Gene annotation
Transcriptome id Sobic.003G032500.1
Synonym
Functional annotation -
UniProt A0A1B6Q129
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G425500 Calcium-binding protein(PubMedID : 24906815)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML10 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
2 Sobic.004G285700 expressed protein -
3 Sobic.002G099350 - -
4 Sobic.010G220400 -(PubMedID : 23108465)@OsFBX202 - F-box domain containing protein, expressed -
5 Sobic.003G092800 white-brown complex homolog protein 7, putative, expressed -
6 Sobic.002G016200 STE_MEKK_ste11_MAP3K.20 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.010G134700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidyl-prolyl isomerase, putative, expressed K09571: FK506-binding protein 4/5
8 Sobic.001G188400 tobamovirus multiplication protein, putative, expressed -
9 Sobic.004G331000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsPOP6 - Putative Prolyl Oligopeptidase homologue, expressed -
10 Sobic.007G032000 tryptophan synthase beta chain 1, putative, expressed K01696: tryptophan synthase beta chain
11 Sobic.002G368700 OsMADS18 - MADS-box family gene with MIKCc type-box, expressed -
12 Sobic.004G031200 - -
13 Sobic.008G041450 - -
14 Sobic.010G007300 hydrolase activity(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase activity(PubMedID : 24655390)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
15 Sobic.009G130900 "oxidoreductase, 2OG-Fe(II) oxygenase family protein"(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
16 Sobic.002G084800 expressed protein -
17 Sobic.009G116900 CW-type Zinc Finger, putative, expressed -
18 Sobic.009G026300 expressed protein K17815: exonuclease V
19 Sobic.004G302800 MSP domain containing protein, expressed -
20 Sobic.003G405600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic003G032500 Sobic003G032500 Sobic003G425500 Sobic003G425500 Sobic003G032500--Sobic003G425500 Sobic004G285700 Sobic004G285700 Sobic003G032500--Sobic004G285700 Sobic002G099350 Sobic002G099350 Sobic003G032500--Sobic002G099350 Sobic010G220400 Sobic010G220400 Sobic003G032500--Sobic010G220400 Sobic003G092800 Sobic003G092800 Sobic003G032500--Sobic003G092800 Sobic002G016200 Sobic002G016200 Sobic003G032500--Sobic002G016200 Sobic010G134700 Sobic010G134700 Sobic003G032500--Sobic010G134700 Sobic001G188400 Sobic001G188400 Sobic003G032500--Sobic001G188400 Sobic004G331000 Sobic004G331000 Sobic003G032500--Sobic004G331000 Sobic003G354900 Sobic003G354900 Sobic003G425500--Sobic003G354900 Sobic009G069300 Sobic009G069300 Sobic003G425500--Sobic009G069300 Sobic003G339700 Sobic003G339700 Sobic003G425500--Sobic003G339700 Sobic009G195800 Sobic009G195800 Sobic003G425500--Sobic009G195800 Sobic001G333600 Sobic001G333600 Sobic003G425500--Sobic001G333600 Sobic001G391300 Sobic001G391300 Sobic003G425500--Sobic001G391300 Sobic003G350800 Sobic003G350800 Sobic003G425500--Sobic003G350800 Sobic007G160200 Sobic007G160200 Sobic003G425500--Sobic007G160200 Sobic009G183101 Sobic009G183101 Sobic003G425500--Sobic009G183101 Sobic010G007300 Sobic010G007300 Sobic004G285700--Sobic010G007300 Sobic007G032000 Sobic007G032000 Sobic004G285700--Sobic007G032000 Sobic004G285700--Sobic001G188400 Sobic003G198900 Sobic003G198900 Sobic004G285700--Sobic003G198900 Sobic004G302800 Sobic004G302800 Sobic004G285700--Sobic004G302800 Sobic006G115100 Sobic006G115100 Sobic004G285700--Sobic006G115100 Sobic001G391200 Sobic001G391200 Sobic004G285700--Sobic001G391200 Sobic001G095000 Sobic001G095000 Sobic004G285700--Sobic001G095000 Sobic002G307800 Sobic002G307800 Sobic004G285700--Sobic002G307800 Sobic001G390200 Sobic001G390200 Sobic002G099350--Sobic001G390200 Sobic006G061900 Sobic006G061900 Sobic002G099350--Sobic006G061900 Sobic010G057633 Sobic010G057633 Sobic002G099350--Sobic010G057633 Sobic007G061100 Sobic007G061100 Sobic002G099350--Sobic007G061100 Sobic001G284475 Sobic001G284475 Sobic002G099350--Sobic001G284475 Sobic006G056800 Sobic006G056800 Sobic002G099350--Sobic006G056800 Sobic004G131600 Sobic004G131600 Sobic002G099350--Sobic004G131600 Sobic001G037300 Sobic001G037300 Sobic002G099350--Sobic001G037300 Sobic002G099350--Sobic003G032500 Sobic009G000700 Sobic009G000700 Sobic010G220400--Sobic009G000700 Sobic001G159850 Sobic001G159850 Sobic010G220400--Sobic001G159850 Sobic009G217400 Sobic009G217400 Sobic003G092800--Sobic009G217400 Sobic003G433400 Sobic003G433400 Sobic003G092800--Sobic003G433400 Sobic002G084800 Sobic002G084800 Sobic003G092800--Sobic002G084800 Sobic008G069300 Sobic008G069300 Sobic003G092800--Sobic008G069300 Sobic007G022600 Sobic007G022600 Sobic003G092800--Sobic007G022600 Sobic003G291800 Sobic003G291800 Sobic003G092800--Sobic003G291800 Sobic009G026300 Sobic009G026300 Sobic003G092800--Sobic009G026300 Sobic007G076400 Sobic007G076400 Sobic003G092800--Sobic007G076400 Sobic006G250800 Sobic006G250800 Sobic003G092800--Sobic006G250800 Sobic001G376200 Sobic001G376200 Sobic002G016200--Sobic001G376200 Sobic010G169900 Sobic010G169900 Sobic002G016200--Sobic010G169900 Sobic009G192300 Sobic009G192300 Sobic002G016200--Sobic009G192300 Sobic001G490900 Sobic001G490900 Sobic002G016200--Sobic001G490900 Sobic009G122500 Sobic009G122500 Sobic002G016200--Sobic009G122500 Sobic003G181700 Sobic003G181700 Sobic002G016200--Sobic003G181700 Sobic001G308400 Sobic001G308400 Sobic002G016200--Sobic001G308400 Sobic010G034100 Sobic010G034100 Sobic002G016200--Sobic010G034100 SobicK028600 SobicK028600 Sobic002G016200--SobicK028600 Sobic004G098800 Sobic004G098800 Sobic010G134700--Sobic004G098800 Sobic003G385000 Sobic003G385000 Sobic010G134700--Sobic003G385000 Sobic002G368100 Sobic002G368100 Sobic010G134700--Sobic002G368100 Sobic010G006800 Sobic010G006800 Sobic010G134700--Sobic010G006800 Sobic008G141600 Sobic008G141600 Sobic010G134700--Sobic008G141600 Sobic004G074900 Sobic004G074900 Sobic010G134700--Sobic004G074900 Sobic003G238250 Sobic003G238250 Sobic010G134700--Sobic003G238250 Sobic003G392275 Sobic003G392275 Sobic010G134700--Sobic003G392275 Sobic004G178700 Sobic004G178700 Sobic010G134700--Sobic004G178700 Sobic001G188400--Sobic006G115100 Sobic001G253300 Sobic001G253300 Sobic001G188400--Sobic001G253300 Sobic003G316200 Sobic003G316200 Sobic001G188400--Sobic003G316200 Sobic001G188400--Sobic006G250800 Sobic007G004300 Sobic007G004300 Sobic001G188400--Sobic007G004300 Sobic002G079000 Sobic002G079000 Sobic001G188400--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic001G188400--Sobic002G355800 Sobic001G188400--Sobic002G084800 Sobic008G055500 Sobic008G055500 Sobic001G188400--Sobic008G055500 Sobic006G116900 Sobic006G116900 Sobic004G331000--Sobic006G116900 Sobic004G263500 Sobic004G263500 Sobic004G331000--Sobic004G263500 Sobic005G048500 Sobic005G048500 Sobic004G331000--Sobic005G048500 Sobic004G331000--Sobic003G198900 Sobic004G331000--Sobic008G055500 Sobic009G116900 Sobic009G116900 Sobic004G331000--Sobic009G116900 Sobic001G257800 Sobic001G257800 Sobic004G331000--Sobic001G257800 Sobic004G004800 Sobic004G004800 Sobic004G331000--Sobic004G004800 Sobic004G331000--Sobic009G217400
Octagon: transcription factors


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