Gene annotation
Transcriptome id Sobic.003G027600.1
Synonym Sb03g002590
Functional annotation xylosyltransferase, putative, expressed
UniProt C5XL92
Pfam PF02485
Panther DB PTHR19297 PTHR19297:SF75
NCBI CDD KOG0799; Branching enzyme
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT3G15350 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os01g10440.1 : xylosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a042236 , Zm00025a022973 , Zm00025a004883
Brachypodium KQJ85585 , KQK17772 , KQK03198
Barley HORVU4Hr1G005140.4 , HORVU4Hr1G080470.1 , HORVU4Hr1G005140.1 , HORVU4Hr1G005140.2 , HORVU4Hr1G005140.3 , HORVU7Hr1G121520.4 , HORVU7Hr1G121520.3 , HORVU3Hr1G026890.4 , HORVU3Hr1G026890.5 , HORVU3Hr1G026890.2 , HORVU3Hr1G026890.3 , HORVU3Hr1G026890.1 , HORVU7Hr1G121520.5 , HORVU7Hr1G121520.1 , HORVU7Hr1G121520.2 , HORVU5Hr1G000700.5 , HORVU5Hr1G000700.6 , HORVU7Hr1G083990.4 , HORVU7Hr1G083990.2 , HORVU7Hr1G083990.3 , HORVU7Hr1G083990.1
Wheat TraesCS7B02G475200 , TraesCS7B02G418200 , TraesCS5A02G003200 , TraesCS5A02G003200 , TraesCS4D02G029400 , TraesCS4A02G281300 , TraesCS3B02G158500 , TraesCS3A02G313400 , TraesCS7B02G252700 , TraesCS7A02G551700 , TraesCS5B02G003400 , TraesCS3D02G140900 , TraesCS7D02G348700 , TraesCS5D02G003900 , TraesCS7A02G374700 , TraesCS7A02G551800 , TraesCS4B02G061200 , TraesCS4B02G031700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G034750 - -
2 Sobic.010G225201 - -
3 Sobic.002G345000 expressed protein -
4 Sobic.002G382100 LTPL56 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.003G284100 expressed protein -
6 Sobic.003G008000 cyclin-T1-1, putative, expressed -
7 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
8 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
9 Sobic.003G410300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
10 Sobic.003G139200 - -
11 Sobic.009G085300 - -
12 Sobic.002G243300 amino acid permease family protein, putative, expressed -
13 Sobic.002G361500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Indole-acetic acid (IAA)-amido synthetase(PubMedID : 30367619)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
14 Sobic.001G504500 expressed protein -
15 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
16 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
17 Sobic.003G202400 expressed protein -
18 Sobic.005G108700 - -
19 Sobic.001G536100 lysM domain containing protein, putative, expressed -
20 Sobic.001G350100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@RING-H2 finger protein ATL5H precursor, putative, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55


Gene co-expression network
sample Sobic003G027600 Sobic003G027600 Sobic002G034750 Sobic002G034750 Sobic003G027600--Sobic002G034750 Sobic010G225201 Sobic010G225201 Sobic003G027600--Sobic010G225201 Sobic002G345000 Sobic002G345000 Sobic003G027600--Sobic002G345000 Sobic002G382100 Sobic002G382100 Sobic003G027600--Sobic002G382100 Sobic003G284100 Sobic003G284100 Sobic003G027600--Sobic003G284100 Sobic003G008000 Sobic003G008000 Sobic003G027600--Sobic003G008000 Sobic003G212000 Sobic003G212000 Sobic003G027600--Sobic003G212000 Sobic003G234500 Sobic003G234500 Sobic003G027600--Sobic003G234500 Sobic003G410300 Sobic003G410300 Sobic003G027600--Sobic003G410300 Sobic002G034750--Sobic010G225201 Sobic004G349450 Sobic004G349450 Sobic002G034750--Sobic004G349450 Sobic002G034750--Sobic003G212000 Sobic002G243300 Sobic002G243300 Sobic002G034750--Sobic002G243300 Sobic002G034750--Sobic003G234500 Sobic008G071300 Sobic008G071300 Sobic002G034750--Sobic008G071300 Sobic006G120900 Sobic006G120900 Sobic002G034750--Sobic006G120900 Sobic002G034750--Sobic003G008000 Sobic001G504500 Sobic001G504500 Sobic002G034750--Sobic001G504500 Sobic010G225201--Sobic002G034750 Sobic010G039000 Sobic010G039000 Sobic010G225201--Sobic010G039000 Sobic010G225201--Sobic001G504500 Sobic008G006000 Sobic008G006000 Sobic010G225201--Sobic008G006000 Sobic010G255900 Sobic010G255900 Sobic010G225201--Sobic010G255900 Sobic002G397900 Sobic002G397900 Sobic010G225201--Sobic002G397900 Sobic004G100100 Sobic004G100100 Sobic010G225201--Sobic004G100100 Sobic005G170000 Sobic005G170000 Sobic010G225201--Sobic005G170000 Sobic007G219500 Sobic007G219500 Sobic010G225201--Sobic007G219500 Sobic003G202400 Sobic003G202400 Sobic002G345000--Sobic003G202400 Sobic003G137600 Sobic003G137600 Sobic002G345000--Sobic003G137600 Sobic002G345000--Sobic007G219500 Sobic002G345000--Sobic003G212000 Sobic002G345000--Sobic010G225201 Sobic002G345000--Sobic004G100100 Sobic004G173700 Sobic004G173700 Sobic002G345000--Sobic004G173700 Sobic002G345000--Sobic003G284100 Sobic004G165200 Sobic004G165200 Sobic002G345000--Sobic004G165200 Sobic002G361500 Sobic002G361500 Sobic002G382100--Sobic002G361500 Sobic004G328100 Sobic004G328100 Sobic002G382100--Sobic004G328100 Sobic010G198400 Sobic010G198400 Sobic002G382100--Sobic010G198400 Sobic002G424200 Sobic002G424200 Sobic002G382100--Sobic002G424200 Sobic001G093666 Sobic001G093666 Sobic002G382100--Sobic001G093666 Sobic006G038700 Sobic006G038700 Sobic002G382100--Sobic006G038700 Sobic006G199500 Sobic006G199500 Sobic002G382100--Sobic006G199500 Sobic005G144500 Sobic005G144500 Sobic002G382100--Sobic005G144500 Sobic004G020200 Sobic004G020200 Sobic002G382100--Sobic004G020200 Sobic003G284100--Sobic003G212000 Sobic002G113200 Sobic002G113200 Sobic003G284100--Sobic002G113200 Sobic003G013700 Sobic003G013700 Sobic003G284100--Sobic003G013700 Sobic003G089100 Sobic003G089100 Sobic003G284100--Sobic003G089100 Sobic006G070564 Sobic006G070564 Sobic003G284100--Sobic006G070564 Sobic004G279200 Sobic004G279200 Sobic003G284100--Sobic004G279200 Sobic004G247500 Sobic004G247500 Sobic003G284100--Sobic004G247500 Sobic009G157800 Sobic009G157800 Sobic003G284100--Sobic009G157800 Sobic003G284100--Sobic003G137600 Sobic010G104600 Sobic010G104600 Sobic003G008000--Sobic010G104600 Sobic004G046800 Sobic004G046800 Sobic003G008000--Sobic004G046800 Sobic008G029800 Sobic008G029800 Sobic003G008000--Sobic008G029800 Sobic009G044700 Sobic009G044700 Sobic003G008000--Sobic009G044700 Sobic004G007400 Sobic004G007400 Sobic003G008000--Sobic004G007400 Sobic008G030501 Sobic008G030501 Sobic003G008000--Sobic008G030501 Sobic002G070100 Sobic002G070100 Sobic003G008000--Sobic002G070100 Sobic001G240700 Sobic001G240700 Sobic003G008000--Sobic001G240700 Sobic001G253750 Sobic001G253750 Sobic003G008000--Sobic001G253750 Sobic003G212000--Sobic003G234500 Sobic003G212000--Sobic008G071300 Sobic003G212000--Sobic002G113200 Sobic006G267100 Sobic006G267100 Sobic003G212000--Sobic006G267100 Sobic009G189700 Sobic009G189700 Sobic003G212000--Sobic009G189700 Sobic005G144000 Sobic005G144000 Sobic003G212000--Sobic005G144000 Sobic001G503600 Sobic001G503600 Sobic003G212000--Sobic001G503600 Sobic002G389600 Sobic002G389600 Sobic003G212000--Sobic002G389600 Sobic002G170100 Sobic002G170100 Sobic003G212000--Sobic002G170100 Sobic003G234500--Sobic003G212000 Sobic003G234500--Sobic008G071300 Sobic003G234500--Sobic006G267100 Sobic003G234500--Sobic005G144000 Sobic003G234500--Sobic002G170100 Sobic003G234500--Sobic009G189700 Sobic004G180100 Sobic004G180100 Sobic003G234500--Sobic004G180100 Sobic008G122800 Sobic008G122800 Sobic003G234500--Sobic008G122800 Sobic003G110932 Sobic003G110932 Sobic003G234500--Sobic003G110932 Sobic007G092400 Sobic007G092400 Sobic003G410300--Sobic007G092400 Sobic009G085300 Sobic009G085300 Sobic003G410300--Sobic009G085300 Sobic003G410300--Sobic009G044700 Sobic003G410300--Sobic002G034750 Sobic003G410300--Sobic003G008000 Sobic003G410300--Sobic010G104600 Sobic001G453600 Sobic001G453600 Sobic003G410300--Sobic001G453600 Sobic003G410300--Sobic002G243300 Sobic004G135366 Sobic004G135366 Sobic003G410300--Sobic004G135366
Octagon: transcription factors


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