Gene annotation
Transcriptome id Sobic.002G093000.1
Synonym Sb02g007690
Functional annotation expressed protein
UniProt C5X244
Pfam -
Panther DB PTHR34564 PTHR34564:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22280 : -
RAP-DB (Rice) LOC_Os07g14650.1 : expressed protein
MaizeGDB (Corn) Zm00025a045524
Brachypodium KQK20240
Barley HORVU5Hr1G118080.1 , HORVU5Hr1G118090.1 , HORVU5Hr1G118080.3 , HORVU5Hr1G118080.2 , HORVU5Hr1G118090.2
Wheat TraesCS2B02G262100 , TraesCS5B02G516500 , TraesCS5D02G516600 , TraesCS5B02G516500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
2 Sobic.005G168100 ADP-ribosylation factor, putative, expressed K07950: ADP-ribosylation factor-like protein 5B
3 Sobic.001G533300 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
4 Sobic.010G199100 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.003G150000 split hand/foot malformation type 1, putative, expressed K10881: SHFM1, DSS1, 26 proteasome complex subunit DSS1
6 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
7 Sobic.008G185400 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
8 Sobic.003G367800 bolA, putative, expressed K05527: BolA family transcriptional regulator, general stress-responsive regulator
9 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
10 Sobic.001G353600 expressed protein -
11 Sobic.006G182100 ORM1, putative, expressed -
12 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
13 Sobic.010G041600 profilin domain containing protein, expressed K05759: profilin
14 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
15 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
16 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
17 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
18 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
19 Sobic.008G127500 expressed protein -
20 Sobic.003G306100 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase


Gene co-expression network
sample Sobic002G093000 Sobic002G093000 Sobic001G034700 Sobic001G034700 Sobic002G093000--Sobic001G034700 Sobic005G168100 Sobic005G168100 Sobic002G093000--Sobic005G168100 Sobic001G533300 Sobic001G533300 Sobic002G093000--Sobic001G533300 Sobic010G199100 Sobic010G199100 Sobic002G093000--Sobic010G199100 Sobic003G150000 Sobic003G150000 Sobic002G093000--Sobic003G150000 Sobic010G204600 Sobic010G204600 Sobic002G093000--Sobic010G204600 Sobic008G185400 Sobic008G185400 Sobic002G093000--Sobic008G185400 Sobic003G367800 Sobic003G367800 Sobic002G093000--Sobic003G367800 Sobic009G023200 Sobic009G023200 Sobic002G093000--Sobic009G023200 Sobic010G041600 Sobic010G041600 Sobic001G034700--Sobic010G041600 Sobic001G086300 Sobic001G086300 Sobic001G034700--Sobic001G086300 Sobic001G048832 Sobic001G048832 Sobic001G034700--Sobic001G048832 Sobic009G176000 Sobic009G176000 Sobic001G034700--Sobic009G176000 Sobic007G051000 Sobic007G051000 Sobic001G034700--Sobic007G051000 Sobic005G188100 Sobic005G188100 Sobic001G034700--Sobic005G188100 Sobic003G285800 Sobic003G285800 Sobic001G034700--Sobic003G285800 Sobic010G178200 Sobic010G178200 Sobic001G034700--Sobic010G178200 Sobic001G034700--Sobic003G150000 Sobic009G232900 Sobic009G232900 Sobic005G168100--Sobic009G232900 Sobic001G432000 Sobic001G432000 Sobic005G168100--Sobic001G432000 Sobic006G156000 Sobic006G156000 Sobic005G168100--Sobic006G156000 Sobic003G155400 Sobic003G155400 Sobic005G168100--Sobic003G155400 Sobic003G209000 Sobic003G209000 Sobic005G168100--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic005G168100--Sobic002G296200 Sobic002G418400 Sobic002G418400 Sobic005G168100--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic005G168100--Sobic003G215700 Sobic005G168100--Sobic003G150000 Sobic001G067601 Sobic001G067601 Sobic001G533300--Sobic001G067601 Sobic002G222900 Sobic002G222900 Sobic001G533300--Sobic002G222900 Sobic001G224400 Sobic001G224400 Sobic001G533300--Sobic001G224400 Sobic003G368500 Sobic003G368500 Sobic001G533300--Sobic003G368500 Sobic010G217900 Sobic010G217900 Sobic001G533300--Sobic010G217900 Sobic001G308700 Sobic001G308700 Sobic001G533300--Sobic001G308700 Sobic008G189300 Sobic008G189300 Sobic001G533300--Sobic008G189300 Sobic006G010600 Sobic006G010600 Sobic001G533300--Sobic006G010600 Sobic010G225300 Sobic010G225300 Sobic001G533300--Sobic010G225300 Sobic010G204300 Sobic010G204300 Sobic010G199100--Sobic010G204300 Sobic001G422900 Sobic001G422900 Sobic010G199100--Sobic001G422900 Sobic010G199100--Sobic001G067601 Sobic010G199100--Sobic002G093000 Sobic001G037000 Sobic001G037000 Sobic010G199100--Sobic001G037000 Sobic001G019900 Sobic001G019900 Sobic010G199100--Sobic001G019900 Sobic001G324900 Sobic001G324900 Sobic010G199100--Sobic001G324900 Sobic010G199100--Sobic010G204600 Sobic008G161000 Sobic008G161000 Sobic010G199100--Sobic008G161000 Sobic005G110800 Sobic005G110800 Sobic003G150000--Sobic005G110800 Sobic010G204500 Sobic010G204500 Sobic003G150000--Sobic010G204500 Sobic003G249700 Sobic003G249700 Sobic003G150000--Sobic003G249700 Sobic001G493001 Sobic001G493001 Sobic003G150000--Sobic001G493001 Sobic001G403500 Sobic001G403500 Sobic003G150000--Sobic001G403500 Sobic001G054900 Sobic001G054900 Sobic003G150000--Sobic001G054900 Sobic009G050300 Sobic009G050300 Sobic003G150000--Sobic009G050300 Sobic005G019700 Sobic005G019700 Sobic003G150000--Sobic005G019700 Sobic009G163800 Sobic009G163800 Sobic003G150000--Sobic009G163800 Sobic001G095300 Sobic001G095300 Sobic010G204600--Sobic001G095300 Sobic003G063200 Sobic003G063200 Sobic010G204600--Sobic003G063200 Sobic002G405600 Sobic002G405600 Sobic010G204600--Sobic002G405600 Sobic004G157000 Sobic004G157000 Sobic010G204600--Sobic004G157000 Sobic010G204600--Sobic009G023200 Sobic009G129000 Sobic009G129000 Sobic010G204600--Sobic009G129000 Sobic001G055600 Sobic001G055600 Sobic010G204600--Sobic001G055600 Sobic003G202200 Sobic003G202200 Sobic010G204600--Sobic003G202200 Sobic009G033700 Sobic009G033700 Sobic010G204600--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic008G185400--Sobic002G046100 Sobic008G185400--Sobic010G041600 Sobic008G185400--Sobic003G285800 Sobic006G143400 Sobic006G143400 Sobic008G185400--Sobic006G143400 Sobic008G185400--Sobic001G034700 Sobic004G272800 Sobic004G272800 Sobic008G185400--Sobic004G272800 Sobic002G187500 Sobic002G187500 Sobic008G185400--Sobic002G187500 Sobic002G190900 Sobic002G190900 Sobic008G185400--Sobic002G190900 Sobic001G281400 Sobic001G281400 Sobic008G185400--Sobic001G281400 Sobic003G341600 Sobic003G341600 Sobic003G367800--Sobic003G341600 Sobic003G367800--Sobic002G093000 Sobic003G367800--Sobic010G204600 Sobic003G367800--Sobic003G150000 Sobic003G306100 Sobic003G306100 Sobic003G367800--Sobic003G306100 Sobic003G025700 Sobic003G025700 Sobic003G367800--Sobic003G025700 Sobic003G367800--Sobic010G041600 Sobic003G254300 Sobic003G254300 Sobic003G367800--Sobic003G254300 Sobic004G330700 Sobic004G330700 Sobic003G367800--Sobic004G330700 Sobic004G187900 Sobic004G187900 Sobic009G023200--Sobic004G187900 Sobic009G023200--Sobic010G204600 Sobic009G023200--Sobic003G063200 Sobic009G023200--Sobic001G067601 Sobic009G023200--Sobic002G046100 Sobic002G245800 Sobic002G245800 Sobic009G023200--Sobic002G245800 Sobic003G181500 Sobic003G181500 Sobic009G023200--Sobic003G181500 Sobic009G023200--Sobic003G202200 Sobic005G196800 Sobic005G196800 Sobic009G023200--Sobic005G196800
Octagon: transcription factors


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