Gene annotation
Transcriptome id Sobic.008G124400.1
Synonym Sb08g017660
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
universal stress protein domain containing protein, putative, expressed
UniProt C5YPL2
Pfam PF00582
Panther DB PTHR31964 PTHR31964:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR AT2G47710 : Adenine nucleotide alpha hydrolases-like superfamily protein
RAP-DB (Rice) LOC_Os12g36640.2 : universal stress protein domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a054320
Brachypodium KQJ86400 , KQK14684 , PNT74583
Barley HORVU2Hr1G019500.10 , HORVU5Hr1G024160.2 , HORVU5Hr1G024160.3 , HORVU5Hr1G024160.1 , HORVU5Hr1G024160.4 , HORVU2Hr1G019500.7 , HORVU2Hr1G019500.9 , HORVU2Hr1G019500.8 , HORVU2Hr1G019500.6 , HORVU2Hr1G019500.5 , HORVU2Hr1G019500.4 , HORVU2Hr1G019500.3 , HORVU2Hr1G019500.2 , HORVU2Hr1G019500.1
Wheat TraesCS5A02G092000 , TraesCS2A02G111700 , TraesCS2A02G112400 , TraesCS2D02G112900 , TraesCS2A02G112500 , TraesCS2D02G112300 , TraesCS2B02G130500 , TraesCS2B02G131200 , TraesCS2B02G131300 , TraesCS5B02G097600 , TraesCS5B02G097600 , TraesCS5D02G104200
Populus -


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cDNA sequences
Sobic.008G124400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G233000 - -
2 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
3 Sobic.009G233300 60S ribosomal protein L18a-1, putative, expressed -
4 Sobic.008G165700 expressed protein -
5 Sobic.001G372500 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
6 Sobic.001G351100 LOL3, putative, expressed -
7 Sobic.007G054100 stress-induced protein, putative, expressed -
8 Sobic.004G088100 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
9 Sobic.001G478400 MADS-box transcription factor family("PubMedID : 26759170,PubMedID : 24597475")@OsMADS47 - MADS-box family gene with MIKCc type-box, expressed -
10 Sobic.007G189500 - -
11 Sobic.009G137800 expressed protein -
12 Sobic.006G028300 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
13 Sobic.003G221800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
14 Sobic.008G042500 expressed protein -
15 Sobic.008G000900 - -
16 Sobic.006G258500 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
17 Sobic.010G280100 expressed protein -
18 Sobic.003G328700 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed K03013: RPB5, DNA-directed RNA polymerases I, II, and III subunit RPABC1
19 Sobic.001G284800 histone H3, putative, expressed K11253: histone H3
20 Sobic.008G125600 - -


Gene co-expression network
sample Sobic008G124400 Sobic008G124400 Sobic004G233000 Sobic004G233000 Sobic008G124400--Sobic004G233000 Sobic003G308700 Sobic003G308700 Sobic008G124400--Sobic003G308700 Sobic009G233300 Sobic009G233300 Sobic008G124400--Sobic009G233300 Sobic008G165700 Sobic008G165700 Sobic008G124400--Sobic008G165700 Sobic001G372500 Sobic001G372500 Sobic008G124400--Sobic001G372500 Sobic001G351100 Sobic001G351100 Sobic008G124400--Sobic001G351100 Sobic007G054100 Sobic007G054100 Sobic008G124400--Sobic007G054100 Sobic004G088100 Sobic004G088100 Sobic008G124400--Sobic004G088100 Sobic001G478400 Sobic001G478400 Sobic008G124400--Sobic001G478400 Sobic001G298600 Sobic001G298600 Sobic004G233000--Sobic001G298600 Sobic009G232700 Sobic009G232700 Sobic004G233000--Sobic009G232700 Sobic004G233000--Sobic008G165700 Sobic002G187801 Sobic002G187801 Sobic004G233000--Sobic002G187801 Sobic006G038400 Sobic006G038400 Sobic004G233000--Sobic006G038400 Sobic008G189400 Sobic008G189400 Sobic004G233000--Sobic008G189400 Sobic001G429300 Sobic001G429300 Sobic004G233000--Sobic001G429300 Sobic010G280100 Sobic010G280100 Sobic004G233000--Sobic010G280100 Sobic004G233000--Sobic009G233300 Sobic002G073900 Sobic002G073900 Sobic003G308700--Sobic002G073900 Sobic003G308700--Sobic007G054100 Sobic002G174900 Sobic002G174900 Sobic003G308700--Sobic002G174900 Sobic002G273700 Sobic002G273700 Sobic003G308700--Sobic002G273700 Sobic006G172900 Sobic006G172900 Sobic003G308700--Sobic006G172900 Sobic009G094800 Sobic009G094800 Sobic003G308700--Sobic009G094800 Sobic001G387600 Sobic001G387600 Sobic003G308700--Sobic001G387600 Sobic009G008100 Sobic009G008100 Sobic003G308700--Sobic009G008100 Sobic003G308700--Sobic002G187801 Sobic006G273200 Sobic006G273200 Sobic009G233300--Sobic006G273200 Sobic009G233300--Sobic008G165700 Sobic009G233300--Sobic002G187801 Sobic006G119800 Sobic006G119800 Sobic009G233300--Sobic006G119800 Sobic009G233300--Sobic001G387600 Sobic009G233300--Sobic001G372500 Sobic001G284800 Sobic001G284800 Sobic009G233300--Sobic001G284800 Sobic003G309900 Sobic003G309900 Sobic009G233300--Sobic003G309900 Sobic003G176600 Sobic003G176600 Sobic009G233300--Sobic003G176600 Sobic008G165700--Sobic006G273200 Sobic008G165700--Sobic009G233300 Sobic010G268300 Sobic010G268300 Sobic008G165700--Sobic010G268300 Sobic008G165700--Sobic002G187801 Sobic002G365100 Sobic002G365100 Sobic008G165700--Sobic002G365100 Sobic001G191100 Sobic001G191100 Sobic008G165700--Sobic001G191100 Sobic003G123000 Sobic003G123000 Sobic008G165700--Sobic003G123000 Sobic003G018900 Sobic003G018900 Sobic008G165700--Sobic003G018900 Sobic003G000150 Sobic003G000150 Sobic008G165700--Sobic003G000150 Sobic001G372500--Sobic009G233300 Sobic007G120401 Sobic007G120401 Sobic001G372500--Sobic007G120401 Sobic003G413500 Sobic003G413500 Sobic001G372500--Sobic003G413500 Sobic009G137800 Sobic009G137800 Sobic001G372500--Sobic009G137800 Sobic001G372500--Sobic001G387600 Sobic007G189500 Sobic007G189500 Sobic001G372500--Sobic007G189500 Sobic001G372500--Sobic006G273200 Sobic001G372500--Sobic003G309900 Sobic006G194500 Sobic006G194500 Sobic001G372500--Sobic006G194500 Sobic005G072200 Sobic005G072200 Sobic001G351100--Sobic005G072200 Sobic003G422700 Sobic003G422700 Sobic001G351100--Sobic003G422700 Sobic006G042200 Sobic006G042200 Sobic001G351100--Sobic006G042200 Sobic004G251300 Sobic004G251300 Sobic001G351100--Sobic004G251300 Sobic004G340800 Sobic004G340800 Sobic001G351100--Sobic004G340800 Sobic002G137800 Sobic002G137800 Sobic001G351100--Sobic002G137800 Sobic001G351100--Sobic002G073900 Sobic003G403500 Sobic003G403500 Sobic001G351100--Sobic003G403500 Sobic001G351100--Sobic007G054100 Sobic007G054100--Sobic003G308700 Sobic007G054100--Sobic006G042200 Sobic007G054100--Sobic002G273700 Sobic007G054100--Sobic002G073900 Sobic003G153800 Sobic003G153800 Sobic007G054100--Sobic003G153800 Sobic007G054100--Sobic002G174900 Sobic007G054100--Sobic002G187801 Sobic004G096300 Sobic004G096300 Sobic007G054100--Sobic004G096300 Sobic005G090600 Sobic005G090600 Sobic007G054100--Sobic005G090600 Sobic009G082200 Sobic009G082200 Sobic004G088100--Sobic009G082200 Sobic008G125600 Sobic008G125600 Sobic004G088100--Sobic008G125600 Sobic003G386600 Sobic003G386600 Sobic004G088100--Sobic003G386600 Sobic001G240800 Sobic001G240800 Sobic004G088100--Sobic001G240800 Sobic005G222900 Sobic005G222900 Sobic004G088100--Sobic005G222900 Sobic003G264901 Sobic003G264901 Sobic004G088100--Sobic003G264901 Sobic004G088100--Sobic007G054100 Sobic003G368800 Sobic003G368800 Sobic004G088100--Sobic003G368800 Sobic004G088100--Sobic001G429300 Sobic008G025900 Sobic008G025900 Sobic001G478400--Sobic008G025900 Sobic005G055150 Sobic005G055150 Sobic001G478400--Sobic005G055150 Sobic006G258500 Sobic006G258500 Sobic001G478400--Sobic006G258500 Sobic004G118700 Sobic004G118700 Sobic001G478400--Sobic004G118700 Sobic008G041700 Sobic008G041700 Sobic001G478400--Sobic008G041700 Sobic001G479300 Sobic001G479300 Sobic001G478400--Sobic001G479300 Sobic010G074500 Sobic010G074500 Sobic001G478400--Sobic010G074500 Sobic001G479500 Sobic001G479500 Sobic001G478400--Sobic001G479500 Sobic010G026400 Sobic010G026400 Sobic001G478400--Sobic010G026400
Octagon: transcription factors


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