Gene annotation
Transcriptome id Sobic.002G104400.4,Sobic.002G104400.1,Sobic.002G104400.3,Sobic.002G104400.2
Synonym
Functional annotation WRKY123, expressed
UniProt A0A1W0W370 , A0A1B6QAD6 , A0A1W0W356 , A0A1W0W378
Pfam PF03106 PF00931
Panther DB PTHR23155 PTHR23155:SF516
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein,LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os07g17230.1 : WRKY123, expressed
MaizeGDB (Corn) Zm00025a045570
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G186200 pentatricopeptide, putative, expressed -
2 Sobic.001G455500 pentatricopeptide repeat domain containing protein, putative, expressed -
3 Sobic.005G127000 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
4 Sobic.001G388400 expressed protein -
5 Sobic.007G205600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
6 Sobic.003G310800 expressed protein -
7 Sobic.003G342200 dihydroflavonol-4-reductase, putative, expressed -
8 Sobic.004G248400 APO, putative, expressed -
9 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
10 Sobic.010G076800 ferredoxin thioredoxin reductase catalytic beta chain family protein(PubMedID : 26465154)@ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed K17892: ferredoxin-thioredoxin reductase catalytic chain
11 Sobic.006G214700 APO, putative, expressed -
12 Sobic.002G004000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3 domain containing protein, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
13 Sobic.007G076900 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
14 Sobic.009G052700 4Fe-4S binding domain containing protein, expressed -
15 Sobic.009G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@16S rRNA processing protein RimM containing protein, expressed -
16 Sobic.006G280800 expressed protein -
17 Sobic.001G450600 uncharacterized protein sll0194, putative, expressed K03118: sec-independent protein translocase protein TatC
18 Sobic.007G227600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
19 Sobic.009G253000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA polymerase sigma factor, putative, expressed -
20 Sobic.004G025400 phosphatidate cytidylyltransferase, putative, expressed -


Gene co-expression network
sample Sobic002G104400 Sobic002G104400 Sobic001G186200 Sobic001G186200 Sobic002G104400--Sobic001G186200 Sobic001G455500 Sobic001G455500 Sobic002G104400--Sobic001G455500 Sobic005G127000 Sobic005G127000 Sobic002G104400--Sobic005G127000 Sobic001G388400 Sobic001G388400 Sobic002G104400--Sobic001G388400 Sobic007G205600 Sobic007G205600 Sobic002G104400--Sobic007G205600 Sobic003G310800 Sobic003G310800 Sobic002G104400--Sobic003G310800 Sobic003G342200 Sobic003G342200 Sobic002G104400--Sobic003G342200 Sobic004G248400 Sobic004G248400 Sobic002G104400--Sobic004G248400 Sobic001G006000 Sobic001G006000 Sobic002G104400--Sobic001G006000 Sobic007G085800 Sobic007G085800 Sobic001G186200--Sobic007G085800 Sobic003G439000 Sobic003G439000 Sobic001G186200--Sobic003G439000 Sobic001G186200--Sobic001G455500 Sobic006G210400 Sobic006G210400 Sobic001G186200--Sobic006G210400 Sobic001G186200--Sobic003G342200 Sobic008G063200 Sobic008G063200 Sobic001G186200--Sobic008G063200 Sobic005G111500 Sobic005G111500 Sobic001G186200--Sobic005G111500 Sobic001G168800 Sobic001G168800 Sobic001G186200--Sobic001G168800 Sobic001G450600 Sobic001G450600 Sobic001G186200--Sobic001G450600 Sobic001G455500--Sobic003G439000 Sobic004G179200 Sobic004G179200 Sobic001G455500--Sobic004G179200 Sobic002G297400 Sobic002G297400 Sobic001G455500--Sobic002G297400 Sobic001G455500--Sobic001G186200 Sobic001G455500--Sobic001G006000 Sobic004G357300 Sobic004G357300 Sobic001G455500--Sobic004G357300 Sobic001G469900 Sobic001G469900 Sobic001G455500--Sobic001G469900 Sobic001G455500--Sobic006G210400 Sobic001G001300 Sobic001G001300 Sobic001G455500--Sobic001G001300 Sobic007G059500 Sobic007G059500 Sobic005G127000--Sobic007G059500 Sobic008G183200 Sobic008G183200 Sobic005G127000--Sobic008G183200 Sobic010G241300 Sobic010G241300 Sobic005G127000--Sobic010G241300 Sobic004G122200 Sobic004G122200 Sobic005G127000--Sobic004G122200 Sobic001G377500 Sobic001G377500 Sobic005G127000--Sobic001G377500 Sobic005G127000--Sobic001G186200 Sobic010G225600 Sobic010G225600 Sobic005G127000--Sobic010G225600 Sobic001G498300 Sobic001G498300 Sobic005G127000--Sobic001G498300 Sobic008G151000 Sobic008G151000 Sobic005G127000--Sobic008G151000 Sobic009G234200 Sobic009G234200 Sobic001G388400--Sobic009G234200 Sobic010G028000 Sobic010G028000 Sobic001G388400--Sobic010G028000 Sobic009G036300 Sobic009G036300 Sobic001G388400--Sobic009G036300 Sobic010G074200 Sobic010G074200 Sobic001G388400--Sobic010G074200 Sobic007G227600 Sobic007G227600 Sobic001G388400--Sobic007G227600 Sobic006G204100 Sobic006G204100 Sobic001G388400--Sobic006G204100 Sobic009G253000 Sobic009G253000 Sobic001G388400--Sobic009G253000 Sobic009G233800 Sobic009G233800 Sobic001G388400--Sobic009G233800 Sobic002G250100 Sobic002G250100 Sobic001G388400--Sobic002G250100 Sobic007G205600--Sobic001G388400 Sobic003G170200 Sobic003G170200 Sobic007G205600--Sobic003G170200 Sobic001G537700 Sobic001G537700 Sobic007G205600--Sobic001G537700 Sobic010G258300 Sobic010G258300 Sobic007G205600--Sobic010G258300 Sobic006G220600 Sobic006G220600 Sobic007G205600--Sobic006G220600 Sobic003G222600 Sobic003G222600 Sobic007G205600--Sobic003G222600 Sobic010G211500 Sobic010G211500 Sobic007G205600--Sobic010G211500 Sobic007G205600--Sobic001G450600 Sobic001G031300 Sobic001G031300 Sobic007G205600--Sobic001G031300 Sobic010G279100 Sobic010G279100 Sobic003G310800--Sobic010G279100 Sobic003G214800 Sobic003G214800 Sobic003G310800--Sobic003G214800 Sobic003G310800--Sobic001G186200 Sobic003G310800--Sobic001G006000 Sobic003G310800--Sobic001G455500 Sobic002G038300 Sobic002G038300 Sobic003G310800--Sobic002G038300 Sobic003G310800--Sobic010G028000 Sobic003G245800 Sobic003G245800 Sobic003G310800--Sobic003G245800 Sobic003G310800--Sobic001G388400 Sobic006G050400 Sobic006G050400 Sobic003G342200--Sobic006G050400 Sobic003G253300 Sobic003G253300 Sobic003G342200--Sobic003G253300 Sobic001G175700 Sobic001G175700 Sobic003G342200--Sobic001G175700 Sobic006G155500 Sobic006G155500 Sobic003G342200--Sobic006G155500 Sobic001G122300 Sobic001G122300 Sobic003G342200--Sobic001G122300 Sobic003G378600 Sobic003G378600 Sobic003G342200--Sobic003G378600 Sobic002G112400 Sobic002G112400 Sobic003G342200--Sobic002G112400 Sobic006G125000 Sobic006G125000 Sobic003G342200--Sobic006G125000 Sobic002G102200 Sobic002G102200 Sobic003G342200--Sobic002G102200 Sobic006G214700 Sobic006G214700 Sobic004G248400--Sobic006G214700 Sobic004G333400 Sobic004G333400 Sobic004G248400--Sobic004G333400 Sobic009G052700 Sobic009G052700 Sobic004G248400--Sobic009G052700 Sobic002G168300 Sobic002G168300 Sobic004G248400--Sobic002G168300 Sobic004G248400--Sobic001G450600 Sobic003G334100 Sobic003G334100 Sobic004G248400--Sobic003G334100 Sobic003G179400 Sobic003G179400 Sobic004G248400--Sobic003G179400 Sobic004G248400--Sobic008G063200 Sobic010G110332 Sobic010G110332 Sobic004G248400--Sobic010G110332 Sobic010G076800 Sobic010G076800 Sobic001G006000--Sobic010G076800 Sobic009G028400 Sobic009G028400 Sobic001G006000--Sobic009G028400 Sobic004G253400 Sobic004G253400 Sobic001G006000--Sobic004G253400 Sobic001G006000--Sobic008G063200 Sobic007G076900 Sobic007G076900 Sobic001G006000--Sobic007G076900 Sobic001G006000--Sobic004G179200 Sobic001G339100 Sobic001G339100 Sobic001G006000--Sobic001G339100 Sobic001G006000--Sobic003G253300 Sobic001G006000--Sobic003G245800
Octagon: transcription factors


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