Gene annotation
Transcriptome id Sobic.002G125300.1
Synonym PIP2;6, Sb02g010800, SbPIP2;6;plasma membrane intrinsic protein/aquaporin, PIP2, PIP2B, 2, PIP aquaporin
Functional annotation up-regulated by silicon application (PubMedID : 24879770)
Up-regulated by osmotic stress. (PubMedID : 24879770)
aquaporin protein, putative, expressed
UniProt C5X552
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF137
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09872; aquaporin PIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G37170 : plasma membrane intrinsic protein 2
RAP-DB (Rice) LOC_Os07g26630.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a021083 , Zm00025a021439 , Zm00025a045837 , Zm00025a032250 , Zm00025a049510 , Zm00025a032042 , Zm00025a010237 , Zm00025a049307 , Zm00025a032750 , Zm00025a010642 , Zm00025a013555 , Zm00025a013554 , Zm00025a017913
Brachypodium KQJ84016 , KQJ83644 , KQK00428 , KQK16443 , KQK16441
Barley HORVU2Hr1G089820.5 , HORVU2Hr1G089820.4 , HORVU2Hr1G089820.7 , HORVU2Hr1G089820.6 , HORVU2Hr1G089820.1 , HORVU2Hr1G089820.3 , HORVU2Hr1G089820.2 , HORVU5Hr1G029550.1 , HORVU5Hr1G029550.2 , HORVU5Hr1G029550.3 , HORVU5Hr1G029550.4 , HORVU5Hr1G029550.5 , HORVU5Hr1G029550.6 , HORVU5Hr1G029550.7 , HORVU2Hr1G010990.4 , HORVU2Hr1G010990.3 , HORVU2Hr1G010990.2 , HORVU2Hr1G010990.1 , HORVU6Hr1G092960.12 , HORVU6Hr1G092960.13 , HORVU6Hr1G092960.10 , HORVU6Hr1G058930.9 , HORVU6Hr1G058930.8 , HORVU6Hr1G058930.4 , HORVU6Hr1G058930.1 , HORVU0Hr1G011280.6 , HORVU0Hr1G011280.4 , HORVU0Hr1G011280.5 , HORVU0Hr1G011280.2 , HORVU0Hr1G011280.3 , HORVU0Hr1G011280.1 , HORVU2Hr1G089940.14 , HORVU2Hr1G089940.15 , HORVU2Hr1G089940.16 , HORVU2Hr1G089940.17 , HORVU2Hr1G089940.10 , HORVU2Hr1G089940.11 , HORVU2Hr1G089940.12 , HORVU2Hr1G089940.13 , HORVU5Hr1G027240.4 , HORVU5Hr1G027240.5 , HORVU5Hr1G027240.2 , HORVU5Hr1G027240.3 , HORVU5Hr1G027240.1 , HORVU6Hr1G058930.20 , HORVU6Hr1G058930.21 , HORVU5Hr1G055200.7 , HORVU5Hr1G055200.6 , HORVU5Hr1G055200.5 , HORVU5Hr1G055200.4 , HORVU5Hr1G055200.3 , HORVU5Hr1G055200.2 , HORVU5Hr1G055200.1 , HORVU5Hr1G055200.8 , HORVU6Hr1G058930.19 , HORVU6Hr1G058930.18 , HORVU2Hr1G089940.20 , HORVU6Hr1G058930.11 , HORVU6Hr1G058930.10 , HORVU6Hr1G058930.13 , HORVU6Hr1G058930.12 , HORVU6Hr1G058930.15 , HORVU6Hr1G058930.14 , HORVU6Hr1G058930.17 , HORVU6Hr1G058930.16 , HORVU6Hr1G092960.4 , HORVU6Hr1G092960.5 , HORVU6Hr1G092960.6 , HORVU2Hr1G038740.11 , HORVU2Hr1G038740.16 , HORVU6Hr1G092960.1 , HORVU2Hr1G096360.15 , HORVU2Hr1G038740.18 , HORVU6Hr1G092960.9 , HORVU2Hr1G096360.12 , HORVU6Hr1G092970.3 , HORVU6Hr1G092970.2 , HORVU6Hr1G092970.4 , HORVU2Hr1G089820.9 , HORVU2Hr1G089820.8 , HORVU2Hr1G089940.18 , HORVU2Hr1G089940.19 , HORVU2Hr1G096360.6 , HORVU2Hr1G096360.4 , HORVU2Hr1G096360.5 , HORVU2Hr1G096360.2 , HORVU2Hr1G096360.1 , HORVU2Hr1G096360.8 , HORVU2Hr1G096360.9 , HORVU2Hr1G089940.6 , HORVU2Hr1G089940.7 , HORVU2Hr1G089940.4 , HORVU2Hr1G089940.5 , HORVU2Hr1G089940.2 , HORVU2Hr1G089940.3 , HORVU2Hr1G089940.1 , HORVU5Hr1G125600.1 , HORVU2Hr1G089940.9 , HORVU2Hr1G038740.8 , HORVU2Hr1G038740.1 , HORVU2Hr1G038740.2 , HORVU2Hr1G038740.3 , HORVU2Hr1G038740.5 , HORVU2Hr1G038740.6 , HORVU2Hr1G038740.7 , HORVU6Hr1G014300.1 , HORVU2Hr1G089940.8 , HORVU2Hr1G089940.21 , HORVU2Hr1G038740.12 , HORVU2Hr1G038740.10 , HORVU6Hr1G092960.7 , HORVU2Hr1G038740.14 , HORVU2Hr1G038740.15 , HORVU2Hr1G096360.16 , HORVU2Hr1G096360.11
Wheat TraesCS2D02G376100 , TraesCS5D02G185400 , TraesCS6B02G398000 , TraesCS2A02G198500 , TraesCS6B02G259000 , TraesCS2B02G605900 , TraesCS4A02G286200 , TraesCS2D02G206300 , TraesCS6D02G389400 , TraesCS7A02G191200 , TraesCS4B02G027600 , TraesCS6D02G212900 , TraesCS5B02G178700 , TraesCS7D02G192200 , TraesCS6A02G405700 , TraesCS6B02G450000 , TraesCS2D02G404800 , TraesCS2B02G425600 , TraesCS5D02G112500 , TraesCS5A02G181000 , TraesCS2D02G376000 , TraesCS2D02G376000 , TraesCS5A02G100000 , TraesCS2A02G379900 , TraesCS2D02G404800 , TraesCS2B02G396700 , TraesCS2B02G396700 , TraesCS6B02G450200 , TraesCS6A02G222100 , TraesCS2B02G396800 , TraesCS2B02G225900 , TraesCS2A02G407700 , TraesCS2A02G407700 , TraesCS2B02G077700 , TraesCS2A02G065700 , TraesCS7B02G096000 , TraesCS6A02G405600 , TraesCS6D02G389500 , TraesCS2D02G063900 , TraesCS2A02G379800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G032900 expressed protein -
2 Sobic.008G159100 similar to Calmodulin-2(PubMedID : 29862293)@Ca2+ sensors group(PubMedID : 30367619)@OsCML5 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
3 Sobic.003G238000 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
4 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
5 Sobic.001G476400 - -
6 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
7 Sobic.006G055600 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
8 Sobic.004G283201 - -
9 Sobic.003G141800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@polygalacturonase, putative, expressed -
10 Sobic.006G184800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
11 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
12 Sobic.002G271100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
13 Sobic.002G427400 COBRA-like protein 7 precursor, putative, expressed -
14 Sobic.004G283300 AP2 domain containing protein, expressed -
15 Sobic.001G092600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
16 Sobic.007G057500 - -
17 Sobic.004G245850 - -
18 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
19 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
20 Sobic.004G278200 DUF581 domain containing protein, expressed -


Gene co-expression network
sample Sobic002G125300 Sobic002G125300 Sobic003G032900 Sobic003G032900 Sobic002G125300--Sobic003G032900 Sobic008G159100 Sobic008G159100 Sobic002G125300--Sobic008G159100 Sobic003G238000 Sobic003G238000 Sobic002G125300--Sobic003G238000 Sobic004G025000 Sobic004G025000 Sobic002G125300--Sobic004G025000 Sobic001G476400 Sobic001G476400 Sobic002G125300--Sobic001G476400 Sobic001G063600 Sobic001G063600 Sobic002G125300--Sobic001G063600 Sobic006G055600 Sobic006G055600 Sobic002G125300--Sobic006G055600 Sobic004G283201 Sobic004G283201 Sobic002G125300--Sobic004G283201 Sobic003G141800 Sobic003G141800 Sobic002G125300--Sobic003G141800 Sobic003G032900--Sobic001G063600 Sobic004G278200 Sobic004G278200 Sobic003G032900--Sobic004G278200 Sobic002G427400 Sobic002G427400 Sobic003G032900--Sobic002G427400 Sobic003G032900--Sobic008G159100 Sobic001G080300 Sobic001G080300 Sobic003G032900--Sobic001G080300 Sobic003G032900--Sobic001G476400 Sobic003G373150 Sobic003G373150 Sobic003G032900--Sobic003G373150 Sobic010G080400 Sobic010G080400 Sobic003G032900--Sobic010G080400 Sobic003G032900--Sobic004G025000 Sobic008G159100--Sobic001G063600 Sobic008G159100--Sobic002G427400 Sobic008G000500 Sobic008G000500 Sobic008G159100--Sobic008G000500 Sobic001G051600 Sobic001G051600 Sobic008G159100--Sobic001G051600 Sobic008G159100--Sobic001G476400 Sobic004G264500 Sobic004G264500 Sobic008G159100--Sobic004G264500 Sobic005G231700 Sobic005G231700 Sobic008G159100--Sobic005G231700 Sobic004G245850 Sobic004G245850 Sobic008G159100--Sobic004G245850 Sobic008G159100--Sobic001G080300 Sobic002G293300 Sobic002G293300 Sobic003G238000--Sobic002G293300 Sobic004G059900 Sobic004G059900 Sobic003G238000--Sobic004G059900 Sobic001G436000 Sobic001G436000 Sobic003G238000--Sobic001G436000 Sobic001G523200 Sobic001G523200 Sobic003G238000--Sobic001G523200 Sobic003G238000--Sobic003G032900 Sobic001G358300 Sobic001G358300 Sobic003G238000--Sobic001G358300 Sobic009G180500 Sobic009G180500 Sobic003G238000--Sobic009G180500 Sobic007G140900 Sobic007G140900 Sobic003G238000--Sobic007G140900 Sobic002G379400 Sobic002G379400 Sobic003G238000--Sobic002G379400 Sobic001G081600 Sobic001G081600 Sobic004G025000--Sobic001G081600 Sobic004G025000--Sobic002G379400 Sobic006G095600 Sobic006G095600 Sobic004G025000--Sobic006G095600 Sobic002G344700 Sobic002G344700 Sobic004G025000--Sobic002G344700 Sobic002G330300 Sobic002G330300 Sobic004G025000--Sobic002G330300 Sobic004G025000--Sobic001G476400 Sobic004G025000--Sobic001G063600 Sobic001G314700 Sobic001G314700 Sobic004G025000--Sobic001G314700 Sobic010G076700 Sobic010G076700 Sobic004G025000--Sobic010G076700 Sobic001G476400--Sobic001G063600 Sobic001G476400--Sobic001G051600 Sobic001G473900 Sobic001G473900 Sobic001G476400--Sobic001G473900 Sobic010G076600 Sobic010G076600 Sobic001G476400--Sobic010G076600 Sobic001G476400--Sobic001G081600 Sobic001G476400--Sobic010G080400 Sobic001G476400--Sobic006G095600 Sobic004G283300 Sobic004G283300 Sobic001G476400--Sobic004G283300 Sobic001G489600 Sobic001G489600 Sobic001G476400--Sobic001G489600 Sobic001G063600--Sobic001G476400 Sobic001G063600--Sobic005G231700 Sobic001G063600--Sobic010G080400 Sobic001G063600--Sobic008G159100 Sobic009G170100 Sobic009G170100 Sobic001G063600--Sobic009G170100 Sobic001G063600--Sobic003G032900 Sobic002G068800 Sobic002G068800 Sobic001G063600--Sobic002G068800 Sobic001G063600--Sobic001G081600 Sobic001G063600--Sobic004G283300 Sobic006G055600--Sobic004G283201 Sobic006G005600 Sobic006G005600 Sobic006G055600--Sobic006G005600 Sobic001G092600 Sobic001G092600 Sobic006G055600--Sobic001G092600 Sobic006G055600--Sobic003G373150 Sobic006G184800 Sobic006G184800 Sobic006G055600--Sobic006G184800 Sobic009G163900 Sobic009G163900 Sobic006G055600--Sobic009G163900 Sobic004G321000 Sobic004G321000 Sobic006G055600--Sobic004G321000 Sobic006G055600--Sobic004G278200 Sobic009G201500 Sobic009G201500 Sobic006G055600--Sobic009G201500 Sobic004G283201--Sobic006G055600 Sobic004G283201--Sobic006G005600 Sobic004G283201--Sobic003G373150 Sobic004G283201--Sobic006G184800 Sobic004G283201--Sobic001G092600 Sobic004G283201--Sobic004G283300 Sobic010G016500 Sobic010G016500 Sobic004G283201--Sobic010G016500 Sobic001G125100 Sobic001G125100 Sobic004G283201--Sobic001G125100 Sobic004G283201--Sobic009G201500 Sobic006G267900 Sobic006G267900 Sobic003G141800--Sobic006G267900 Sobic010G071700 Sobic010G071700 Sobic003G141800--Sobic010G071700 Sobic002G189000 Sobic002G189000 Sobic003G141800--Sobic002G189000 Sobic003G141800--Sobic004G283300 Sobic003G141800--Sobic003G373150 Sobic003G233900 Sobic003G233900 Sobic003G141800--Sobic003G233900 Sobic001G430700 Sobic001G430700 Sobic003G141800--Sobic001G430700 Sobic004G285100 Sobic004G285100 Sobic003G141800--Sobic004G285100 Sobic006G032200 Sobic006G032200 Sobic003G141800--Sobic006G032200
Octagon: transcription factors


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