263800 Sobic003G445400 Sobic003G445400 Sobic001G464200--Sobic003G445400 Sobic001G111900 Sobic001G111900 Sobic001G454401--Sobic001G111900 Sobic001G454401--Sobic006G009400 Sobic006G262200 Sobic006G262200 Sobic001G454401--Sobic006G262200 Sobic009G127900 Sobic009G127900 Sobic001G454401--Sobic009G127900 Sobic005G110427 Sobic005G110427 Sobic001G454401--Sobic005G110427 Sobic005G055150 Sobic005G055150 Sobic001G454401--Sobic005G055150 Sobic001G454401--Sobic006G145000 Sobic001G454401--Sobic002G144966 Sobic005G141801 Sobic005G141801 Sobic001G454401--Sobic005G141801 Sobic009G040700 Sobic009G040700 Sobic006G145000--Sobic009G040700 Sobic005G077466 Sobic005G077466 Sobic006G145000--Sobic005G077466 Sobic006G145000--Sobic001G094000 Sobic004G357200 Sobic004G357200 Sobic006G145000--Sobic004G357200 Sobic006G145000--Sobic006G246900 Sobic007G011400 Sobic007G011400 Sobic006G145000--Sobic007G011400 Sobic006G145000--Sobic006G009400 Sobic007G205800 Sobic007G205800 Sobic006G145000--Sobic007G205800 Sobic006G145000--Sobic006G128900 Sobic005G110523--Sobic009G004700 Sobic005G110523--Sobic006G009400 Sobic005G005000 Sobic005G005000 Sobic005G110523--Sobic005G005000 Sobic005G110523--Sobic001G477800 Sobic005G110523--Sobic001G464200 Sobic005G110523--Sobic007G059300 Sobic004G169501 Sobic004G169501 Sobic005G110523--Sobic004G169501 Sobic005G110523--Sobic003G089650 Sobic005G110523--Sobic009G113600 Sobic006G209850--Sobic006G128900 Sobic006G209850--Sobic001G511500 Sobic003G280800 Sobic003G280800 Sobic006G209850--Sobic003G280800 Sobic010G277500 Sobic010G277500 Sobic006G209850--Sobic010G277500 Sobic008G024600 Sobic008G024600 Sobic006G209850--Sobic008G024600 Sobic002G053000 Sobic002G053000 Sobic006G209850--Sobic002G053000 Sobic010G129200 Sobic010G129200 Sobic006G209850--Sobic010G129200 Sobic006G209850--Sobic004G145500 Sobic002G243900 Sobic002G243900 Sobic006G209850--Sobic002G243900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.