Gene annotation
Transcriptome id Sobic.002G315700.2,Sobic.002G315700.4,Sobic.002G315700.3
Synonym Sb02g034480
Functional annotation NC domain-containing protein, putative, expressed
UniProt A0A1B6QEE0
Pfam PF04970
Panther DB PTHR13943 PTHR13943:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02700 : NC domain-containing protein-related
RAP-DB (Rice) LOC_Os05g24560.1 : NC domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a048206
Brachypodium KQJ92382
Barley HORVU5Hr1G043560.3 , HORVU5Hr1G043560.5 , HORVU5Hr1G043560.4 , HORVU5Hr1G043560.6
Wheat TraesCS1D02G274800 , TraesCS1B02G284400 , TraesCS5A02G135900 , TraesCS5D02G142500
Populus -


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cDNA sequences
Sobic.002G315700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G021100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, putative, expressed K12734: peptidyl-prolyl cis-trans isomerase-like 3
2 Sobic.004G078900 AGAP003371-PA, putative, expressed -
3 Sobic.001G037000 PHD finger protein, putative, expressed -
4 Sobic.003G386700 OsRhmbd5 - Putative Rhomboid homologue, expressed -
5 Sobic.001G195700 DUF677 domain containing protein, putative, expressed -
6 Sobic.004G333500 proteasome maturation factor UMP1 family protein, expressed K11599: POMP, proteasome maturation protein
7 Sobic.002G205300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
8 Sobic.004G164000 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
9 Sobic.002G335300 uncharacterized Cys-rich domain containing protein, putative, expressed -
10 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
11 Sobic.003G296800 expressed protein -
12 Sobic.009G232900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
13 Sobic.001G383500 expressed protein -
14 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
15 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
16 Sobic.006G157500 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
17 Sobic.001G034600 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
18 Sobic.009G180000 OsCam1-3 - Calmodulin, expressed K02183: calmodulin
19 Sobic.003G344600 BAG domain containing protein, expressed -
20 Sobic.002G223600 MORN repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic002G315700 Sobic002G315700 Sobic010G021100 Sobic010G021100 Sobic002G315700--Sobic010G021100 Sobic004G078900 Sobic004G078900 Sobic002G315700--Sobic004G078900 Sobic001G037000 Sobic001G037000 Sobic002G315700--Sobic001G037000 Sobic003G386700 Sobic003G386700 Sobic002G315700--Sobic003G386700 Sobic001G195700 Sobic001G195700 Sobic002G315700--Sobic001G195700 Sobic004G333500 Sobic004G333500 Sobic002G315700--Sobic004G333500 Sobic002G205300 Sobic002G205300 Sobic002G315700--Sobic002G205300 Sobic004G164000 Sobic004G164000 Sobic002G315700--Sobic004G164000 Sobic002G335300 Sobic002G335300 Sobic002G315700--Sobic002G335300 Sobic010G021100--Sobic001G037000 Sobic010G066300 Sobic010G066300 Sobic010G021100--Sobic010G066300 Sobic004G247200 Sobic004G247200 Sobic010G021100--Sobic004G247200 Sobic001G204900 Sobic001G204900 Sobic010G021100--Sobic001G204900 Sobic010G217900 Sobic010G217900 Sobic010G021100--Sobic010G217900 Sobic009G222600 Sobic009G222600 Sobic010G021100--Sobic009G222600 Sobic010G021100--Sobic002G205300 Sobic001G047700 Sobic001G047700 Sobic010G021100--Sobic001G047700 Sobic001G422900 Sobic001G422900 Sobic010G021100--Sobic001G422900 Sobic004G078900--Sobic002G335300 Sobic009G232800 Sobic009G232800 Sobic004G078900--Sobic009G232800 Sobic004G078900--Sobic010G021100 Sobic007G147600 Sobic007G147600 Sobic004G078900--Sobic007G147600 Sobic004G024200 Sobic004G024200 Sobic004G078900--Sobic004G024200 Sobic002G223600 Sobic002G223600 Sobic004G078900--Sobic002G223600 Sobic001G101500 Sobic001G101500 Sobic004G078900--Sobic001G101500 Sobic004G032000 Sobic004G032000 Sobic004G078900--Sobic004G032000 Sobic004G122000 Sobic004G122000 Sobic004G078900--Sobic004G122000 Sobic003G249800 Sobic003G249800 Sobic001G037000--Sobic003G249800 Sobic003G063200 Sobic003G063200 Sobic001G037000--Sobic003G063200 Sobic001G037000--Sobic001G422900 Sobic010G204600 Sobic010G204600 Sobic001G037000--Sobic010G204600 Sobic001G067601 Sobic001G067601 Sobic001G037000--Sobic001G067601 Sobic009G016201 Sobic009G016201 Sobic001G037000--Sobic009G016201 Sobic003G265200 Sobic003G265200 Sobic001G037000--Sobic003G265200 Sobic001G037000--Sobic002G205300 Sobic003G181500 Sobic003G181500 Sobic001G037000--Sobic003G181500 Sobic008G187001 Sobic008G187001 Sobic003G386700--Sobic008G187001 Sobic004G097100 Sobic004G097100 Sobic003G386700--Sobic004G097100 Sobic010G223600 Sobic010G223600 Sobic003G386700--Sobic010G223600 Sobic002G388900 Sobic002G388900 Sobic003G386700--Sobic002G388900 Sobic003G386700--Sobic001G037000 Sobic001G256700 Sobic001G256700 Sobic003G386700--Sobic001G256700 Sobic009G032000 Sobic009G032000 Sobic003G386700--Sobic009G032000 Sobic001G383700 Sobic001G383700 Sobic003G386700--Sobic001G383700 Sobic001G195200 Sobic001G195200 Sobic003G386700--Sobic001G195200 Sobic004G248800 Sobic004G248800 Sobic001G195700--Sobic004G248800 Sobic006G256500 Sobic006G256500 Sobic001G195700--Sobic006G256500 Sobic007G226100 Sobic007G226100 Sobic001G195700--Sobic007G226100 Sobic001G054200 Sobic001G054200 Sobic001G195700--Sobic001G054200 Sobic010G039800 Sobic010G039800 Sobic001G195700--Sobic010G039800 Sobic003G115800 Sobic003G115800 Sobic001G195700--Sobic003G115800 Sobic004G079100 Sobic004G079100 Sobic001G195700--Sobic004G079100 Sobic003G273100 Sobic003G273100 Sobic001G195700--Sobic003G273100 Sobic001G350501 Sobic001G350501 Sobic001G195700--Sobic001G350501 Sobic009G180000 Sobic009G180000 Sobic004G333500--Sobic009G180000 Sobic001G084900 Sobic001G084900 Sobic004G333500--Sobic001G084900 Sobic003G215700 Sobic003G215700 Sobic004G333500--Sobic003G215700 Sobic007G018300 Sobic007G018300 Sobic004G333500--Sobic007G018300 Sobic006G083500 Sobic006G083500 Sobic004G333500--Sobic006G083500 Sobic001G483100 Sobic001G483100 Sobic004G333500--Sobic001G483100 Sobic001G533500 Sobic001G533500 Sobic004G333500--Sobic001G533500 Sobic001G537200 Sobic001G537200 Sobic004G333500--Sobic001G537200 Sobic010G204500 Sobic010G204500 Sobic004G333500--Sobic010G204500 Sobic002G205300--Sobic001G037000 Sobic005G103900 Sobic005G103900 Sobic002G205300--Sobic005G103900 Sobic002G282400 Sobic002G282400 Sobic002G205300--Sobic002G282400 Sobic002G205300--Sobic001G422900 Sobic005G229700 Sobic005G229700 Sobic002G205300--Sobic005G229700 Sobic007G107000 Sobic007G107000 Sobic002G205300--Sobic007G107000 Sobic002G205300--Sobic009G016201 Sobic002G205300--Sobic003G249800 Sobic009G070400 Sobic009G070400 Sobic002G205300--Sobic009G070400 Sobic003G131300 Sobic003G131300 Sobic004G164000--Sobic003G131300 Sobic007G019501 Sobic007G019501 Sobic004G164000--Sobic007G019501 Sobic009G001900 Sobic009G001900 Sobic004G164000--Sobic009G001900 Sobic004G159000 Sobic004G159000 Sobic004G164000--Sobic004G159000 Sobic002G090700 Sobic002G090700 Sobic004G164000--Sobic002G090700 Sobic001G392800 Sobic001G392800 Sobic004G164000--Sobic001G392800 Sobic001G309500 Sobic001G309500 Sobic004G164000--Sobic001G309500 Sobic008G136800 Sobic008G136800 Sobic004G164000--Sobic008G136800 Sobic008G025700 Sobic008G025700 Sobic004G164000--Sobic008G025700 Sobic004G212900 Sobic004G212900 Sobic002G335300--Sobic004G212900 Sobic003G344600 Sobic003G344600 Sobic002G335300--Sobic003G344600 Sobic003G357300 Sobic003G357300 Sobic002G335300--Sobic003G357300 Sobic001G009500 Sobic001G009500 Sobic002G335300--Sobic001G009500 Sobic009G074100 Sobic009G074100 Sobic002G335300--Sobic009G074100 Sobic008G103700 Sobic008G103700 Sobic002G335300--Sobic008G103700 Sobic006G046900 Sobic006G046900 Sobic002G335300--Sobic006G046900 Sobic009G243400 Sobic009G243400 Sobic002G335300--Sobic009G243400 Sobic003G211200 Sobic003G211200 Sobic002G335300--Sobic003G211200
Octagon: transcription factors


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