Gene annotation
Transcriptome id Sobic.003G032400.1
Synonym
Functional annotation -
UniProt A0A1B6Q112
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.003G032400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G095000 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
2 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.010G071100 expressed protein -
4 Sobic.007G076400 expressed protein -
5 Sobic.009G140900 expressed protein -
6 Sobic.001G237600 transcription factor Dp, putative, expressed K04683: transcription factor Dp-1
7 Sobic.004G054700 expressed protein K10745: ribonuclease H2 subunit C
8 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
9 Sobic.007G032000 tryptophan synthase beta chain 1, putative, expressed K01696: tryptophan synthase beta chain
10 Sobic.006G158332 - -
11 Sobic.008G116700 expressed protein -
12 Sobic.001G464400 expressed protein -
13 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
14 Sobic.008G087900 expressed protein -
15 Sobic.003G235100 HD domain containing protein 2, putative, expressed K07023: putative hydrolases of HD superfamily
16 Sobic.007G069600 bromodomain containing protein, expressed -
17 Sobic.004G252900 transcription factor IIA large subunit, putative, expressed K03122: TFIIA1, GTF2A1, transcription initiation factor TFIIA large subunit
18 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
19 Sobic.004G172500 expressed protein -
20 Sobic.007G022600 adenylate kinase, putative, expressed K00939: adk, adenylate kinase


Gene co-expression network
sample Sobic003G032400 Sobic003G032400 Sobic001G095000 Sobic001G095000 Sobic003G032400--Sobic001G095000 Sobic003G202600 Sobic003G202600 Sobic003G032400--Sobic003G202600 Sobic010G071100 Sobic010G071100 Sobic003G032400--Sobic010G071100 Sobic007G076400 Sobic007G076400 Sobic003G032400--Sobic007G076400 Sobic009G140900 Sobic009G140900 Sobic003G032400--Sobic009G140900 Sobic001G237600 Sobic001G237600 Sobic003G032400--Sobic001G237600 Sobic004G054700 Sobic004G054700 Sobic003G032400--Sobic004G054700 Sobic007G087000 Sobic007G087000 Sobic003G032400--Sobic007G087000 Sobic007G032000 Sobic007G032000 Sobic003G032400--Sobic007G032000 Sobic001G095000--Sobic003G202600 Sobic001G095000--Sobic007G087000 Sobic001G095000--Sobic001G237600 Sobic002G079000 Sobic002G079000 Sobic001G095000--Sobic002G079000 Sobic001G095000--Sobic007G032000 Sobic003G302200 Sobic003G302200 Sobic001G095000--Sobic003G302200 Sobic001G095000--Sobic007G076400 Sobic001G188400 Sobic001G188400 Sobic001G095000--Sobic001G188400 Sobic008G116700 Sobic008G116700 Sobic001G095000--Sobic008G116700 Sobic003G202600--Sobic001G095000 Sobic003G202600--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic003G202600--Sobic002G355800 Sobic003G202600--Sobic007G087000 Sobic003G202600--Sobic001G237600 Sobic010G169900 Sobic010G169900 Sobic003G202600--Sobic010G169900 Sobic001G389200 Sobic001G389200 Sobic003G202600--Sobic001G389200 Sobic006G060000 Sobic006G060000 Sobic003G202600--Sobic006G060000 Sobic003G202600--Sobic003G302200 Sobic010G071100--Sobic008G116700 Sobic004G172500 Sobic004G172500 Sobic010G071100--Sobic004G172500 Sobic010G071100--Sobic007G087000 Sobic010G071100--Sobic001G095000 Sobic004G198600 Sobic004G198600 Sobic010G071100--Sobic004G198600 Sobic010G071100--Sobic001G237600 Sobic009G107300 Sobic009G107300 Sobic010G071100--Sobic009G107300 Sobic010G186100 Sobic010G186100 Sobic010G071100--Sobic010G186100 Sobic010G071100--Sobic003G032400 Sobic002G084800 Sobic002G084800 Sobic007G076400--Sobic002G084800 Sobic002G200000 Sobic002G200000 Sobic007G076400--Sobic002G200000 Sobic007G076400--Sobic007G087000 Sobic007G076400--Sobic002G079000 Sobic007G076400--Sobic008G116700 Sobic006G250800 Sobic006G250800 Sobic007G076400--Sobic006G250800 Sobic007G076400--Sobic006G060000 Sobic007G076400--Sobic001G188400 Sobic006G115100 Sobic006G115100 Sobic007G076400--Sobic006G115100 Sobic009G140900--Sobic003G032400 Sobic006G158332 Sobic006G158332 Sobic009G140900--Sobic006G158332 Sobic001G464400 Sobic001G464400 Sobic009G140900--Sobic001G464400 Sobic006G203600 Sobic006G203600 Sobic009G140900--Sobic006G203600 Sobic009G140900--Sobic001G095000 Sobic001G025700 Sobic001G025700 Sobic009G140900--Sobic001G025700 Sobic008G111800 Sobic008G111800 Sobic009G140900--Sobic008G111800 Sobic009G140900--Sobic007G032000 Sobic010G225201 Sobic010G225201 Sobic009G140900--Sobic010G225201 Sobic003G363700 Sobic003G363700 Sobic001G237600--Sobic003G363700 Sobic004G320700 Sobic004G320700 Sobic001G237600--Sobic004G320700 Sobic001G237600--Sobic002G079000 Sobic001G237600--Sobic007G087000 Sobic006G039400 Sobic006G039400 Sobic001G237600--Sobic006G039400 Sobic001G237600--Sobic003G202600 Sobic010G244900 Sobic010G244900 Sobic001G237600--Sobic010G244900 Sobic001G237600--Sobic001G095000 Sobic002G292900 Sobic002G292900 Sobic001G237600--Sobic002G292900 Sobic001G485300 Sobic001G485300 Sobic004G054700--Sobic001G485300 Sobic001G008100 Sobic001G008100 Sobic004G054700--Sobic001G008100 Sobic009G209900 Sobic009G209900 Sobic004G054700--Sobic009G209900 Sobic006G041800 Sobic006G041800 Sobic004G054700--Sobic006G041800 Sobic002G276800 Sobic002G276800 Sobic004G054700--Sobic002G276800 Sobic003G085500 Sobic003G085500 Sobic004G054700--Sobic003G085500 Sobic003G395300 Sobic003G395300 Sobic004G054700--Sobic003G395300 Sobic001G050400 Sobic001G050400 Sobic004G054700--Sobic001G050400 Sobic001G061200 Sobic001G061200 Sobic004G054700--Sobic001G061200 Sobic007G087000--Sobic002G079000 Sobic007G087000--Sobic007G076400 Sobic002G306100 Sobic002G306100 Sobic007G087000--Sobic002G306100 Sobic007G087000--Sobic008G116700 Sobic007G087000--Sobic006G250800 Sobic001G014200 Sobic001G014200 Sobic007G087000--Sobic001G014200 Sobic007G087000--Sobic001G237600 Sobic007G172700 Sobic007G172700 Sobic007G087000--Sobic007G172700 Sobic007G087000--Sobic009G107300 Sobic003G302300 Sobic003G302300 Sobic007G032000--Sobic003G302300 Sobic007G032000--Sobic001G095000 Sobic007G032000--Sobic008G116700 Sobic006G109100 Sobic006G109100 Sobic007G032000--Sobic006G109100 Sobic004G302800 Sobic004G302800 Sobic007G032000--Sobic004G302800 Sobic009G186700 Sobic009G186700 Sobic007G032000--Sobic009G186700 Sobic005G145201 Sobic005G145201 Sobic007G032000--Sobic005G145201 Sobic008G013200 Sobic008G013200 Sobic007G032000--Sobic008G013200 Sobic003G198900 Sobic003G198900 Sobic007G032000--Sobic003G198900
Octagon: transcription factors


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