Gene annotation
Transcriptome id Sobic.002G099350.1
Synonym -
Functional annotation -
UniProt A0A1W0W359
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G390200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
2 Sobic.006G061900 AT hook motif domain containing protein, expressed -
3 Sobic.010G057633 - K13993: HSP20 family protein
4 Sobic.007G061100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transcription factor, putative, expressed K14431: transcription factor TGA
5 Sobic.001G284475 - -
6 Sobic.006G056800 - -
7 Sobic.004G131600 plasma membrane ATPase, putative, expressed -
8 Sobic.001G037300 - -
9 Sobic.003G032500 - -
10 Sobic.003G164950 - -
11 Sobic.001G062900 peptidase, putative, expressed K01301: N-acetylated-alpha-linked acidic dipeptidase
12 Sobic.001G236400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
13 Sobic.004G175400 - -
14 Sobic.005G221250 - -
15 Sobic.008G171000 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
16 Sobic.010G262500 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
17 Sobic.004G086150 - -
18 Sobic.008G088818 - -
19 Sobic.010G019000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
20 Sobic.004G325100 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)


Gene co-expression network
sample Sobic002G099350 Sobic002G099350 Sobic001G390200 Sobic001G390200 Sobic002G099350--Sobic001G390200 Sobic006G061900 Sobic006G061900 Sobic002G099350--Sobic006G061900 Sobic010G057633 Sobic010G057633 Sobic002G099350--Sobic010G057633 Sobic007G061100 Sobic007G061100 Sobic002G099350--Sobic007G061100 Sobic001G284475 Sobic001G284475 Sobic002G099350--Sobic001G284475 Sobic006G056800 Sobic006G056800 Sobic002G099350--Sobic006G056800 Sobic004G131600 Sobic004G131600 Sobic002G099350--Sobic004G131600 Sobic001G037300 Sobic001G037300 Sobic002G099350--Sobic001G037300 Sobic003G032500 Sobic003G032500 Sobic002G099350--Sobic003G032500 Sobic007G164000 Sobic007G164000 Sobic001G390200--Sobic007G164000 Sobic001G128300 Sobic001G128300 Sobic001G390200--Sobic001G128300 Sobic010G019000 Sobic010G019000 Sobic001G390200--Sobic010G019000 Sobic003G198800 Sobic003G198800 Sobic001G390200--Sobic003G198800 Sobic001G381600 Sobic001G381600 Sobic001G390200--Sobic001G381600 Sobic008G152600 Sobic008G152600 Sobic001G390200--Sobic008G152600 Sobic008G047400 Sobic008G047400 Sobic001G390200--Sobic008G047400 Sobic003G242000 Sobic003G242000 Sobic001G390200--Sobic003G242000 Sobic001G064200 Sobic001G064200 Sobic001G390200--Sobic001G064200 Sobic005G221250 Sobic005G221250 Sobic006G061900--Sobic005G221250 Sobic003G069875 Sobic003G069875 Sobic006G061900--Sobic003G069875 Sobic004G038800 Sobic004G038800 Sobic006G061900--Sobic004G038800 Sobic001G333300 Sobic001G333300 Sobic006G061900--Sobic001G333300 Sobic007G010700 Sobic007G010700 Sobic006G061900--Sobic007G010700 Sobic003G317500 Sobic003G317500 Sobic006G061900--Sobic003G317500 Sobic005G095660 Sobic005G095660 Sobic006G061900--Sobic005G095660 Sobic005G150350 Sobic005G150350 Sobic006G061900--Sobic005G150350 Sobic001G459600 Sobic001G459600 Sobic006G061900--Sobic001G459600 Sobic010G057633--Sobic007G010700 Sobic001G000501 Sobic001G000501 Sobic010G057633--Sobic001G000501 Sobic010G057633--Sobic005G095660 Sobic001G236700 Sobic001G236700 Sobic010G057633--Sobic001G236700 Sobic005G053200 Sobic005G053200 Sobic010G057633--Sobic005G053200 Sobic009G098200 Sobic009G098200 Sobic010G057633--Sobic009G098200 Sobic001G000700 Sobic001G000700 Sobic010G057633--Sobic001G000700 Sobic002G418800 Sobic002G418800 Sobic010G057633--Sobic002G418800 Sobic010G057633--Sobic001G459600 Sobic007G090403 Sobic007G090403 Sobic007G061100--Sobic007G090403 Sobic002G244200 Sobic002G244200 Sobic007G061100--Sobic002G244200 Sobic001G062900 Sobic001G062900 Sobic007G061100--Sobic001G062900 Sobic003G160100 Sobic003G160100 Sobic007G061100--Sobic003G160100 Sobic001G413000 Sobic001G413000 Sobic007G061100--Sobic001G413000 Sobic004G086150 Sobic004G086150 Sobic007G061100--Sobic004G086150 Sobic009G248801 Sobic009G248801 Sobic007G061100--Sobic009G248801 Sobic002G017500 Sobic002G017500 Sobic007G061100--Sobic002G017500 Sobic006G225900 Sobic006G225900 Sobic007G061100--Sobic006G225900 Sobic001G284475--Sobic006G056800 Sobic006G038951 Sobic006G038951 Sobic001G284475--Sobic006G038951 Sobic003G251400 Sobic003G251400 Sobic001G284475--Sobic003G251400 Sobic003G181201 Sobic003G181201 Sobic001G284475--Sobic003G181201 Sobic003G252400 Sobic003G252400 Sobic001G284475--Sobic003G252400 Sobic010G217532 Sobic010G217532 Sobic001G284475--Sobic010G217532 Sobic005G060600 Sobic005G060600 Sobic001G284475--Sobic005G060600 Sobic007G213100 Sobic007G213100 Sobic001G284475--Sobic007G213100 Sobic003G164950 Sobic003G164950 Sobic001G284475--Sobic003G164950 Sobic006G056800--Sobic001G284475 Sobic006G056800--Sobic005G060600 Sobic006G056800--Sobic003G181201 Sobic006G056800--Sobic003G252400 Sobic006G056800--Sobic003G164950 Sobic006G056800--Sobic003G251400 Sobic001G086500 Sobic001G086500 Sobic006G056800--Sobic001G086500 Sobic004G211301 Sobic004G211301 Sobic006G056800--Sobic004G211301 Sobic003G397500 Sobic003G397500 Sobic006G056800--Sobic003G397500 Sobic007G173100 Sobic007G173100 Sobic004G131600--Sobic007G173100 Sobic007G173150 Sobic007G173150 Sobic004G131600--Sobic007G173150 Sobic010G154600 Sobic010G154600 Sobic004G131600--Sobic010G154600 Sobic004G133900 Sobic004G133900 Sobic004G131600--Sobic004G133900 Sobic009G107800 Sobic009G107800 Sobic004G131600--Sobic009G107800 Sobic003G158900 Sobic003G158900 Sobic004G131600--Sobic003G158900 Sobic004G131600--Sobic002G099350 Sobic004G124900 Sobic004G124900 Sobic004G131600--Sobic004G124900 Sobic008G088818 Sobic008G088818 Sobic004G131600--Sobic008G088818 Sobic001G037200 Sobic001G037200 Sobic001G037300--Sobic001G037200 Sobic001G037300--Sobic007G061100 Sobic001G317300 Sobic001G317300 Sobic001G037300--Sobic001G317300 Sobic010G102800 Sobic010G102800 Sobic001G037300--Sobic010G102800 Sobic005G210200 Sobic005G210200 Sobic001G037300--Sobic005G210200 Sobic010G229450 Sobic010G229450 Sobic001G037300--Sobic010G229450 Sobic008G157100 Sobic008G157100 Sobic001G037300--Sobic008G157100 Sobic001G037300--Sobic002G099350 Sobic007G149700 Sobic007G149700 Sobic001G037300--Sobic007G149700 Sobic003G425500 Sobic003G425500 Sobic003G032500--Sobic003G425500 Sobic004G285700 Sobic004G285700 Sobic003G032500--Sobic004G285700 Sobic003G032500--Sobic002G099350 Sobic010G220400 Sobic010G220400 Sobic003G032500--Sobic010G220400 Sobic003G092800 Sobic003G092800 Sobic003G032500--Sobic003G092800 Sobic002G016200 Sobic002G016200 Sobic003G032500--Sobic002G016200 Sobic010G134700 Sobic010G134700 Sobic003G032500--Sobic010G134700 Sobic001G188400 Sobic001G188400 Sobic003G032500--Sobic001G188400 Sobic004G331000 Sobic004G331000 Sobic003G032500--Sobic004G331000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.