Gene annotation
| Transcriptome id | Sobic.002G089700.1 |
|---|---|
| Synonym | Sb02g007420, CYP76C2 |
| Functional annotation | cytochrome P450, putative, expressed |
| UniProt | C5X210 |
| Pfam | PF00067 |
| Panther DB | PTHR24298 PTHR24298:SF124 |
| NCBI CDD | KOG0156; Cytochrome P450 CYP2 subfamily |
| KEGG Orthology | - |
| Gene Ontology | GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding |
Orthologs (automatic annotation)
| TAIR | AT1G33720 : cytochrome P450, family 76, subfamily C, polypeptide 6 |
|---|---|
| RAP-DB (Rice) | LOC_Os06g30640.1 : cytochrome P450, putative, expressed |
| MaizeGDB (Corn) | Zm00025a004587 |
| Brachypodium | KQJ93796 , KQJ93797 , PNT66075 , PNT66074 , PNT66073 , PNT68248 |
| Barley | HORVU6Hr1G010740.4 , HORVU6Hr1G010740.5 , HORVU6Hr1G010740.2 , HORVU6Hr1G010740.3 , HORVU6Hr1G010740.1 , HORVU6Hr1G092270.1 , HORVU6Hr1G092270.3 , HORVU6Hr1G092270.4 , HORVU7Hr1G021650.1 , HORVU7Hr1G021650.3 , HORVU7Hr1G021650.2 , HORVU7Hr1G021650.5 , HORVU7Hr1G021650.4 , HORVU7Hr1G021650.6 , HORVU3Hr1G078660.4 , HORVU3Hr1G078660.5 , HORVU3Hr1G078660.2 , HORVU3Hr1G078660.3 , HORVU3Hr1G078660.1 |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G225900 | expressed protein | - |
| 2 | Sobic.010G006700 | auxin-induced protein 5NG4, putative, expressed | - |
| 3 | Sobic.003G373150 | - | - |
| 4 | Sobic.003G078501 | - | - |
| 5 | Sobic.006G267900 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed | - |
| 6 | Sobic.003G141800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@polygalacturonase, putative, expressed | - |
| 7 | Sobic.005G087800 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed | K17506: PPM1L, protein phosphatase 1L |
| 8 | Sobic.001G125100 | pre-mRNA-splicing factor, putative, expressed | K12817: PRPF18, pre-mRNA-splicing factor 18 |
| 9 | Sobic.007G217300 | hsp20/alpha crystallin family protein, putative, expressed | K13993: HSP20 family protein |
| 10 | Sobic.002G427400 | COBRA-like protein 7 precursor, putative, expressed | - |
| 11 | Sobic.004G283201 | - | - |
| 12 | Sobic.009G000700 | Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed | - |
| 13 | Sobic.006G184800 | "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed | - |
| 14 | Sobic.007G166900 | auxin-induced protein 5NG4, putative, expressed | - |
| 15 | Sobic.004G310600 | Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed | - |
| 16 | Sobic.004G278200 | DUF581 domain containing protein, expressed | - |
| 17 | Sobic.002G189000 | homeobox associated leucine zipper, putative, expressed | K09338: homeobox-leucine zipper protein |
| 18 | Sobic.003G233900 | - | - |
| 19 | Sobic.001G430700 | expressed protein | - |
| 20 | Sobic.004G283300 | AP2 domain containing protein, expressed | - |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
