Gene annotation
Transcriptome id Sobic.002G181700.2
Synonym Sb02g023000
Functional annotation metallo-beta-lactamase family protein, putative, expressed
UniProt A0A1W0W4Q8
Pfam PF12706
Panther DB PTHR12553 PTHR12553:SF38
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13800 : Metallo-hydrolase/oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os09g19920.1 : metallo-beta-lactamase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a046685
Brachypodium KQJ89996
Barley HORVU5Hr1G057570.3 , HORVU5Hr1G057570.2 , HORVU5Hr1G057570.1 , HORVU5Hr1G057570.5 , HORVU5Hr1G057570.4
Wheat TraesCS5B02G190700 , TraesCS5B02G190700 , TraesCS5D02G198600 , TraesCS5D02G198600 , TraesCS5A02G192400
Populus -


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cDNA sequences
Sobic.002G181700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G026300 expressed protein K17815: exonuclease V
2 Sobic.001G253300 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
3 Sobic.003G027500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
4 Sobic.003G433400 OsDegp14 - Putative Deg protease homologue, expressed -
5 Sobic.001G188400 tobamovirus multiplication protein, putative, expressed -
6 Sobic.003G173600 mov34/MPN/PAD-1 family protein, expressed K11866: STAMBP, STAM-binding protein
7 Sobic.009G217400 regulator of chromosome condensation, putative, expressed -
8 Sobic.010G098866 - -
9 Sobic.006G270000 expressed protein -
10 Sobic.002G200000 zinc finger, C3HC4 type, putative, expressed -
11 Sobic.004G143100 PPR repeat domain containing protein, putative, expressed -
12 Sobic.008G055500 Protein-tyrosine phosphatase domain containing protein, expressed -
13 Sobic.009G055500 - -
14 Sobic.006G250800 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
15 Sobic.007G076400 expressed protein -
16 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
17 Sobic.002G054200 Rf1, mitochondrial precursor, putative, expressed -
18 Sobic.002G103900 similar to Late embryogenesis abundant proteins-like(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
19 Sobic.009G162100 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
20 Sobic.008G152000 biotin--protein ligase, putative, expressed K03801: lipoyl(octanoyl) transferase


Gene co-expression network
sample Sobic002G181700 Sobic002G181700 Sobic009G026300 Sobic009G026300 Sobic002G181700--Sobic009G026300 Sobic001G253300 Sobic001G253300 Sobic002G181700--Sobic001G253300 Sobic003G027500 Sobic003G027500 Sobic002G181700--Sobic003G027500 Sobic003G433400 Sobic003G433400 Sobic002G181700--Sobic003G433400 Sobic001G188400 Sobic001G188400 Sobic002G181700--Sobic001G188400 Sobic003G173600 Sobic003G173600 Sobic002G181700--Sobic003G173600 Sobic009G217400 Sobic009G217400 Sobic002G181700--Sobic009G217400 Sobic010G098866 Sobic010G098866 Sobic002G181700--Sobic010G098866 Sobic006G270000 Sobic006G270000 Sobic002G181700--Sobic006G270000 Sobic008G055500 Sobic008G055500 Sobic009G026300--Sobic008G055500 Sobic006G115100 Sobic006G115100 Sobic009G026300--Sobic006G115100 Sobic002G200000 Sobic002G200000 Sobic009G026300--Sobic002G200000 Sobic003G092800 Sobic003G092800 Sobic009G026300--Sobic003G092800 Sobic006G060000 Sobic006G060000 Sobic009G026300--Sobic006G060000 Sobic009G026300--Sobic001G188400 Sobic009G026300--Sobic001G253300 Sobic007G076400 Sobic007G076400 Sobic009G026300--Sobic007G076400 Sobic008G152700 Sobic008G152700 Sobic009G026300--Sobic008G152700 Sobic003G316200 Sobic003G316200 Sobic001G253300--Sobic003G316200 Sobic001G253300--Sobic001G188400 Sobic007G172700 Sobic007G172700 Sobic001G253300--Sobic007G172700 Sobic008G097900 Sobic008G097900 Sobic001G253300--Sobic008G097900 Sobic003G365100 Sobic003G365100 Sobic001G253300--Sobic003G365100 Sobic005G177700 Sobic005G177700 Sobic001G253300--Sobic005G177700 Sobic002G355800 Sobic002G355800 Sobic001G253300--Sobic002G355800 Sobic006G250800 Sobic006G250800 Sobic001G253300--Sobic006G250800 Sobic009G162100 Sobic009G162100 Sobic001G253300--Sobic009G162100 Sobic002G310900 Sobic002G310900 Sobic003G027500--Sobic002G310900 Sobic003G391600 Sobic003G391600 Sobic003G027500--Sobic003G391600 Sobic001G536600 Sobic001G536600 Sobic003G027500--Sobic001G536600 Sobic002G307800 Sobic002G307800 Sobic003G027500--Sobic002G307800 Sobic004G151800 Sobic004G151800 Sobic003G027500--Sobic004G151800 Sobic003G027500--Sobic002G181700 Sobic010G007300 Sobic010G007300 Sobic003G027500--Sobic010G007300 Sobic008G173800 Sobic008G173800 Sobic003G027500--Sobic008G173800 Sobic003G134300 Sobic003G134300 Sobic003G027500--Sobic003G134300 Sobic003G433400--Sobic006G270000 Sobic003G433400--Sobic009G217400 Sobic003G010800 Sobic003G010800 Sobic003G433400--Sobic003G010800 Sobic003G291800 Sobic003G291800 Sobic003G433400--Sobic003G291800 Sobic005G048500 Sobic005G048500 Sobic003G433400--Sobic005G048500 Sobic003G235100 Sobic003G235100 Sobic003G433400--Sobic003G235100 Sobic003G433400--Sobic003G092800 Sobic002G069000 Sobic002G069000 Sobic003G433400--Sobic002G069000 Sobic002G084800 Sobic002G084800 Sobic003G433400--Sobic002G084800 Sobic001G188400--Sobic006G115100 Sobic001G188400--Sobic001G253300 Sobic001G188400--Sobic003G316200 Sobic001G188400--Sobic006G250800 Sobic007G004300 Sobic007G004300 Sobic001G188400--Sobic007G004300 Sobic002G079000 Sobic002G079000 Sobic001G188400--Sobic002G079000 Sobic001G188400--Sobic002G355800 Sobic001G188400--Sobic002G084800 Sobic001G188400--Sobic008G055500 Sobic007G162100 Sobic007G162100 Sobic003G173600--Sobic007G162100 Sobic003G264100 Sobic003G264100 Sobic003G173600--Sobic003G264100 Sobic006G180000 Sobic006G180000 Sobic003G173600--Sobic006G180000 Sobic002G262900 Sobic002G262900 Sobic003G173600--Sobic002G262900 Sobic004G028100 Sobic004G028100 Sobic003G173600--Sobic004G028100 Sobic010G020400 Sobic010G020400 Sobic003G173600--Sobic010G020400 Sobic010G223300 Sobic010G223300 Sobic003G173600--Sobic010G223300 Sobic002G303600 Sobic002G303600 Sobic003G173600--Sobic002G303600 Sobic003G243700 Sobic003G243700 Sobic003G173600--Sobic003G243700 Sobic007G182000 Sobic007G182000 Sobic009G217400--Sobic007G182000 Sobic009G217400--Sobic006G250800 Sobic009G217400--Sobic002G307800 Sobic009G217400--Sobic003G433400 Sobic009G116900 Sobic009G116900 Sobic009G217400--Sobic009G116900 Sobic009G217400--Sobic003G092800 Sobic009G217400--Sobic001G253300 Sobic001G257800 Sobic001G257800 Sobic009G217400--Sobic001G257800 Sobic002G180800 Sobic002G180800 Sobic009G217400--Sobic002G180800 Sobic001G263801 Sobic001G263801 Sobic010G098866--Sobic001G263801 Sobic007G025350 Sobic007G025350 Sobic010G098866--Sobic007G025350 Sobic002G005500 Sobic002G005500 Sobic010G098866--Sobic002G005500 Sobic003G226950 Sobic003G226950 Sobic010G098866--Sobic003G226950 Sobic002G125500 Sobic002G125500 Sobic010G098866--Sobic002G125500 Sobic010G201100 Sobic010G201100 Sobic010G098866--Sobic010G201100 Sobic002G031301 Sobic002G031301 Sobic010G098866--Sobic002G031301 Sobic004G133800 Sobic004G133800 Sobic010G098866--Sobic004G133800 Sobic004G303150 Sobic004G303150 Sobic010G098866--Sobic004G303150 Sobic003G024400 Sobic003G024400 Sobic006G270000--Sobic003G024400 Sobic009G148600 Sobic009G148600 Sobic006G270000--Sobic009G148600 Sobic006G270000--Sobic005G048500 Sobic002G074800 Sobic002G074800 Sobic006G270000--Sobic002G074800 Sobic006G204400 Sobic006G204400 Sobic006G270000--Sobic006G204400 Sobic006G193400 Sobic006G193400 Sobic006G270000--Sobic006G193400 Sobic010G149800 Sobic010G149800 Sobic006G270000--Sobic010G149800 Sobic004G228300 Sobic004G228300 Sobic006G270000--Sobic004G228300 Sobic003G198900 Sobic003G198900 Sobic006G270000--Sobic003G198900
Octagon: transcription factors


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