Gene annotation
Transcriptome id Sobic.004G285700.2,Sobic.004G285700.1,Sobic.004G285700.4,Sobic.004G285700.3
Synonym Sb04g032160
Functional annotation expressed protein
UniProt C5Y1B2
Pfam PF03478
Panther DB PTHR13710 PTHR13710:SF88
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33190 : F-box family protein with a domain of unknown function (DUF295)
RAP-DB (Rice) LOC_Os02g45000.1 : expressed protein
MaizeGDB (Corn) Zm00025a032276 , Zm00025a021471
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G285700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G007300 hydrolase activity(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase activity(PubMedID : 24655390)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
2 Sobic.007G032000 tryptophan synthase beta chain 1, putative, expressed K01696: tryptophan synthase beta chain
3 Sobic.001G188400 tobamovirus multiplication protein, putative, expressed -
4 Sobic.003G198900 protein phosphatase 2C, putative, expressed -
5 Sobic.004G302800 MSP domain containing protein, expressed -
6 Sobic.006G115100 expressed protein -
7 Sobic.001G391200 ABC transporter, ATP-binding protein, putative, expressed K12608: CCR4-NOT complex subunit CAF16
8 Sobic.001G095000 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
9 Sobic.002G307800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K01931: protein neuralized
10 Sobic.007G004300 phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed -
11 Sobic.005G145201 - K06630: 14-3-3 protein epsilon
12 Sobic.004G256700 ZAC, putative, expressed K12486: stromal membrane-associated protein
13 Sobic.002G047500 galactose-1-phosphate uridyl transferase, putative, expressed K00965: galT, UDPglucose--hexose-1-phosphate uridylyltransferase
14 Sobic.010G105000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
15 Sobic.009G209900 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
16 Sobic.004G213300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
17 Sobic.001G408400 phosphatase, putative, expressed K07252: dolichyldiphosphatase
18 Sobic.007G026800 actin, putative, expressed K18584: ACTR3, actin-related protein 3
19 Sobic.007G076400 expressed protein -
20 Sobic.001G511300 expressed protein -


Gene co-expression network
sample Sobic004G285700 Sobic004G285700 Sobic010G007300 Sobic010G007300 Sobic004G285700--Sobic010G007300 Sobic007G032000 Sobic007G032000 Sobic004G285700--Sobic007G032000 Sobic001G188400 Sobic001G188400 Sobic004G285700--Sobic001G188400 Sobic003G198900 Sobic003G198900 Sobic004G285700--Sobic003G198900 Sobic004G302800 Sobic004G302800 Sobic004G285700--Sobic004G302800 Sobic006G115100 Sobic006G115100 Sobic004G285700--Sobic006G115100 Sobic001G391200 Sobic001G391200 Sobic004G285700--Sobic001G391200 Sobic001G095000 Sobic001G095000 Sobic004G285700--Sobic001G095000 Sobic002G307800 Sobic002G307800 Sobic004G285700--Sobic002G307800 Sobic010G007300--Sobic004G285700 Sobic010G007300--Sobic002G307800 Sobic002G310900 Sobic002G310900 Sobic010G007300--Sobic002G310900 Sobic003G403300 Sobic003G403300 Sobic010G007300--Sobic003G403300 Sobic006G250800 Sobic006G250800 Sobic010G007300--Sobic006G250800 Sobic010G225801 Sobic010G225801 Sobic010G007300--Sobic010G225801 Sobic004G151800 Sobic004G151800 Sobic010G007300--Sobic004G151800 Sobic003G150500 Sobic003G150500 Sobic010G007300--Sobic003G150500 Sobic002G252300 Sobic002G252300 Sobic010G007300--Sobic002G252300 Sobic003G302300 Sobic003G302300 Sobic007G032000--Sobic003G302300 Sobic007G032000--Sobic001G095000 Sobic008G116700 Sobic008G116700 Sobic007G032000--Sobic008G116700 Sobic006G109100 Sobic006G109100 Sobic007G032000--Sobic006G109100 Sobic007G032000--Sobic004G302800 Sobic009G186700 Sobic009G186700 Sobic007G032000--Sobic009G186700 Sobic005G145201 Sobic005G145201 Sobic007G032000--Sobic005G145201 Sobic008G013200 Sobic008G013200 Sobic007G032000--Sobic008G013200 Sobic007G032000--Sobic003G198900 Sobic001G188400--Sobic006G115100 Sobic001G253300 Sobic001G253300 Sobic001G188400--Sobic001G253300 Sobic003G316200 Sobic003G316200 Sobic001G188400--Sobic003G316200 Sobic001G188400--Sobic006G250800 Sobic007G004300 Sobic007G004300 Sobic001G188400--Sobic007G004300 Sobic002G079000 Sobic002G079000 Sobic001G188400--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic001G188400--Sobic002G355800 Sobic002G084800 Sobic002G084800 Sobic001G188400--Sobic002G084800 Sobic008G055500 Sobic008G055500 Sobic001G188400--Sobic008G055500 Sobic003G250400 Sobic003G250400 Sobic003G198900--Sobic003G250400 Sobic003G198900--Sobic004G302800 Sobic006G270000 Sobic006G270000 Sobic003G198900--Sobic006G270000 Sobic001G257800 Sobic001G257800 Sobic003G198900--Sobic001G257800 Sobic003G024400 Sobic003G024400 Sobic003G198900--Sobic003G024400 Sobic002G074800 Sobic002G074800 Sobic003G198900--Sobic002G074800 Sobic001G257200 Sobic001G257200 Sobic003G198900--Sobic001G257200 Sobic008G069300 Sobic008G069300 Sobic003G198900--Sobic008G069300 Sobic004G213300 Sobic004G213300 Sobic003G198900--Sobic004G213300 Sobic004G302800--Sobic003G198900 Sobic004G302800--Sobic003G250400 Sobic001G475300 Sobic001G475300 Sobic004G302800--Sobic001G475300 Sobic004G302800--Sobic004G213300 Sobic004G302800--Sobic001G257800 Sobic003G402800 Sobic003G402800 Sobic004G302800--Sobic003G402800 Sobic003G405600 Sobic003G405600 Sobic004G302800--Sobic003G405600 Sobic004G302800--Sobic008G055500 Sobic001G141400 Sobic001G141400 Sobic004G302800--Sobic001G141400 Sobic006G115100--Sobic001G188400 Sobic006G115100--Sobic007G004300 Sobic006G115100--Sobic008G055500 Sobic002G200000 Sobic002G200000 Sobic006G115100--Sobic002G200000 Sobic004G176200 Sobic004G176200 Sobic006G115100--Sobic004G176200 Sobic006G115100--Sobic001G253300 Sobic002G198100 Sobic002G198100 Sobic006G115100--Sobic002G198100 Sobic007G076400 Sobic007G076400 Sobic006G115100--Sobic007G076400 Sobic009G026300 Sobic009G026300 Sobic006G115100--Sobic009G026300 Sobic007G171500 Sobic007G171500 Sobic001G391200--Sobic007G171500 Sobic004G297700 Sobic004G297700 Sobic001G391200--Sobic004G297700 Sobic003G380300 Sobic003G380300 Sobic001G391200--Sobic003G380300 Sobic004G256700 Sobic004G256700 Sobic001G391200--Sobic004G256700 Sobic010G032600 Sobic010G032600 Sobic001G391200--Sobic010G032600 Sobic001G387200 Sobic001G387200 Sobic001G391200--Sobic001G387200 Sobic001G518500 Sobic001G518500 Sobic001G391200--Sobic001G518500 Sobic003G129900 Sobic003G129900 Sobic001G391200--Sobic003G129900 Sobic003G308400 Sobic003G308400 Sobic001G391200--Sobic003G308400 Sobic003G202600 Sobic003G202600 Sobic001G095000--Sobic003G202600 Sobic007G087000 Sobic007G087000 Sobic001G095000--Sobic007G087000 Sobic001G237600 Sobic001G237600 Sobic001G095000--Sobic001G237600 Sobic001G095000--Sobic002G079000 Sobic001G095000--Sobic007G032000 Sobic003G302200 Sobic003G302200 Sobic001G095000--Sobic003G302200 Sobic001G095000--Sobic007G076400 Sobic001G095000--Sobic001G188400 Sobic001G095000--Sobic008G116700 Sobic009G217400 Sobic009G217400 Sobic002G307800--Sobic009G217400 Sobic002G307800--Sobic006G250800 Sobic002G307800--Sobic002G310900 Sobic002G307800--Sobic003G403300 Sobic003G010800 Sobic003G010800 Sobic002G307800--Sobic003G010800 Sobic002G307800--Sobic003G198900 Sobic002G307800--Sobic004G302800 Sobic002G307800--Sobic010G007300 Sobic003G433400 Sobic003G433400 Sobic002G307800--Sobic003G433400
Octagon: transcription factors


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