Gene annotation
Transcriptome id Sobic.002G291600.1
Synonym Sb02g032290
Functional annotation -
UniProt C5X7Q9
Pfam -
Panther DB PTHR37727
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44360 : -
RAP-DB (Rice) LOC_Os09g38080.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a047944
Brachypodium KQJ91364
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G190600 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
2 Sobic.002G023100 heat shock protein DnaJ, putative, expressed -
3 Sobic.004G141400 START domain containing protein, putative, expressed -
4 Sobic.009G050500 nifU, putative, expressed -
5 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
6 Sobic.004G218300 Zinc finger, ZZ type domain containing protein, expressed -
7 Sobic.010G243400 expressed protein -
8 Sobic.007G158900 expressed protein -
9 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
10 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
11 Sobic.007G213000 beta 1,2-xylosyltransferase, putative, expressed K03714: glycoprotein 2-beta-D-xylosyltransferase
12 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
13 Sobic.003G398400 expressed protein -
14 Sobic.004G084500 GPI-anchor transamidase precursor, putative, expressed K05290: GPI-anchor transamidase subunit K
15 Sobic.005G169500 GAUT2/LGT2, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
17 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
18 Sobic.004G202300 eukaryotic translation initiation factor 4B, putative, expressed -
19 Sobic.009G122500 expressed protein -
20 Sobic.003G058500 expressed protein -


Gene co-expression network
sample Sobic002G291600 Sobic002G291600 Sobic003G190600 Sobic003G190600 Sobic002G291600--Sobic003G190600 Sobic002G023100 Sobic002G023100 Sobic002G291600--Sobic002G023100 Sobic004G141400 Sobic004G141400 Sobic002G291600--Sobic004G141400 Sobic009G050500 Sobic009G050500 Sobic002G291600--Sobic009G050500 Sobic010G181600 Sobic010G181600 Sobic002G291600--Sobic010G181600 Sobic004G218300 Sobic004G218300 Sobic002G291600--Sobic004G218300 Sobic010G243400 Sobic010G243400 Sobic002G291600--Sobic010G243400 Sobic007G158900 Sobic007G158900 Sobic002G291600--Sobic007G158900 Sobic001G378200 Sobic001G378200 Sobic002G291600--Sobic001G378200 Sobic002G395500 Sobic002G395500 Sobic003G190600--Sobic002G395500 Sobic001G389200 Sobic001G389200 Sobic003G190600--Sobic001G389200 Sobic003G190600--Sobic002G023100 Sobic003G190600--Sobic001G378200 Sobic001G485300 Sobic001G485300 Sobic003G190600--Sobic001G485300 Sobic007G118500 Sobic007G118500 Sobic003G190600--Sobic007G118500 Sobic006G012700 Sobic006G012700 Sobic003G190600--Sobic006G012700 Sobic004G060300 Sobic004G060300 Sobic003G190600--Sobic004G060300 Sobic001G047600 Sobic001G047600 Sobic003G190600--Sobic001G047600 Sobic002G023100--Sobic003G190600 Sobic003G160500 Sobic003G160500 Sobic002G023100--Sobic003G160500 Sobic003G305900 Sobic003G305900 Sobic002G023100--Sobic003G305900 Sobic002G023100--Sobic007G158900 Sobic001G061200 Sobic001G061200 Sobic002G023100--Sobic001G061200 Sobic002G023100--Sobic009G050500 Sobic003G058500 Sobic003G058500 Sobic002G023100--Sobic003G058500 Sobic002G023100--Sobic010G181600 Sobic002G023100--Sobic004G141400 Sobic007G077532 Sobic007G077532 Sobic004G141400--Sobic007G077532 Sobic008G006000 Sobic008G006000 Sobic004G141400--Sobic008G006000 Sobic004G141400--Sobic010G181600 Sobic004G259300 Sobic004G259300 Sobic004G141400--Sobic004G259300 Sobic007G192400 Sobic007G192400 Sobic004G141400--Sobic007G192400 Sobic001G356200 Sobic001G356200 Sobic004G141400--Sobic001G356200 Sobic004G004100 Sobic004G004100 Sobic004G141400--Sobic004G004100 Sobic003G117800 Sobic003G117800 Sobic004G141400--Sobic003G117800 Sobic003G353700 Sobic003G353700 Sobic004G141400--Sobic003G353700 Sobic009G050500--Sobic002G023100 Sobic002G431000 Sobic002G431000 Sobic009G050500--Sobic002G431000 Sobic009G050500--Sobic002G291600 Sobic003G043800 Sobic003G043800 Sobic009G050500--Sobic003G043800 Sobic009G050500--Sobic003G305900 Sobic003G346500 Sobic003G346500 Sobic009G050500--Sobic003G346500 Sobic003G377000 Sobic003G377000 Sobic009G050500--Sobic003G377000 Sobic002G139600 Sobic002G139600 Sobic009G050500--Sobic002G139600 Sobic003G270600 Sobic003G270600 Sobic009G050500--Sobic003G270600 Sobic010G181600--Sobic003G058500 Sobic001G424800 Sobic001G424800 Sobic010G181600--Sobic001G424800 Sobic010G181600--Sobic003G117800 Sobic001G475300 Sobic001G475300 Sobic010G181600--Sobic001G475300 Sobic010G181600--Sobic008G006000 Sobic010G181600--Sobic003G353700 Sobic007G218600 Sobic007G218600 Sobic010G181600--Sobic007G218600 Sobic010G181600--Sobic004G004100 Sobic003G250400 Sobic003G250400 Sobic010G181600--Sobic003G250400 Sobic003G398400 Sobic003G398400 Sobic004G218300--Sobic003G398400 Sobic006G130200 Sobic006G130200 Sobic004G218300--Sobic006G130200 Sobic004G218300--Sobic004G259300 Sobic009G228400 Sobic009G228400 Sobic004G218300--Sobic009G228400 Sobic006G215100 Sobic006G215100 Sobic004G218300--Sobic006G215100 Sobic003G407100 Sobic003G407100 Sobic004G218300--Sobic003G407100 Sobic004G218300--Sobic007G192400 Sobic002G147100 Sobic002G147100 Sobic004G218300--Sobic002G147100 Sobic002G317400 Sobic002G317400 Sobic004G218300--Sobic002G317400 Sobic008G165000 Sobic008G165000 Sobic010G243400--Sobic008G165000 Sobic007G056100 Sobic007G056100 Sobic010G243400--Sobic007G056100 Sobic010G261600 Sobic010G261600 Sobic010G243400--Sobic010G261600 Sobic003G243700 Sobic003G243700 Sobic010G243400--Sobic003G243700 Sobic009G041700 Sobic009G041700 Sobic010G243400--Sobic009G041700 Sobic009G224000 Sobic009G224000 Sobic010G243400--Sobic009G224000 Sobic004G003401 Sobic004G003401 Sobic010G243400--Sobic004G003401 Sobic008G173400 Sobic008G173400 Sobic010G243400--Sobic008G173400 Sobic001G421400 Sobic001G421400 Sobic010G243400--Sobic001G421400 Sobic009G199500 Sobic009G199500 Sobic007G158900--Sobic009G199500 Sobic007G158900--Sobic010G181600 Sobic007G158900--Sobic007G192400 Sobic009G059400 Sobic009G059400 Sobic007G158900--Sobic009G059400 Sobic007G158900--Sobic002G023100 Sobic001G017200 Sobic001G017200 Sobic007G158900--Sobic001G017200 Sobic007G158900--Sobic007G218600 Sobic007G158900--Sobic004G218300 Sobic007G158900--Sobic008G006000 Sobic001G465400 Sobic001G465400 Sobic001G378200--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic001G378200--Sobic001G112400 Sobic001G378200--Sobic006G012700 Sobic004G078700 Sobic004G078700 Sobic001G378200--Sobic004G078700 Sobic004G039400 Sobic004G039400 Sobic001G378200--Sobic004G039400 Sobic001G443200 Sobic001G443200 Sobic001G378200--Sobic001G443200 Sobic001G008100 Sobic001G008100 Sobic001G378200--Sobic001G008100 Sobic002G262200 Sobic002G262200 Sobic001G378200--Sobic002G262200 Sobic005G207400 Sobic005G207400 Sobic001G378200--Sobic005G207400
Octagon: transcription factors


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