Gene annotation
Transcriptome id Sobic.005G169500.1,Sobic.005G169500.3,Sobic.005G169500.5,Sobic.005G169500.6,Sobic.005G169500.2,Sobic.005G169500.4
Synonym GAUT4, Sb05g022970
Functional annotation GAUT2/LGT2, putative, expressed
UniProt A0A1Z5RJC2 , C5Y5D7 , A0A1Z5RJ04 , A0A1Z5RK44
Pfam PF01501
Panther DB PTHR32116 PTHR32116:SF0
NCBI CDD -
KEGG Orthology K13648; alpha-1,4-galacturonosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT1G06780 : galacturonosyltransferase 6,galacturonosyltransferase 4
RAP-DB (Rice) LOC_Os11g37980.1 : GAUT2/LGT2, putative, expressed
MaizeGDB (Corn) Zm00025a015833
Brachypodium PNT63374
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
2 Sobic.001G245400 - -
3 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
4 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
5 Sobic.001G424800 myosin heavy chain-related, putative, expressed -
6 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
7 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
8 Sobic.001G057400 expressed protein -
9 Sobic.008G055500 Protein-tyrosine phosphatase domain containing protein, expressed -
10 Sobic.001G475300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
11 Sobic.004G218300 Zinc finger, ZZ type domain containing protein, expressed -
12 Sobic.005G090200 - -
13 Sobic.004G350700 kelch repeat protein, putative, expressed -
14 Sobic.001G501900 appr-1-p processing enzyme family protein, putative, expressed -
15 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
16 Sobic.005G063200 expressed protein -
17 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
18 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
19 Sobic.003G058500 expressed protein -
20 Sobic.005G185500 - -


Gene co-expression network
sample Sobic005G169500 Sobic005G169500 Sobic003G117800 Sobic003G117800 Sobic005G169500--Sobic003G117800 Sobic001G245400 Sobic001G245400 Sobic005G169500--Sobic001G245400 Sobic003G353700 Sobic003G353700 Sobic005G169500--Sobic003G353700 Sobic010G181600 Sobic010G181600 Sobic005G169500--Sobic010G181600 Sobic001G424800 Sobic001G424800 Sobic005G169500--Sobic001G424800 Sobic007G192400 Sobic007G192400 Sobic005G169500--Sobic007G192400 Sobic003G385300 Sobic003G385300 Sobic005G169500--Sobic003G385300 Sobic001G057400 Sobic001G057400 Sobic005G169500--Sobic001G057400 Sobic008G055500 Sobic008G055500 Sobic005G169500--Sobic008G055500 Sobic003G117800--Sobic001G424800 Sobic003G117800--Sobic003G385300 Sobic003G394500 Sobic003G394500 Sobic003G117800--Sobic003G394500 Sobic003G117800--Sobic001G057400 Sobic008G152700 Sobic008G152700 Sobic003G117800--Sobic008G152700 Sobic001G149000 Sobic001G149000 Sobic003G117800--Sobic001G149000 Sobic001G356200 Sobic001G356200 Sobic003G117800--Sobic001G356200 Sobic001G385000 Sobic001G385000 Sobic003G117800--Sobic001G385000 Sobic009G046900 Sobic009G046900 Sobic003G117800--Sobic009G046900 Sobic010G024400 Sobic010G024400 Sobic001G245400--Sobic010G024400 Sobic001G245400--Sobic003G353700 Sobic004G082800 Sobic004G082800 Sobic001G245400--Sobic004G082800 Sobic008G036600 Sobic008G036600 Sobic001G245400--Sobic008G036600 Sobic001G245400--Sobic005G169500 Sobic010G202200 Sobic010G202200 Sobic001G245400--Sobic010G202200 Sobic001G024400 Sobic001G024400 Sobic001G245400--Sobic001G024400 Sobic003G236000 Sobic003G236000 Sobic001G245400--Sobic003G236000 Sobic006G117700 Sobic006G117700 Sobic001G245400--Sobic006G117700 Sobic003G353700--Sobic007G192400 Sobic003G353700--Sobic008G036600 Sobic005G063200 Sobic005G063200 Sobic003G353700--Sobic005G063200 Sobic003G353700--Sobic001G024400 Sobic007G039200 Sobic007G039200 Sobic003G353700--Sobic007G039200 Sobic003G353700--Sobic010G181600 Sobic003G353700--Sobic003G236000 Sobic004G074600 Sobic004G074600 Sobic003G353700--Sobic004G074600 Sobic008G006000 Sobic008G006000 Sobic003G353700--Sobic008G006000 Sobic003G058500 Sobic003G058500 Sobic010G181600--Sobic003G058500 Sobic010G181600--Sobic001G424800 Sobic010G181600--Sobic003G117800 Sobic001G475300 Sobic001G475300 Sobic010G181600--Sobic001G475300 Sobic010G181600--Sobic008G006000 Sobic010G181600--Sobic003G353700 Sobic007G218600 Sobic007G218600 Sobic010G181600--Sobic007G218600 Sobic004G004100 Sobic004G004100 Sobic010G181600--Sobic004G004100 Sobic003G250400 Sobic003G250400 Sobic010G181600--Sobic003G250400 Sobic001G424800--Sobic003G117800 Sobic001G424800--Sobic003G058500 Sobic004G350700 Sobic004G350700 Sobic001G424800--Sobic004G350700 Sobic001G424800--Sobic001G356200 Sobic001G424800--Sobic001G149000 Sobic001G280500 Sobic001G280500 Sobic001G424800--Sobic001G280500 Sobic001G424800--Sobic003G394500 Sobic001G424800--Sobic003G385300 Sobic001G378800 Sobic001G378800 Sobic001G424800--Sobic001G378800 Sobic007G192400--Sobic003G353700 Sobic007G192400--Sobic008G006000 Sobic007G077532 Sobic007G077532 Sobic007G192400--Sobic007G077532 Sobic007G192400--Sobic010G181600 Sobic009G252300 Sobic009G252300 Sobic007G192400--Sobic009G252300 Sobic004G259300 Sobic004G259300 Sobic007G192400--Sobic004G259300 Sobic002G203600 Sobic002G203600 Sobic007G192400--Sobic002G203600 Sobic007G192400--Sobic008G036600 Sobic004G141400 Sobic004G141400 Sobic007G192400--Sobic004G141400 Sobic003G385300--Sobic001G149000 Sobic003G402800 Sobic003G402800 Sobic003G385300--Sobic003G402800 Sobic004G077300 Sobic004G077300 Sobic003G385300--Sobic004G077300 Sobic004G064200 Sobic004G064200 Sobic003G385300--Sobic004G064200 Sobic004G176200 Sobic004G176200 Sobic003G385300--Sobic004G176200 Sobic001G257800 Sobic001G257800 Sobic003G385300--Sobic001G257800 Sobic005G225500 Sobic005G225500 Sobic003G385300--Sobic005G225500 Sobic003G385300--Sobic007G039200 Sobic002G074800 Sobic002G074800 Sobic003G385300--Sobic002G074800 Sobic001G057400--Sobic003G117800 Sobic001G057400--Sobic007G077532 Sobic005G185500 Sobic005G185500 Sobic001G057400--Sobic005G185500 Sobic001G057400--Sobic003G353700 Sobic003G428000 Sobic003G428000 Sobic001G057400--Sobic003G428000 Sobic010G255900 Sobic010G255900 Sobic001G057400--Sobic010G255900 Sobic007G142600 Sobic007G142600 Sobic001G057400--Sobic007G142600 Sobic001G057400--Sobic003G385300 Sobic001G057400--Sobic008G055500 Sobic008G055500--Sobic003G402800 Sobic006G060000 Sobic006G060000 Sobic008G055500--Sobic006G060000 Sobic008G055500--Sobic004G350700 Sobic008G055500--Sobic003G385300 Sobic008G055500--Sobic003G117800 Sobic008G055500--Sobic001G257800 Sobic008G055500--Sobic008G152700 Sobic008G055500--Sobic004G176200 Sobic001G501900 Sobic001G501900 Sobic008G055500--Sobic001G501900
Octagon: transcription factors


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