Gene annotation
Transcriptome id Sobic.002G353700.1
Synonym Sb02g037550
Functional annotation ZOS7-06 - C2H2 zinc finger protein, expressed
UniProt C5XCG0
Pfam -
Panther DB PTHR10593 PTHR10593:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66730 : C2H2-like zinc finger protein
RAP-DB (Rice) LOC_Os07g39310.1 : ZOS7-06 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a048513 , Zm00025a005649 , Zm00025a014537 , Zm00025a015003 , Zm00025a028450 , Zm00025a047929 , Zm00025a010802 , Zm00025a006887 , Zm00025a038400 , Zm00025a001203
Brachypodium KQK08378 , KQJ84077 , KQJ84076 , KQK15525 , KQK14746 , KQK14745 , KQK14744 , KQK14743 , KQK14742 , KQK14741 , KQK14740 , KQK14749 , KQK14748 , KQJ96746 , KQK11405 , KQK23107 , KQJ91417 , KQJ91416 , KQJ91415 , PNT74594 , PNT74593 , PNT74592 , PNT74591 , KQK03154 , KQK00679 , KQK14747 , KQK14738 , KQK14739 , KQK14737 , KQK03537
Barley HORVU2Hr1G036710.15 , HORVU2Hr1G036710.14 , HORVU2Hr1G036710.17 , HORVU2Hr1G036710.16 , HORVU2Hr1G036710.11 , HORVU2Hr1G036710.10 , HORVU2Hr1G036710.13 , HORVU2Hr1G036710.12 , HORVU2Hr1G036710.19 , HORVU2Hr1G036710.18 , HORVU4Hr1G070950.7 , HORVU4Hr1G070950.6 , HORVU4Hr1G070950.4 , HORVU4Hr1G070950.3 , HORVU4Hr1G070950.2 , HORVU4Hr1G070950.1 , HORVU4Hr1G070950.9 , HORVU4Hr1G070950.8 , HORVU4Hr1G070950.13 , HORVU4Hr1G070950.11 , HORVU4Hr1G070950.10 , HORVU5Hr1G099940.4 , HORVU5Hr1G099940.1 , HORVU5Hr1G099940.2 , HORVU5Hr1G099940.3 , HORVU2Hr1G036710.20 , HORVU2Hr1G036710.21 , HORVU2Hr1G036710.22 , HORVU2Hr1G036710.23 , HORVU2Hr1G036710.24 , HORVU2Hr1G036710.26 , HORVU2Hr1G036710.27 , HORVU2Hr1G036710.28 , HORVU2Hr1G036710.29 , HORVU4Hr1G070950.12 , HORVU2Hr1G036710.1 , HORVU2Hr1G036710.3 , HORVU2Hr1G036710.2 , HORVU2Hr1G036710.5 , HORVU2Hr1G036710.4 , HORVU2Hr1G036710.7 , HORVU2Hr1G036710.6 , HORVU2Hr1G036710.9 , HORVU2Hr1G036710.8
Wheat TraesCS2B02G218900 , TraesCS2B02G421100 , TraesCS5D02G364900 , TraesCS5D02G364900 , TraesCS2A02G188400 , TraesCS2A02G188400 , TraesCS4B02G262400 , TraesCS3D02G107300 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS3A02G205800 , TraesCS3B02G497200 , TraesCS3B02G237700 , TraesCS3A02G105100 , TraesCS3B02G123600 , TraesCS6B02G271000 , TraesCS6B02G271000 , TraesCS6B02G271000 , TraesCS5A02G356100 , TraesCS6D02G116300 , TraesCS4A02G041400 , TraesCS6A02G126000 , TraesCS2A02G403200 , TraesCS2A02G403200 , TraesCS3D02G449900 , TraesCS3A02G170700 , TraesCS6A02G254500 , TraesCS6D02G235800 , TraesCS5B02G358600 , TraesCS6B02G154000 , TraesCS3B02G195900 , TraesCS6D02G235800 , TraesCS4D02G262500 , TraesCS3D02G209800 , TraesCS2D02G199300 , TraesCS2D02G199300 , TraesCS2D02G199300
Populus -


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cDNA sequences
Sobic.002G353700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G153600 WRKY94, expressed -
2 Sobic.003G245900 membrane associated DUF588 domain containing protein, putative, expressed -
3 Sobic.003G144400 homeobox protein knotted-1-like 6, putative, expressed -
4 Sobic.004G249500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
5 Sobic.009G014400 expressed protein -
6 Sobic.010G280100 expressed protein -
7 Sobic.004G339600 ankyrin repeat domain containing protein, expressed -
8 Sobic.003G174800 - -
9 Sobic.001G087100 far-red light perception and signal transduction(PubMedID : 14963106)@phytochrome C, putative, expressed -
10 Sobic.001G429300 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
11 Sobic.008G124400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
12 Sobic.006G228700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_CrRLK1L-1.3 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
13 Sobic.001G151900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF593 domain containing protein, expressed -
14 Sobic.001G118500 - -
15 Sobic.010G092100 PCF-like (ClassI) Subclade 5 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP-domain protein, putative, expressed -
16 Sobic.008G175800 methyl-CpG binding domain containing protein, putative, expressed -
17 Sobic.008G000900 - -
18 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
19 Sobic.001G076200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf44, putative, expressed K07399: resB, cytochrome c biogenesis protein
20 Sobic.004G246800 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic002G353700 Sobic002G353700 Sobic008G153600 Sobic008G153600 Sobic002G353700--Sobic008G153600 Sobic003G245900 Sobic003G245900 Sobic002G353700--Sobic003G245900 Sobic003G144400 Sobic003G144400 Sobic002G353700--Sobic003G144400 Sobic004G249500 Sobic004G249500 Sobic002G353700--Sobic004G249500 Sobic009G014400 Sobic009G014400 Sobic002G353700--Sobic009G014400 Sobic010G280100 Sobic010G280100 Sobic002G353700--Sobic010G280100 Sobic004G339600 Sobic004G339600 Sobic002G353700--Sobic004G339600 Sobic003G174800 Sobic003G174800 Sobic002G353700--Sobic003G174800 Sobic001G087100 Sobic001G087100 Sobic002G353700--Sobic001G087100 Sobic009G045700 Sobic009G045700 Sobic008G153600--Sobic009G045700 Sobic007G094801 Sobic007G094801 Sobic008G153600--Sobic007G094801 Sobic008G136200 Sobic008G136200 Sobic008G153600--Sobic008G136200 Sobic008G034600 Sobic008G034600 Sobic008G153600--Sobic008G034600 Sobic009G197200 Sobic009G197200 Sobic008G153600--Sobic009G197200 Sobic009G087800 Sobic009G087800 Sobic008G153600--Sobic009G087800 Sobic004G211400 Sobic004G211400 Sobic008G153600--Sobic004G211400 Sobic008G153600--Sobic003G144400 Sobic007G205800 Sobic007G205800 Sobic008G153600--Sobic007G205800 Sobic001G485600 Sobic001G485600 Sobic003G245900--Sobic001G485600 Sobic001G429300 Sobic001G429300 Sobic003G245900--Sobic001G429300 Sobic003G324100 Sobic003G324100 Sobic003G245900--Sobic003G324100 Sobic009G112400 Sobic009G112400 Sobic003G245900--Sobic009G112400 Sobic010G268300 Sobic010G268300 Sobic003G245900--Sobic010G268300 Sobic002G122600 Sobic002G122600 Sobic003G245900--Sobic002G122600 Sobic008G068601 Sobic008G068601 Sobic003G245900--Sobic008G068601 Sobic003G245900--Sobic003G174800 Sobic006G038400 Sobic006G038400 Sobic003G245900--Sobic006G038400 Sobic003G144400--Sobic008G153600 Sobic003G144400--Sobic009G045700 Sobic001G469400 Sobic001G469400 Sobic003G144400--Sobic001G469400 Sobic001G274700 Sobic001G274700 Sobic003G144400--Sobic001G274700 Sobic009G214600 Sobic009G214600 Sobic003G144400--Sobic009G214600 Sobic003G144400--Sobic006G038400 Sobic006G204200 Sobic006G204200 Sobic003G144400--Sobic006G204200 Sobic003G144400--Sobic007G094801 Sobic009G114600 Sobic009G114600 Sobic003G144400--Sobic009G114600 Sobic001G076200 Sobic001G076200 Sobic004G249500--Sobic001G076200 Sobic003G030400 Sobic003G030400 Sobic004G249500--Sobic003G030400 Sobic008G101500 Sobic008G101500 Sobic004G249500--Sobic008G101500 Sobic009G238100 Sobic009G238100 Sobic004G249500--Sobic009G238100 Sobic001G426400 Sobic001G426400 Sobic004G249500--Sobic001G426400 Sobic008G177850 Sobic008G177850 Sobic004G249500--Sobic008G177850 Sobic004G246800 Sobic004G246800 Sobic004G249500--Sobic004G246800 Sobic003G114100 Sobic003G114100 Sobic004G249500--Sobic003G114100 Sobic005G009300 Sobic005G009300 Sobic004G249500--Sobic005G009300 Sobic007G158100 Sobic007G158100 Sobic009G014400--Sobic007G158100 Sobic010G115800 Sobic010G115800 Sobic009G014400--Sobic010G115800 Sobic006G210100 Sobic006G210100 Sobic009G014400--Sobic006G210100 Sobic006G246900 Sobic006G246900 Sobic009G014400--Sobic006G246900 Sobic009G014400--Sobic008G153600 Sobic009G014400--Sobic009G045700 Sobic003G259901 Sobic003G259901 Sobic009G014400--Sobic003G259901 Sobic004G290800 Sobic004G290800 Sobic009G014400--Sobic004G290800 Sobic009G140500 Sobic009G140500 Sobic009G014400--Sobic009G140500 Sobic009G198900 Sobic009G198900 Sobic010G280100--Sobic009G198900 Sobic004G119000 Sobic004G119000 Sobic010G280100--Sobic004G119000 Sobic003G324000 Sobic003G324000 Sobic010G280100--Sobic003G324000 Sobic007G052900 Sobic007G052900 Sobic010G280100--Sobic007G052900 Sobic010G280100--Sobic008G136200 Sobic010G280100--Sobic009G087800 Sobic010G280100--Sobic007G205800 Sobic001G368400 Sobic001G368400 Sobic010G280100--Sobic001G368400 Sobic006G273200 Sobic006G273200 Sobic010G280100--Sobic006G273200 Sobic001G153400 Sobic001G153400 Sobic004G339600--Sobic001G153400 Sobic008G165700 Sobic008G165700 Sobic004G339600--Sobic008G165700 Sobic006G171700 Sobic006G171700 Sobic004G339600--Sobic006G171700 Sobic003G368800 Sobic003G368800 Sobic004G339600--Sobic003G368800 Sobic009G029500 Sobic009G029500 Sobic004G339600--Sobic009G029500 Sobic001G136600 Sobic001G136600 Sobic004G339600--Sobic001G136600 Sobic009G209200 Sobic009G209200 Sobic004G339600--Sobic009G209200 Sobic004G227300 Sobic004G227300 Sobic004G339600--Sobic004G227300 Sobic002G259400 Sobic002G259400 Sobic004G339600--Sobic002G259400 Sobic008G000900 Sobic008G000900 Sobic003G174800--Sobic008G000900 Sobic003G174800--Sobic001G087100 Sobic006G214400 Sobic006G214400 Sobic003G174800--Sobic006G214400 Sobic010G143200 Sobic010G143200 Sobic003G174800--Sobic010G143200 Sobic007G043900 Sobic007G043900 Sobic003G174800--Sobic007G043900 Sobic004G175600 Sobic004G175600 Sobic003G174800--Sobic004G175600 Sobic003G174800--Sobic001G485600 Sobic001G043400 Sobic001G043400 Sobic003G174800--Sobic001G043400 Sobic003G174800--Sobic010G268300 Sobic001G087100--Sobic001G043400 Sobic004G232000 Sobic004G232000 Sobic001G087100--Sobic004G232000 Sobic005G015100 Sobic005G015100 Sobic001G087100--Sobic005G015100 Sobic001G087100--Sobic003G174800 Sobic009G015800 Sobic009G015800 Sobic001G087100--Sobic009G015800 Sobic002G076000 Sobic002G076000 Sobic001G087100--Sobic002G076000 Sobic001G087100--Sobic007G043900 Sobic009G225200 Sobic009G225200 Sobic001G087100--Sobic009G225200 Sobic010G166000 Sobic010G166000 Sobic001G087100--Sobic010G166000
Octagon: transcription factors


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