Gene annotation
Transcriptome id Sobic.006G008900.2,Sobic.006G008900.1,Sobic.006G008900.3,Sobic.006G008900.4
Synonym HERK1
Functional annotation TKL_IRAK_CrRLK1L-1.10 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
UniProt A0A1B6PJD7
Pfam PF07714
Panther DB PTHR27003 PTHR27003:SF89 PTHR27003:SF89 PTHR27003
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0004672protein kinase activity GO:0006468protein phosphorylation


Orthologs (automatic annotation)
TAIR AT3G46290 : hercules receptor kinase 1
RAP-DB (Rice) LOC_Os05g06990.1 : TKL_IRAK_CrRLK1L-1.10 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
MaizeGDB (Corn) -
Brachypodium KQK07346
Barley -
Wheat TraesCS1B02G130300 , TraesCS1D02G110900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
2 Sobic.004G217600 expressed protein -
3 Sobic.006G281200 csAtPR5, putative, expressed -
4 Sobic.001G130400 expressed protein -
5 Sobic.001G536500 expressed protein -
6 Sobic.005G036000 POEI17 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
7 Sobic.003G265400 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase
8 Sobic.005G206700 WD domain, G-beta repeat domain containing protein, expressed K12602: WDR61, REC14, WD repeat-containing protein 61
9 Sobic.003G073900 expressed protein -
10 Sobic.001G128400 peptidase, T1 family, putative, expressed K02734: 20S proteasome subunit beta 4
11 Sobic.003G341600 prenylated rab acceptor, putative, expressed -
12 Sobic.005G127100 expressed protein -
13 Sobic.004G212500 expressed protein K00550: phosphatidyl-N-methylethanolamine N-methyltransferase
14 Sobic.008G111400 membrane protein, putative, expressed -
15 Sobic.003G254800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA5 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
16 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
17 Sobic.003G262100 expressed protein -
18 Sobic.009G236800 DUF1645 domain containing protein, putative, expressed -
19 Sobic.001G428100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
20 Sobic.010G171501 - -


Gene co-expression network
sample Sobic006G008900 Sobic006G008900 Sobic009G131100 Sobic009G131100 Sobic006G008900--Sobic009G131100 Sobic004G217600 Sobic004G217600 Sobic006G008900--Sobic004G217600 Sobic006G281200 Sobic006G281200 Sobic006G008900--Sobic006G281200 Sobic001G130400 Sobic001G130400 Sobic006G008900--Sobic001G130400 Sobic001G536500 Sobic001G536500 Sobic006G008900--Sobic001G536500 Sobic005G036000 Sobic005G036000 Sobic006G008900--Sobic005G036000 Sobic003G265400 Sobic003G265400 Sobic006G008900--Sobic003G265400 Sobic005G206700 Sobic005G206700 Sobic006G008900--Sobic005G206700 Sobic003G073900 Sobic003G073900 Sobic006G008900--Sobic003G073900 Sobic009G131100--Sobic001G536500 Sobic002G078400 Sobic002G078400 Sobic009G131100--Sobic002G078400 Sobic004G060600 Sobic004G060600 Sobic009G131100--Sobic004G060600 Sobic007G091000 Sobic007G091000 Sobic009G131100--Sobic007G091000 Sobic010G194900 Sobic010G194900 Sobic009G131100--Sobic010G194900 Sobic003G277000 Sobic003G277000 Sobic009G131100--Sobic003G277000 Sobic001G087900 Sobic001G087900 Sobic009G131100--Sobic001G087900 Sobic004G265700 Sobic004G265700 Sobic009G131100--Sobic004G265700 Sobic009G131100--Sobic006G281200 Sobic004G217600--Sobic009G131100 Sobic004G217600--Sobic006G281200 Sobic004G217600--Sobic003G265400 Sobic010G216200 Sobic010G216200 Sobic004G217600--Sobic010G216200 Sobic004G217600--Sobic004G060600 Sobic003G369500 Sobic003G369500 Sobic004G217600--Sobic003G369500 Sobic001G447900 Sobic001G447900 Sobic004G217600--Sobic001G447900 Sobic005G127100 Sobic005G127100 Sobic004G217600--Sobic005G127100 Sobic004G217600--Sobic003G277000 Sobic001G428100 Sobic001G428100 Sobic006G281200--Sobic001G428100 Sobic003G003000 Sobic003G003000 Sobic006G281200--Sobic003G003000 Sobic001G025600 Sobic001G025600 Sobic006G281200--Sobic001G025600 Sobic006G281200--Sobic009G131100 Sobic006G281200--Sobic007G091000 Sobic001G404100 Sobic001G404100 Sobic006G281200--Sobic001G404100 Sobic008G100000 Sobic008G100000 Sobic006G281200--Sobic008G100000 Sobic003G367900 Sobic003G367900 Sobic006G281200--Sobic003G367900 Sobic009G130400 Sobic009G130400 Sobic006G281200--Sobic009G130400 Sobic004G063500 Sobic004G063500 Sobic001G130400--Sobic004G063500 Sobic009G120100 Sobic009G120100 Sobic001G130400--Sobic009G120100 Sobic004G137900 Sobic004G137900 Sobic001G130400--Sobic004G137900 Sobic001G066700 Sobic001G066700 Sobic001G130400--Sobic001G066700 Sobic003G358300 Sobic003G358300 Sobic001G130400--Sobic003G358300 Sobic005G111100 Sobic005G111100 Sobic001G130400--Sobic005G111100 Sobic009G070200 Sobic009G070200 Sobic001G130400--Sobic009G070200 Sobic003G325700 Sobic003G325700 Sobic001G130400--Sobic003G325700 Sobic001G434400 Sobic001G434400 Sobic001G130400--Sobic001G434400 Sobic010G204600 Sobic010G204600 Sobic001G536500--Sobic010G204600 Sobic003G063200 Sobic003G063200 Sobic001G536500--Sobic003G063200 Sobic004G186500 Sobic004G186500 Sobic001G536500--Sobic004G186500 Sobic001G445800 Sobic001G445800 Sobic001G536500--Sobic001G445800 Sobic001G019900 Sobic001G019900 Sobic001G536500--Sobic001G019900 Sobic001G536500--Sobic009G131100 Sobic001G390300 Sobic001G390300 Sobic001G536500--Sobic001G390300 Sobic001G037000 Sobic001G037000 Sobic001G536500--Sobic001G037000 Sobic010G054200 Sobic010G054200 Sobic001G536500--Sobic010G054200 Sobic009G025900 Sobic009G025900 Sobic005G036000--Sobic009G025900 Sobic001G182600 Sobic001G182600 Sobic005G036000--Sobic001G182600 Sobic001G093900 Sobic001G093900 Sobic005G036000--Sobic001G093900 Sobic005G036000--Sobic009G131100 Sobic004G179600 Sobic004G179600 Sobic005G036000--Sobic004G179600 Sobic005G161100 Sobic005G161100 Sobic005G036000--Sobic005G161100 Sobic004G179700 Sobic004G179700 Sobic005G036000--Sobic004G179700 Sobic003G013600 Sobic003G013600 Sobic005G036000--Sobic003G013600 Sobic001G530350 Sobic001G530350 Sobic005G036000--Sobic001G530350 Sobic003G265400--Sobic004G217600 Sobic003G265400--Sobic003G369500 Sobic003G265400--Sobic009G131100 Sobic001G193200 Sobic001G193200 Sobic003G265400--Sobic001G193200 Sobic005G168700 Sobic005G168700 Sobic003G265400--Sobic005G168700 Sobic001G131400 Sobic001G131400 Sobic003G265400--Sobic001G131400 Sobic003G265400--Sobic006G281200 Sobic003G291400 Sobic003G291400 Sobic003G265400--Sobic003G291400 Sobic006G206700 Sobic006G206700 Sobic003G265400--Sobic006G206700 Sobic006G231700 Sobic006G231700 Sobic005G206700--Sobic006G231700 Sobic006G013900 Sobic006G013900 Sobic005G206700--Sobic006G013900 Sobic005G206700--Sobic004G137900 Sobic005G206700--Sobic010G054200 Sobic005G206700--Sobic004G063500 Sobic001G233800 Sobic001G233800 Sobic005G206700--Sobic001G233800 Sobic007G152400 Sobic007G152400 Sobic005G206700--Sobic007G152400 Sobic005G206700--Sobic009G120100 Sobic002G331300 Sobic002G331300 Sobic005G206700--Sobic002G331300 Sobic006G115000 Sobic006G115000 Sobic003G073900--Sobic006G115000 Sobic003G018600 Sobic003G018600 Sobic003G073900--Sobic003G018600 Sobic003G073900--Sobic010G054200 Sobic002G286900 Sobic002G286900 Sobic003G073900--Sobic002G286900 Sobic005G110800 Sobic005G110800 Sobic003G073900--Sobic005G110800 Sobic003G150000 Sobic003G150000 Sobic003G073900--Sobic003G150000 Sobic001G226500 Sobic001G226500 Sobic003G073900--Sobic001G226500 Sobic003G249700 Sobic003G249700 Sobic003G073900--Sobic003G249700 Sobic001G225700 Sobic001G225700 Sobic003G073900--Sobic001G225700
Octagon: transcription factors


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