Gene annotation
Transcriptome id Sobic.002G120100.1
Synonym
Functional annotation OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed
UniProt A0A1B6QAP6
Pfam -
Panther DB PTHR11731 PTHR11731:SF126
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G36210 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g11190.1 : OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a049546
Brachypodium PNT77602 , KQK22191
Barley -
Wheat TraesCS4B02G384400 , TraesCS4B02G384400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G136900 - -
2 Sobic.002G146900 - -
3 Sobic.002G123200 DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed K03009: RPB12, DNA-directed RNA polymerases I, II, and III subunit RPABC4
4 Sobic.004G260400 expressed protein K07018: uncharacterized protein
5 Sobic.001G039800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.006G008900 TKL_IRAK_CrRLK1L-1.10 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
7 Sobic.006G207500 expressed protein -
8 Sobic.007G079700 pentatricopeptide, putative, expressed -
9 Sobic.001G418800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
10 Sobic.010G066300 OsRCI2-8 - Putative low temperature and salt responsive protein, expressed -
11 Sobic.001G218800 expressed protein -
12 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
13 Sobic.009G252800 expressed protein -
14 Sobic.001G544100 peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed -
15 Sobic.002G188350 - -
16 Sobic.007G136700 YGL010w, putative, expressed -
17 Sobic.004G181500 DNA repair protein Rad51, putative, expressed K10880: DNA-repair protein XRCC3
18 Sobic.009G150700 expressed protein -
19 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
20 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -


Gene co-expression network
sample Sobic002G120100 Sobic002G120100 Sobic002G136900 Sobic002G136900 Sobic002G120100--Sobic002G136900 Sobic002G146900 Sobic002G146900 Sobic002G120100--Sobic002G146900 Sobic002G123200 Sobic002G123200 Sobic002G120100--Sobic002G123200 Sobic004G260400 Sobic004G260400 Sobic002G120100--Sobic004G260400 Sobic001G039800 Sobic001G039800 Sobic002G120100--Sobic001G039800 Sobic006G008900 Sobic006G008900 Sobic002G120100--Sobic006G008900 Sobic006G207500 Sobic006G207500 Sobic002G120100--Sobic006G207500 Sobic007G079700 Sobic007G079700 Sobic002G120100--Sobic007G079700 Sobic001G418800 Sobic001G418800 Sobic002G120100--Sobic001G418800 Sobic007G112700 Sobic007G112700 Sobic002G136900--Sobic007G112700 Sobic010G268200 Sobic010G268200 Sobic002G136900--Sobic010G268200 Sobic002G095900 Sobic002G095900 Sobic002G136900--Sobic002G095900 Sobic002G212800 Sobic002G212800 Sobic002G136900--Sobic002G212800 Sobic003G159450 Sobic003G159450 Sobic002G136900--Sobic003G159450 Sobic009G029500 Sobic009G029500 Sobic002G136900--Sobic009G029500 Sobic003G368800 Sobic003G368800 Sobic002G136900--Sobic003G368800 Sobic009G103500 Sobic009G103500 Sobic002G136900--Sobic009G103500 Sobic008G068601 Sobic008G068601 Sobic002G136900--Sobic008G068601 Sobic002G107532 Sobic002G107532 Sobic002G146900--Sobic002G107532 Sobic002G146900--Sobic007G112700 Sobic002G146900--Sobic002G136900 Sobic002G182150 Sobic002G182150 Sobic002G146900--Sobic002G182150 Sobic005G099200 Sobic005G099200 Sobic002G146900--Sobic005G099200 Sobic006G225800 Sobic006G225800 Sobic002G146900--Sobic006G225800 Sobic007G100100 Sobic007G100100 Sobic002G146900--Sobic007G100100 Sobic002G175900 Sobic002G175900 Sobic002G146900--Sobic002G175900 Sobic008G109100 Sobic008G109100 Sobic002G146900--Sobic008G109100 Sobic009G199700 Sobic009G199700 Sobic002G123200--Sobic009G199700 Sobic002G123200--Sobic007G079700 Sobic001G136900 Sobic001G136900 Sobic002G123200--Sobic001G136900 Sobic002G204000 Sobic002G204000 Sobic002G123200--Sobic002G204000 Sobic002G117200 Sobic002G117200 Sobic002G123200--Sobic002G117200 Sobic004G186000 Sobic004G186000 Sobic002G123200--Sobic004G186000 Sobic008G128600 Sobic008G128600 Sobic002G123200--Sobic008G128600 Sobic007G126200 Sobic007G126200 Sobic002G123200--Sobic007G126200 Sobic003G250500 Sobic003G250500 Sobic002G123200--Sobic003G250500 Sobic001G038100 Sobic001G038100 Sobic004G260400--Sobic001G038100 Sobic001G009800 Sobic001G009800 Sobic004G260400--Sobic001G009800 Sobic006G183000 Sobic006G183000 Sobic004G260400--Sobic006G183000 Sobic004G260400--Sobic004G186000 Sobic001G309100 Sobic001G309100 Sobic004G260400--Sobic001G309100 Sobic001G544100 Sobic001G544100 Sobic004G260400--Sobic001G544100 Sobic003G405700 Sobic003G405700 Sobic004G260400--Sobic003G405700 Sobic003G045400 Sobic003G045400 Sobic004G260400--Sobic003G045400 Sobic004G260400--Sobic002G204000 Sobic007G168200 Sobic007G168200 Sobic001G039800--Sobic007G168200 Sobic003G138600 Sobic003G138600 Sobic001G039800--Sobic003G138600 Sobic002G242200 Sobic002G242200 Sobic001G039800--Sobic002G242200 Sobic009G190800 Sobic009G190800 Sobic001G039800--Sobic009G190800 Sobic006G269000 Sobic006G269000 Sobic001G039800--Sobic006G269000 Sobic004G060600 Sobic004G060600 Sobic001G039800--Sobic004G060600 Sobic010G108900 Sobic010G108900 Sobic001G039800--Sobic010G108900 Sobic001G294200 Sobic001G294200 Sobic001G039800--Sobic001G294200 Sobic001G218800 Sobic001G218800 Sobic001G039800--Sobic001G218800 Sobic009G131100 Sobic009G131100 Sobic006G008900--Sobic009G131100 Sobic004G217600 Sobic004G217600 Sobic006G008900--Sobic004G217600 Sobic006G281200 Sobic006G281200 Sobic006G008900--Sobic006G281200 Sobic001G130400 Sobic001G130400 Sobic006G008900--Sobic001G130400 Sobic001G536500 Sobic001G536500 Sobic006G008900--Sobic001G536500 Sobic005G036000 Sobic005G036000 Sobic006G008900--Sobic005G036000 Sobic003G265400 Sobic003G265400 Sobic006G008900--Sobic003G265400 Sobic005G206700 Sobic005G206700 Sobic006G008900--Sobic005G206700 Sobic003G073900 Sobic003G073900 Sobic006G008900--Sobic003G073900 Sobic010G267500 Sobic010G267500 Sobic006G207500--Sobic010G267500 Sobic010G065400 Sobic010G065400 Sobic006G207500--Sobic010G065400 Sobic009G031200 Sobic009G031200 Sobic006G207500--Sobic009G031200 Sobic006G207500--Sobic006G183000 Sobic006G222400 Sobic006G222400 Sobic006G207500--Sobic006G222400 Sobic007G097900 Sobic007G097900 Sobic006G207500--Sobic007G097900 Sobic003G052400 Sobic003G052400 Sobic006G207500--Sobic003G052400 Sobic001G061700 Sobic001G061700 Sobic006G207500--Sobic001G061700 Sobic008G137600 Sobic008G137600 Sobic006G207500--Sobic008G137600 Sobic009G114800 Sobic009G114800 Sobic007G079700--Sobic009G114800 Sobic006G054500 Sobic006G054500 Sobic007G079700--Sobic006G054500 Sobic006G262900 Sobic006G262900 Sobic007G079700--Sobic006G262900 Sobic002G273900 Sobic002G273900 Sobic007G079700--Sobic002G273900 Sobic007G079700--Sobic009G199700 Sobic003G116700 Sobic003G116700 Sobic007G079700--Sobic003G116700 Sobic004G301900 Sobic004G301900 Sobic007G079700--Sobic004G301900 Sobic004G253000 Sobic004G253000 Sobic007G079700--Sobic004G253000 Sobic004G272300 Sobic004G272300 Sobic007G079700--Sobic004G272300 Sobic001G380500 Sobic001G380500 Sobic001G418800--Sobic001G380500 Sobic001G418800--Sobic001G218800 Sobic002G174900 Sobic002G174900 Sobic001G418800--Sobic002G174900 Sobic006G028300 Sobic006G028300 Sobic001G418800--Sobic006G028300 Sobic001G418800--Sobic010G108900 Sobic001G151900 Sobic001G151900 Sobic001G418800--Sobic001G151900 Sobic001G222900 Sobic001G222900 Sobic001G418800--Sobic001G222900 Sobic003G004700 Sobic003G004700 Sobic001G418800--Sobic003G004700 Sobic002G339500 Sobic002G339500 Sobic001G418800--Sobic002G339500
Octagon: transcription factors


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