Gene annotation
Transcriptome id Sobic.002G123900.1,Sobic.002G123900.2
Synonym
Functional annotation OsFBX187 - F-box domain containing protein, expressed
UniProt A0A1B6QAW1 , A0A1B6QAV9
Pfam PF00646 PF08387 PF00646
Panther DB PTHR31639 PTHR31639:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G13570 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os06g06600.1 : OsFBX187 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G103700 - -
2 Sobic.006G164000 expressed protein -
3 Sobic.004G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
4 Sobic.003G320900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G031200 translation initiation factor SUI1, putative, expressed -
6 Sobic.005G084900 OsDegp12 - Putative Deg protease homologue, expressed -
7 Sobic.003G436500 ubiquitin-fold modifier 1 precursor, putative, expressed K12162: ubiquitin-fold modifier 1
8 Sobic.005G180800 thioredoxin domain-containing protein 9, putative, expressed -
9 Sobic.002G400400 choline transporter-related, putative, expressed -
10 Sobic.003G033700 expressed protein K15326: tRNA-splicing endonuclease subunit Sen54
11 Sobic.001G206300 dof zinc finger domain containing protein, putative, expressed -
12 Sobic.010G050900 harpin-induced protein, putative, expressed -
13 Sobic.003G227200 mitochondrial import receptor subunit TOM7-1, putative, expressed K17771: mitochondrial import receptor subunit TOM7
14 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
15 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
16 Sobic.002G270700 OsRhmbd16 - Putative Rhomboid homologue, expressed -
17 Sobic.006G099800 signal recognition particle 19 kDa protein, putative, expressed K03105: signal recognition particle subunit SRP19
18 Sobic.006G096300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
19 Sobic.007G140200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Homologous to wheat temperature-induced ipocalin (TaTIL-1)(PubMedID : 16306142)@OsTIL-2 Temperature-induced lipocalin-2, expressed K03098: apolipoprotein D and lipocalin family protein
20 Sobic.005G044100 harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic002G123900 Sobic002G123900 Sobic002G103700 Sobic002G103700 Sobic002G123900--Sobic002G103700 Sobic006G164000 Sobic006G164000 Sobic002G123900--Sobic006G164000 Sobic004G250900 Sobic004G250900 Sobic002G123900--Sobic004G250900 Sobic003G320900 Sobic003G320900 Sobic002G123900--Sobic003G320900 Sobic003G031200 Sobic003G031200 Sobic002G123900--Sobic003G031200 Sobic005G084900 Sobic005G084900 Sobic002G123900--Sobic005G084900 Sobic003G436500 Sobic003G436500 Sobic002G123900--Sobic003G436500 Sobic005G180800 Sobic005G180800 Sobic002G123900--Sobic005G180800 Sobic002G400400 Sobic002G400400 Sobic002G123900--Sobic002G400400 Sobic002G103700--Sobic002G400400 Sobic002G103700--Sobic005G180800 Sobic003G022200 Sobic003G022200 Sobic002G103700--Sobic003G022200 Sobic005G032400 Sobic005G032400 Sobic002G103700--Sobic005G032400 Sobic003G415100 Sobic003G415100 Sobic002G103700--Sobic003G415100 Sobic001G218200 Sobic001G218200 Sobic002G103700--Sobic001G218200 Sobic007G078300 Sobic007G078300 Sobic002G103700--Sobic007G078300 Sobic001G129500 Sobic001G129500 Sobic002G103700--Sobic001G129500 Sobic007G155900 Sobic007G155900 Sobic002G103700--Sobic007G155900 Sobic003G358200 Sobic003G358200 Sobic006G164000--Sobic003G358200 Sobic004G155300 Sobic004G155300 Sobic006G164000--Sobic004G155300 Sobic006G164000--Sobic005G084900 Sobic001G419700 Sobic001G419700 Sobic006G164000--Sobic001G419700 Sobic002G420800 Sobic002G420800 Sobic006G164000--Sobic002G420800 Sobic003G159500 Sobic003G159500 Sobic006G164000--Sobic003G159500 Sobic004G345100 Sobic004G345100 Sobic006G164000--Sobic004G345100 Sobic006G164000--Sobic002G400400 Sobic001G170500 Sobic001G170500 Sobic006G164000--Sobic001G170500 Sobic004G028800 Sobic004G028800 Sobic004G250900--Sobic004G028800 Sobic001G488200 Sobic001G488200 Sobic004G250900--Sobic001G488200 Sobic007G097700 Sobic007G097700 Sobic004G250900--Sobic007G097700 Sobic004G250900--Sobic004G345100 Sobic002G276900 Sobic002G276900 Sobic004G250900--Sobic002G276900 Sobic004G256200 Sobic004G256200 Sobic004G250900--Sobic004G256200 Sobic006G096300 Sobic006G096300 Sobic004G250900--Sobic006G096300 Sobic009G025100 Sobic009G025100 Sobic004G250900--Sobic009G025100 Sobic009G009800 Sobic009G009800 Sobic004G250900--Sobic009G009800 Sobic002G270700 Sobic002G270700 Sobic003G320900--Sobic002G270700 Sobic003G320900--Sobic003G031200 Sobic003G320900--Sobic006G096300 Sobic003G320900--Sobic002G123900 Sobic008G058700 Sobic008G058700 Sobic003G320900--Sobic008G058700 Sobic002G121000 Sobic002G121000 Sobic003G320900--Sobic002G121000 Sobic003G126800 Sobic003G126800 Sobic003G320900--Sobic003G126800 Sobic009G160200 Sobic009G160200 Sobic003G320900--Sobic009G160200 Sobic003G189700 Sobic003G189700 Sobic003G320900--Sobic003G189700 Sobic010G088300 Sobic010G088300 Sobic003G031200--Sobic010G088300 Sobic004G242100 Sobic004G242100 Sobic003G031200--Sobic004G242100 Sobic002G359900 Sobic002G359900 Sobic003G031200--Sobic002G359900 Sobic008G111700 Sobic008G111700 Sobic003G031200--Sobic008G111700 Sobic002G129200 Sobic002G129200 Sobic003G031200--Sobic002G129200 Sobic002G044000 Sobic002G044000 Sobic003G031200--Sobic002G044000 Sobic003G043400 Sobic003G043400 Sobic003G031200--Sobic003G043400 Sobic001G402600 Sobic001G402600 Sobic003G031200--Sobic001G402600 Sobic001G285300 Sobic001G285300 Sobic003G031200--Sobic001G285300 Sobic009G002000 Sobic009G002000 Sobic005G084900--Sobic009G002000 Sobic009G030400 Sobic009G030400 Sobic005G084900--Sobic009G030400 Sobic005G084900--Sobic006G164000 Sobic002G280900 Sobic002G280900 Sobic005G084900--Sobic002G280900 Sobic001G067000 Sobic001G067000 Sobic005G084900--Sobic001G067000 Sobic001G294600 Sobic001G294600 Sobic005G084900--Sobic001G294600 Sobic010G059700 Sobic010G059700 Sobic005G084900--Sobic010G059700 Sobic004G145600 Sobic004G145600 Sobic005G084900--Sobic004G145600 Sobic010G141600 Sobic010G141600 Sobic005G084900--Sobic010G141600 Sobic003G436500--Sobic002G359900 Sobic003G436500--Sobic003G031200 Sobic003G436500--Sobic002G400400 Sobic001G147100 Sobic001G147100 Sobic003G436500--Sobic001G147100 Sobic005G187500 Sobic005G187500 Sobic003G436500--Sobic005G187500 Sobic010G253100 Sobic010G253100 Sobic003G436500--Sobic010G253100 Sobic003G436500--Sobic004G028800 Sobic008G160500 Sobic008G160500 Sobic003G436500--Sobic008G160500 Sobic003G436500--Sobic002G129200 Sobic005G180800--Sobic003G415100 Sobic005G180800--Sobic002G103700 Sobic005G180800--Sobic001G218200 Sobic006G261100 Sobic006G261100 Sobic005G180800--Sobic006G261100 Sobic009G166200 Sobic009G166200 Sobic005G180800--Sobic009G166200 Sobic004G313300 Sobic004G313300 Sobic005G180800--Sobic004G313300 Sobic001G384600 Sobic001G384600 Sobic005G180800--Sobic001G384600 Sobic005G180800--Sobic005G032400 Sobic002G247200 Sobic002G247200 Sobic005G180800--Sobic002G247200 Sobic001G033400 Sobic001G033400 Sobic002G400400--Sobic001G033400 Sobic002G400400--Sobic002G103700 Sobic002G400400--Sobic003G436500 Sobic002G400400--Sobic008G160500 Sobic001G310700 Sobic001G310700 Sobic002G400400--Sobic001G310700 Sobic002G400400--Sobic003G159500 Sobic007G050300 Sobic007G050300 Sobic002G400400--Sobic007G050300 Sobic010G207400 Sobic010G207400 Sobic002G400400--Sobic010G207400 Sobic001G039500 Sobic001G039500 Sobic002G400400--Sobic001G039500
Octagon: transcription factors


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