Gene annotation
Transcriptome id Sobic.002G159800.1
Synonym
Functional annotation metallo-beta-lactamase family protein, putative, expressed
UniProt A0A1B6QBN9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g34100.1 : metallo-beta-lactamase family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G122400 expressed protein -
2 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
3 Sobic.004G186300 protein phosphotase protein, putative, expressed -
4 Sobic.003G043800 BT1 family protein, putative, expressed -
5 Sobic.004G060300 DNA binding protein, putative, expressed -
6 Sobic.001G193100 expressed protein -
7 Sobic.003G190600 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
8 Sobic.006G222500 expressed protein -
9 Sobic.003G405600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@exostosin family domain containing protein, expressed -
10 Sobic.010G223400 expressed protein -
11 Sobic.004G040700 expressed protein -
12 Sobic.004G263500 DnaK family protein, putative, expressed K09486: hypoxia up-regulated 1
13 Sobic.010G248000 EDR2, putative, expressed -
14 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
15 Sobic.001G455000 glycosyl hydrolase, family 31, putative, expressed K05546: mannosyl-oligosaccharide alpha-1,3-glucosidase
16 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
17 Sobic.001G414100 expressed protein -
18 Sobic.006G012700 expressed protein -
19 Sobic.003G314300 WD domain, G-beta repeat domain containing protein, expressed -
20 Sobic.009G120600 expressed protein -


Gene co-expression network
sample Sobic002G159800 Sobic002G159800 Sobic003G122400 Sobic003G122400 Sobic002G159800--Sobic003G122400 Sobic004G207900 Sobic004G207900 Sobic002G159800--Sobic004G207900 Sobic004G186300 Sobic004G186300 Sobic002G159800--Sobic004G186300 Sobic003G043800 Sobic003G043800 Sobic002G159800--Sobic003G043800 Sobic004G060300 Sobic004G060300 Sobic002G159800--Sobic004G060300 Sobic001G193100 Sobic001G193100 Sobic002G159800--Sobic001G193100 Sobic003G190600 Sobic003G190600 Sobic002G159800--Sobic003G190600 Sobic006G222500 Sobic006G222500 Sobic002G159800--Sobic006G222500 Sobic003G405600 Sobic003G405600 Sobic002G159800--Sobic003G405600 Sobic004G337300 Sobic004G337300 Sobic003G122400--Sobic004G337300 Sobic003G122400--Sobic004G207900 Sobic010G248000 Sobic010G248000 Sobic003G122400--Sobic010G248000 Sobic006G087400 Sobic006G087400 Sobic003G122400--Sobic006G087400 Sobic003G122400--Sobic002G159800 Sobic002G294100 Sobic002G294100 Sobic003G122400--Sobic002G294100 Sobic002G422400 Sobic002G422400 Sobic003G122400--Sobic002G422400 Sobic002G357900 Sobic002G357900 Sobic003G122400--Sobic002G357900 Sobic003G182300 Sobic003G182300 Sobic003G122400--Sobic003G182300 Sobic001G161700 Sobic001G161700 Sobic004G207900--Sobic001G161700 Sobic009G077600 Sobic009G077600 Sobic004G207900--Sobic009G077600 Sobic004G100200 Sobic004G100200 Sobic004G207900--Sobic004G100200 Sobic001G023100 Sobic001G023100 Sobic004G207900--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic004G207900--Sobic003G346400 Sobic004G025300 Sobic004G025300 Sobic004G207900--Sobic004G025300 Sobic002G141700 Sobic002G141700 Sobic004G207900--Sobic002G141700 Sobic008G129600 Sobic008G129600 Sobic004G207900--Sobic008G129600 Sobic004G207900--Sobic002G294100 Sobic004G186300--Sobic006G222500 Sobic003G270100 Sobic003G270100 Sobic004G186300--Sobic003G270100 Sobic006G219900 Sobic006G219900 Sobic004G186300--Sobic006G219900 Sobic003G308300 Sobic003G308300 Sobic004G186300--Sobic003G308300 Sobic007G148400 Sobic007G148400 Sobic004G186300--Sobic007G148400 Sobic010G253400 Sobic010G253400 Sobic004G186300--Sobic010G253400 Sobic007G218600 Sobic007G218600 Sobic004G186300--Sobic007G218600 Sobic001G408400 Sobic001G408400 Sobic004G186300--Sobic001G408400 Sobic003G346500 Sobic003G346500 Sobic004G186300--Sobic003G346500 Sobic006G217300 Sobic006G217300 Sobic003G043800--Sobic006G217300 Sobic001G122500 Sobic001G122500 Sobic003G043800--Sobic001G122500 Sobic010G026300 Sobic010G026300 Sobic003G043800--Sobic010G026300 Sobic004G124500 Sobic004G124500 Sobic003G043800--Sobic004G124500 Sobic003G043800--Sobic004G207900 Sobic001G378200 Sobic001G378200 Sobic003G043800--Sobic001G378200 Sobic006G207900 Sobic006G207900 Sobic003G043800--Sobic006G207900 Sobic006G055400 Sobic006G055400 Sobic003G043800--Sobic006G055400 Sobic005G207400 Sobic005G207400 Sobic003G043800--Sobic005G207400 Sobic007G118500 Sobic007G118500 Sobic004G060300--Sobic007G118500 Sobic009G122500 Sobic009G122500 Sobic004G060300--Sobic009G122500 Sobic003G394500 Sobic003G394500 Sobic004G060300--Sobic003G394500 Sobic001G335000 Sobic001G335000 Sobic004G060300--Sobic001G335000 Sobic004G060300--Sobic003G346400 Sobic007G030100 Sobic007G030100 Sobic004G060300--Sobic007G030100 Sobic001G389200 Sobic001G389200 Sobic004G060300--Sobic001G389200 Sobic004G084500 Sobic004G084500 Sobic004G060300--Sobic004G084500 Sobic001G012900 Sobic001G012900 Sobic004G060300--Sobic001G012900 Sobic010G223400 Sobic010G223400 Sobic001G193100--Sobic010G223400 Sobic003G394200 Sobic003G394200 Sobic001G193100--Sobic003G394200 Sobic001G193100--Sobic001G012900 Sobic001G061200 Sobic001G061200 Sobic001G193100--Sobic001G061200 Sobic007G173700 Sobic007G173700 Sobic001G193100--Sobic007G173700 Sobic001G193100--Sobic004G084500 Sobic001G193100--Sobic004G060300 Sobic004G078700 Sobic004G078700 Sobic001G193100--Sobic004G078700 Sobic010G074900 Sobic010G074900 Sobic001G193100--Sobic010G074900 Sobic002G395500 Sobic002G395500 Sobic003G190600--Sobic002G395500 Sobic003G190600--Sobic001G389200 Sobic002G023100 Sobic002G023100 Sobic003G190600--Sobic002G023100 Sobic003G190600--Sobic001G378200 Sobic001G485300 Sobic001G485300 Sobic003G190600--Sobic001G485300 Sobic003G190600--Sobic007G118500 Sobic006G012700 Sobic006G012700 Sobic003G190600--Sobic006G012700 Sobic003G190600--Sobic004G060300 Sobic001G047600 Sobic001G047600 Sobic003G190600--Sobic001G047600 Sobic006G222500--Sobic007G148400 Sobic006G222500--Sobic004G186300 Sobic007G146600 Sobic007G146600 Sobic006G222500--Sobic007G146600 Sobic003G404100 Sobic003G404100 Sobic006G222500--Sobic003G404100 Sobic006G222500--Sobic003G270100 Sobic006G222500--Sobic007G218600 Sobic006G222500--Sobic001G193100 Sobic002G419000 Sobic002G419000 Sobic006G222500--Sobic002G419000 Sobic006G222500--Sobic003G308300 Sobic003G117800 Sobic003G117800 Sobic003G405600--Sobic003G117800 Sobic007G077532 Sobic007G077532 Sobic003G405600--Sobic007G077532 Sobic001G257800 Sobic001G257800 Sobic003G405600--Sobic001G257800 Sobic001G114200 Sobic001G114200 Sobic003G405600--Sobic001G114200 Sobic006G060000 Sobic006G060000 Sobic003G405600--Sobic006G060000 Sobic003G405600--Sobic007G030100 Sobic010G213500 Sobic010G213500 Sobic003G405600--Sobic010G213500 Sobic007G172700 Sobic007G172700 Sobic003G405600--Sobic007G172700 Sobic008G055500 Sobic008G055500 Sobic003G405600--Sobic008G055500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.