Gene annotation
Transcriptome id Sobic.002G412200.1
Synonym Sb02g042490
Functional annotation expressed protein
UniProt A0A1B6QG65
Pfam -
Panther DB PTHR34681 PTHR34681:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G15790 : -
RAP-DB (Rice) LOC_Os07g47460.1 : expressed protein
MaizeGDB (Corn) Zm00025a015402
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G054301 - -
2 Sobic.009G198700 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
3 Sobic.009G105300 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.005G004800 PMR5, putative, expressed -
5 Sobic.001G345900 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.001G012400 "UDP-glucose glucosyltransferase, up-regulated under drought stress "(PubMedID : 24655390)@p-hydroxymandelonitrile-O-glucosyltransferase(PubMedID : 10585420)@-(PubMedID : 27964718)@UDP-glucose:p-hydroxymandelonitrile-O-glucosyltransferase. in vitro substrate regiospecificity(PubMedID : 12946413)@"Cyanohydrin beta-glucosyltransferase, similar to UDP-glucose glucosyltransferase, dhurrin biosynthesis"(PubMedID : 10585420)@cytokinin-O-glucosyltransferase 2, putative, expressed K13030: cyanohydrin beta-glucosyltransferase
7 Sobic.004G176100 expressed protein -
8 Sobic.002G072200 expressed protein -
9 Sobic.007G008400 - -
10 Sobic.009G232200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
11 Sobic.003G136600 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.002G347300 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
13 Sobic.007G209100 expressed protein -
14 Sobic.006G250400 expressed protein -
15 Sobic.001G094800 similar to IAA1 protein(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA13 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
16 Sobic.004G116800 harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
18 Sobic.001G534532 - -
19 Sobic.003G099166 - -
20 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic002G412200 Sobic002G412200 Sobic009G054301 Sobic009G054301 Sobic002G412200--Sobic009G054301 Sobic009G198700 Sobic009G198700 Sobic002G412200--Sobic009G198700 Sobic009G105300 Sobic009G105300 Sobic002G412200--Sobic009G105300 Sobic005G004800 Sobic005G004800 Sobic002G412200--Sobic005G004800 Sobic001G345900 Sobic001G345900 Sobic002G412200--Sobic001G345900 Sobic001G012400 Sobic001G012400 Sobic002G412200--Sobic001G012400 Sobic004G176100 Sobic004G176100 Sobic002G412200--Sobic004G176100 Sobic002G072200 Sobic002G072200 Sobic002G412200--Sobic002G072200 Sobic007G008400 Sobic007G008400 Sobic002G412200--Sobic007G008400 Sobic009G054301--Sobic009G105300 Sobic009G162700 Sobic009G162700 Sobic009G054301--Sobic009G162700 Sobic007G154300 Sobic007G154300 Sobic009G054301--Sobic007G154300 Sobic003G387500 Sobic003G387500 Sobic009G054301--Sobic003G387500 Sobic004G244600 Sobic004G244600 Sobic009G054301--Sobic004G244600 Sobic001G224300 Sobic001G224300 Sobic009G054301--Sobic001G224300 Sobic005G087200 Sobic005G087200 Sobic009G054301--Sobic005G087200 Sobic006G036400 Sobic006G036400 Sobic009G054301--Sobic006G036400 Sobic002G218900 Sobic002G218900 Sobic009G054301--Sobic002G218900 Sobic008G056100 Sobic008G056100 Sobic009G198700--Sobic008G056100 Sobic007G028400 Sobic007G028400 Sobic009G198700--Sobic007G028400 Sobic009G189300 Sobic009G189300 Sobic009G198700--Sobic009G189300 Sobic005G196700 Sobic005G196700 Sobic009G198700--Sobic005G196700 Sobic006G177600 Sobic006G177600 Sobic009G198700--Sobic006G177600 Sobic009G198700--Sobic002G412200 Sobic010G083300 Sobic010G083300 Sobic009G198700--Sobic010G083300 Sobic002G196900 Sobic002G196900 Sobic009G198700--Sobic002G196900 Sobic010G189900 Sobic010G189900 Sobic009G198700--Sobic010G189900 Sobic009G105300--Sobic009G054301 Sobic009G105300--Sobic009G162700 Sobic009G231600 Sobic009G231600 Sobic009G105300--Sobic009G231600 Sobic009G105300--Sobic005G087200 Sobic001G086050 Sobic001G086050 Sobic009G105300--Sobic001G086050 Sobic002G205500 Sobic002G205500 Sobic009G105300--Sobic002G205500 Sobic009G105300--Sobic003G387500 Sobic001G094800 Sobic001G094800 Sobic009G105300--Sobic001G094800 Sobic009G105300--Sobic007G154300 Sobic002G171600 Sobic002G171600 Sobic005G004800--Sobic002G171600 Sobic004G296100 Sobic004G296100 Sobic005G004800--Sobic004G296100 Sobic008G144300 Sobic008G144300 Sobic005G004800--Sobic008G144300 Sobic004G147400 Sobic004G147400 Sobic005G004800--Sobic004G147400 Sobic004G049800 Sobic004G049800 Sobic005G004800--Sobic004G049800 Sobic002G311601 Sobic002G311601 Sobic005G004800--Sobic002G311601 Sobic010G258700 Sobic010G258700 Sobic005G004800--Sobic010G258700 Sobic008G037200 Sobic008G037200 Sobic005G004800--Sobic008G037200 Sobic003G174850 Sobic003G174850 Sobic005G004800--Sobic003G174850 Sobic001G334900 Sobic001G334900 Sobic001G345900--Sobic001G334900 Sobic002G347300 Sobic002G347300 Sobic001G345900--Sobic002G347300 Sobic001G012200 Sobic001G012200 Sobic001G345900--Sobic001G012200 Sobic001G012600 Sobic001G012600 Sobic001G345900--Sobic001G012600 Sobic001G345900--Sobic002G072200 Sobic004G257700 Sobic004G257700 Sobic001G345900--Sobic004G257700 Sobic004G328601 Sobic004G328601 Sobic001G345900--Sobic004G328601 Sobic009G033400 Sobic009G033400 Sobic001G345900--Sobic009G033400 Sobic001G012300 Sobic001G012300 Sobic001G345900--Sobic001G012300 Sobic001G012400--Sobic002G347300 Sobic001G012400--Sobic001G012200 Sobic001G012500 Sobic001G012500 Sobic001G012400--Sobic001G012500 Sobic001G012400--Sobic001G012600 Sobic001G035600 Sobic001G035600 Sobic001G012400--Sobic001G035600 Sobic001G012400--Sobic001G012300 Sobic001G012400--Sobic001G334900 Sobic005G096101 Sobic005G096101 Sobic001G012400--Sobic005G096101 Sobic009G221900 Sobic009G221900 Sobic001G012400--Sobic009G221900 Sobic008G055700 Sobic008G055700 Sobic004G176100--Sobic008G055700 Sobic005G015600 Sobic005G015600 Sobic004G176100--Sobic005G015600 Sobic001G471800 Sobic001G471800 Sobic004G176100--Sobic001G471800 Sobic004G047600 Sobic004G047600 Sobic004G176100--Sobic004G047600 Sobic006G278300 Sobic006G278300 Sobic004G176100--Sobic006G278300 Sobic007G176700 Sobic007G176700 Sobic004G176100--Sobic007G176700 Sobic003G082700 Sobic003G082700 Sobic004G176100--Sobic003G082700 Sobic005G112000 Sobic005G112000 Sobic004G176100--Sobic005G112000 Sobic003G215350 Sobic003G215350 Sobic004G176100--Sobic003G215350 Sobic009G032600 Sobic009G032600 Sobic002G072200--Sobic009G032600 Sobic006G075000 Sobic006G075000 Sobic002G072200--Sobic006G075000 Sobic003G062000 Sobic003G062000 Sobic002G072200--Sobic003G062000 Sobic009G226900 Sobic009G226900 Sobic002G072200--Sobic009G226900 Sobic009G232200 Sobic009G232200 Sobic002G072200--Sobic009G232200 Sobic002G072200--Sobic006G036400 Sobic010G086800 Sobic010G086800 Sobic002G072200--Sobic010G086800 Sobic001G208600 Sobic001G208600 Sobic002G072200--Sobic001G208600 Sobic003G099166 Sobic003G099166 Sobic002G072200--Sobic003G099166 Sobic006G166900 Sobic006G166900 Sobic007G008400--Sobic006G166900 Sobic007G008400--Sobic004G147400 Sobic009G253300 Sobic009G253300 Sobic007G008400--Sobic009G253300 Sobic007G008400--Sobic004G296100 Sobic005G145100 Sobic005G145100 Sobic007G008400--Sobic005G145100 Sobic007G008400--Sobic008G037200 Sobic002G028500 Sobic002G028500 Sobic007G008400--Sobic002G028500 Sobic001G170900 Sobic001G170900 Sobic007G008400--Sobic001G170900 Sobic007G008400--Sobic001G208600
Octagon: transcription factors


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