Gene annotation
Transcriptome id Sobic.002G363000.1
Synonym Sb02g038285
Functional annotation csAtPR5, putative, expressed
UniProt A0A1B6QFB1 , A0A109NDW2
Pfam -
Panther DB PTHR33065 PTHR33065:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g04590.1 : csAtPR5, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU1Hr1G009330.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G413800 expressed protein K13141: integrator complex subunit 4
2 Sobic.008G021000 exostosin family domain containing protein, expressed -
3 Sobic.001G034500 SEC14 cytosolic factor family protein, putative, expressed -
4 Sobic.003G227100 adaptin, putative, expressed -
5 Sobic.001G386100 RNA recognition motif containing protein, putative, expressed K13157: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
6 Sobic.003G212900 zinc ion binding protein, putative, expressed -
7 Sobic.007G042900 BSD domain-containing protein, putative, expressed K03141: TFIIH1, GTF2H1, transcription initiation factor TFIIH subunit 1
8 Sobic.001G477700 WD domain, G-beta repeat domain containing protein, expressed K11807: WDTC1, WD and tetratricopeptide repeats protein 1
9 Sobic.006G203300 GPR89A, putative, expressed -
10 Sobic.007G180600 UBX domain-containing protein, putative, expressed -
11 Sobic.004G257200 phosphatidylinositol transfer, putative, expressed -
12 Sobic.006G224800 expressed protein -
13 Sobic.003G314300 WD domain, G-beta repeat domain containing protein, expressed -
14 Sobic.001G097500 expressed protein -
15 Sobic.010G254900 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K14321: NUPL2, NUP42, nucleoporin-like protein 2
16 Sobic.003G062300 NF-X1-type zinc finger protein, putative, expressed K15683: NFXL1, NF-X1-type zinc finger protein NFXL1
17 Sobic.007G005500 ECT protein, putative, expressed -
18 Sobic.002G295500 expressed protein -
19 Sobic.002G245000 HECT-domain domain containing protein, expressed K10591: NEDD4, E3 ubiquitin-protein ligase NEDD4
20 Sobic.001G186850 - -


Gene co-expression network
sample Sobic002G363000 Sobic002G363000 Sobic001G413800 Sobic001G413800 Sobic002G363000--Sobic001G413800 Sobic008G021000 Sobic008G021000 Sobic002G363000--Sobic008G021000 Sobic001G034500 Sobic001G034500 Sobic002G363000--Sobic001G034500 Sobic003G227100 Sobic003G227100 Sobic002G363000--Sobic003G227100 Sobic001G386100 Sobic001G386100 Sobic002G363000--Sobic001G386100 Sobic003G212900 Sobic003G212900 Sobic002G363000--Sobic003G212900 Sobic007G042900 Sobic007G042900 Sobic002G363000--Sobic007G042900 Sobic001G477700 Sobic001G477700 Sobic002G363000--Sobic001G477700 Sobic006G203300 Sobic006G203300 Sobic002G363000--Sobic006G203300 Sobic001G413800--Sobic001G477700 Sobic006G180700 Sobic006G180700 Sobic001G413800--Sobic006G180700 Sobic001G413800--Sobic001G034500 Sobic006G154100 Sobic006G154100 Sobic001G413800--Sobic006G154100 Sobic006G281700 Sobic006G281700 Sobic001G413800--Sobic006G281700 Sobic001G413800--Sobic007G042900 Sobic010G204400 Sobic010G204400 Sobic001G413800--Sobic010G204400 Sobic004G068500 Sobic004G068500 Sobic001G413800--Sobic004G068500 Sobic001G413800--Sobic002G363000 Sobic009G166600 Sobic009G166600 Sobic008G021000--Sobic009G166600 Sobic006G224300 Sobic006G224300 Sobic008G021000--Sobic006G224300 Sobic001G005600 Sobic001G005600 Sobic008G021000--Sobic001G005600 Sobic008G021000--Sobic003G212900 Sobic002G313900 Sobic002G313900 Sobic008G021000--Sobic002G313900 Sobic008G021000--Sobic006G203300 Sobic001G135500 Sobic001G135500 Sobic008G021000--Sobic001G135500 Sobic003G150900 Sobic003G150900 Sobic008G021000--Sobic003G150900 Sobic006G224800 Sobic006G224800 Sobic008G021000--Sobic006G224800 Sobic001G034500--Sobic001G477700 Sobic003G284000 Sobic003G284000 Sobic001G034500--Sobic003G284000 Sobic001G034500--Sobic006G154100 Sobic001G004100 Sobic001G004100 Sobic001G034500--Sobic001G004100 Sobic001G034500--Sobic001G135500 Sobic001G034500--Sobic001G413800 Sobic001G034500--Sobic003G212900 Sobic001G097500 Sobic001G097500 Sobic001G034500--Sobic001G097500 Sobic001G034500--Sobic007G042900 Sobic003G227100--Sobic006G224800 Sobic005G110499 Sobic005G110499 Sobic003G227100--Sobic005G110499 Sobic003G240700 Sobic003G240700 Sobic003G227100--Sobic003G240700 Sobic001G369000 Sobic001G369000 Sobic003G227100--Sobic001G369000 Sobic003G050900 Sobic003G050900 Sobic003G227100--Sobic003G050900 Sobic004G261600 Sobic004G261600 Sobic003G227100--Sobic004G261600 Sobic008G040700 Sobic008G040700 Sobic003G227100--Sobic008G040700 Sobic006G056200 Sobic006G056200 Sobic003G227100--Sobic006G056200 Sobic003G209200 Sobic003G209200 Sobic003G227100--Sobic003G209200 Sobic010G086600 Sobic010G086600 Sobic001G386100--Sobic010G086600 Sobic002G292900 Sobic002G292900 Sobic001G386100--Sobic002G292900 Sobic001G542450 Sobic001G542450 Sobic001G386100--Sobic001G542450 Sobic002G245000 Sobic002G245000 Sobic001G386100--Sobic002G245000 Sobic001G386100--Sobic007G042900 Sobic002G369701 Sobic002G369701 Sobic001G386100--Sobic002G369701 Sobic006G210700 Sobic006G210700 Sobic001G386100--Sobic006G210700 Sobic009G249700 Sobic009G249700 Sobic001G386100--Sobic009G249700 Sobic004G320700 Sobic004G320700 Sobic001G386100--Sobic004G320700 Sobic003G212900--Sobic001G135500 Sobic010G077500 Sobic010G077500 Sobic003G212900--Sobic010G077500 Sobic002G422100 Sobic002G422100 Sobic003G212900--Sobic002G422100 Sobic003G416700 Sobic003G416700 Sobic003G212900--Sobic003G416700 Sobic001G042200 Sobic001G042200 Sobic003G212900--Sobic001G042200 Sobic004G309900 Sobic004G309900 Sobic003G212900--Sobic004G309900 Sobic003G212900--Sobic006G224800 Sobic008G058800 Sobic008G058800 Sobic003G212900--Sobic008G058800 Sobic002G295500 Sobic002G295500 Sobic003G212900--Sobic002G295500 Sobic004G345400 Sobic004G345400 Sobic007G042900--Sobic004G345400 Sobic007G042900--Sobic009G249700 Sobic007G042900--Sobic001G042200 Sobic007G042900--Sobic005G110499 Sobic010G169900 Sobic010G169900 Sobic007G042900--Sobic010G169900 Sobic003G182300 Sobic003G182300 Sobic007G042900--Sobic003G182300 Sobic003G394200 Sobic003G394200 Sobic007G042900--Sobic003G394200 Sobic006G139100 Sobic006G139100 Sobic007G042900--Sobic006G139100 Sobic007G042900--Sobic001G005600 Sobic006G131000 Sobic006G131000 Sobic001G477700--Sobic006G131000 Sobic001G096000 Sobic001G096000 Sobic001G477700--Sobic001G096000 Sobic001G477700--Sobic007G042900 Sobic001G477700--Sobic001G034500 Sobic007G196900 Sobic007G196900 Sobic001G477700--Sobic007G196900 Sobic007G180600 Sobic007G180600 Sobic001G477700--Sobic007G180600 Sobic001G477700--Sobic001G413800 Sobic001G477700--Sobic003G284000 Sobic001G477700--Sobic010G204400 Sobic006G203300--Sobic003G394200 Sobic003G346400 Sobic003G346400 Sobic006G203300--Sobic003G346400 Sobic006G203300--Sobic010G169900 Sobic004G236200 Sobic004G236200 Sobic006G203300--Sobic004G236200 Sobic001G445500 Sobic001G445500 Sobic006G203300--Sobic001G445500 Sobic004G254800 Sobic004G254800 Sobic006G203300--Sobic004G254800 Sobic001G308400 Sobic001G308400 Sobic006G203300--Sobic001G308400 Sobic001G474400 Sobic001G474400 Sobic006G203300--Sobic001G474400 Sobic003G036500 Sobic003G036500 Sobic006G203300--Sobic003G036500
Octagon: transcription factors


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