Gene annotation
Transcriptome id Sobic.006G158332.1
Synonym -
Functional annotation -
UniProt A0A1Z5RE80
Pfam -
Panther DB PTHR24322 PTHR24322:SF632
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G24190 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os04g44920.1 : oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a056578
Brachypodium -
Barley -
Wheat TraesCS2A02G371500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G041800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
2 Sobic.001G332300 expressed protein -
3 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
4 Sobic.009G216700 WD domain, G-beta repeat domain containing protein, expressed K14962: WDR82, SWD2, COMPASS component SWD2
5 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
6 Sobic.001G304000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
7 Sobic.001G008100 expressed protein K17966: transmembrane protein 70, mitochondrial
8 Sobic.003G102600 K-dependent Na/Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K13754: SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
9 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.001G358500 GA20734-PA, putative, expressed -
11 Sobic.007G206300 ribosomal protein S17, putative, expressed K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
12 Sobic.001G464400 expressed protein -
13 Sobic.008G171400 phosphonate metabolism protein-related, putative, expressed -
14 Sobic.003G202100 Uncharacterized ACR, COG1565 containing protein, putative, expressed K18164: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
15 Sobic.009G089700 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
16 Sobic.002G185900 zinc finger protein-related, putative, expressed -
17 Sobic.009G051700 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
18 Sobic.001G178500 chloroplast 30S ribosomal protein S19, putative, expressed K02965: RP-S19, small subunit ribosomal protein S19
19 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
20 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic006G158332 Sobic006G158332 Sobic006G041800 Sobic006G041800 Sobic006G158332--Sobic006G041800 Sobic001G332300 Sobic001G332300 Sobic006G158332--Sobic001G332300 Sobic007G119600 Sobic007G119600 Sobic006G158332--Sobic007G119600 Sobic009G216700 Sobic009G216700 Sobic006G158332--Sobic009G216700 Sobic003G388700 Sobic003G388700 Sobic006G158332--Sobic003G388700 Sobic001G304000 Sobic001G304000 Sobic006G158332--Sobic001G304000 Sobic001G008100 Sobic001G008100 Sobic006G158332--Sobic001G008100 Sobic003G102600 Sobic003G102600 Sobic006G158332--Sobic003G102600 Sobic003G202600 Sobic003G202600 Sobic006G158332--Sobic003G202600 Sobic006G041800--Sobic007G119600 Sobic006G041800--Sobic001G008100 Sobic003G276100 Sobic003G276100 Sobic006G041800--Sobic003G276100 Sobic001G485300 Sobic001G485300 Sobic006G041800--Sobic001G485300 Sobic002G276800 Sobic002G276800 Sobic006G041800--Sobic002G276800 Sobic007G012900 Sobic007G012900 Sobic006G041800--Sobic007G012900 Sobic006G041800--Sobic003G388700 Sobic001G387800 Sobic001G387800 Sobic006G041800--Sobic001G387800 Sobic002G255400 Sobic002G255400 Sobic006G041800--Sobic002G255400 Sobic005G184200 Sobic005G184200 Sobic001G332300--Sobic005G184200 Sobic001G378200 Sobic001G378200 Sobic001G332300--Sobic001G378200 Sobic004G025300 Sobic004G025300 Sobic001G332300--Sobic004G025300 Sobic001G112400 Sobic001G112400 Sobic001G332300--Sobic001G112400 Sobic001G404200 Sobic001G404200 Sobic001G332300--Sobic001G404200 Sobic001G358500 Sobic001G358500 Sobic001G332300--Sobic001G358500 Sobic006G083100 Sobic006G083100 Sobic001G332300--Sobic006G083100 Sobic003G374000 Sobic003G374000 Sobic001G332300--Sobic003G374000 Sobic002G136400 Sobic002G136400 Sobic001G332300--Sobic002G136400 Sobic009G224400 Sobic009G224400 Sobic007G119600--Sobic009G224400 Sobic009G191400 Sobic009G191400 Sobic007G119600--Sobic009G191400 Sobic007G119600--Sobic006G041800 Sobic001G457000 Sobic001G457000 Sobic007G119600--Sobic001G457000 Sobic001G073600 Sobic001G073600 Sobic007G119600--Sobic001G073600 Sobic007G119600--Sobic002G255400 Sobic003G028200 Sobic003G028200 Sobic007G119600--Sobic003G028200 Sobic007G119600--Sobic003G388700 Sobic003G260600 Sobic003G260600 Sobic007G119600--Sobic003G260600 Sobic009G216700--Sobic006G041800 Sobic009G216700--Sobic003G388700 Sobic009G216700--Sobic007G012900 Sobic009G216700--Sobic001G008100 Sobic003G395300 Sobic003G395300 Sobic009G216700--Sobic003G395300 Sobic006G095200 Sobic006G095200 Sobic009G216700--Sobic006G095200 Sobic010G002800 Sobic010G002800 Sobic009G216700--Sobic010G002800 Sobic009G216700--Sobic009G191400 Sobic007G206300 Sobic007G206300 Sobic009G216700--Sobic007G206300 Sobic003G388700--Sobic007G119600 Sobic003G388700--Sobic001G073600 Sobic003G135600 Sobic003G135600 Sobic003G388700--Sobic003G135600 Sobic003G388700--Sobic009G191400 Sobic002G079700 Sobic002G079700 Sobic003G388700--Sobic002G079700 Sobic001G473400 Sobic001G473400 Sobic003G388700--Sobic001G473400 Sobic003G388700--Sobic010G002800 Sobic010G258000 Sobic010G258000 Sobic003G388700--Sobic010G258000 Sobic003G388700--Sobic006G041800 Sobic003G202100 Sobic003G202100 Sobic001G304000--Sobic003G202100 Sobic008G171400 Sobic008G171400 Sobic001G304000--Sobic008G171400 Sobic005G018800 Sobic005G018800 Sobic001G304000--Sobic005G018800 Sobic002G071100 Sobic002G071100 Sobic001G304000--Sobic002G071100 Sobic003G388900 Sobic003G388900 Sobic001G304000--Sobic003G388900 Sobic006G020900 Sobic006G020900 Sobic001G304000--Sobic006G020900 Sobic001G178500 Sobic001G178500 Sobic001G304000--Sobic001G178500 Sobic001G304000--Sobic007G206300 Sobic008G168200 Sobic008G168200 Sobic001G304000--Sobic008G168200 Sobic004G039400 Sobic004G039400 Sobic001G008100--Sobic004G039400 Sobic001G008100--Sobic006G041800 Sobic001G465400 Sobic001G465400 Sobic001G008100--Sobic001G465400 Sobic010G040900 Sobic010G040900 Sobic001G008100--Sobic010G040900 Sobic001G008100--Sobic001G387800 Sobic001G008100--Sobic003G276100 Sobic001G008100--Sobic002G079700 Sobic001G008100--Sobic009G191400 Sobic001G008100--Sobic002G276800 Sobic007G014900 Sobic007G014900 Sobic003G102600--Sobic007G014900 Sobic003G102600--Sobic001G378200 Sobic006G109700 Sobic006G109700 Sobic003G102600--Sobic006G109700 Sobic006G029000 Sobic006G029000 Sobic003G102600--Sobic006G029000 Sobic003G102600--Sobic001G332300 Sobic009G051700 Sobic009G051700 Sobic003G102600--Sobic009G051700 Sobic009G174000 Sobic009G174000 Sobic003G102600--Sobic009G174000 Sobic001G444300 Sobic001G444300 Sobic003G102600--Sobic001G444300 Sobic003G127300 Sobic003G127300 Sobic003G102600--Sobic003G127300 Sobic001G095000 Sobic001G095000 Sobic003G202600--Sobic001G095000 Sobic002G079000 Sobic002G079000 Sobic003G202600--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic003G202600--Sobic002G355800 Sobic007G087000 Sobic007G087000 Sobic003G202600--Sobic007G087000 Sobic001G237600 Sobic001G237600 Sobic003G202600--Sobic001G237600 Sobic010G169900 Sobic010G169900 Sobic003G202600--Sobic010G169900 Sobic001G389200 Sobic001G389200 Sobic003G202600--Sobic001G389200 Sobic006G060000 Sobic006G060000 Sobic003G202600--Sobic006G060000 Sobic003G302200 Sobic003G302200 Sobic003G202600--Sobic003G302200
Octagon: transcription factors


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