Gene annotation
Transcriptome id Sobic.007G069600.3,Sobic.007G069600.1,Sobic.007G069600.2
Synonym GTE7, Sb07g005500
Functional annotation bromodomain containing protein, expressed
UniProt A0A1B6PG63 , A0A1B6PG59 , A0A1B6PG56
Pfam PF00439 PF17035
Panther DB PTHR22880 PTHR22880:SF162
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G65630 : global transcription factor group E7
RAP-DB (Rice) LOC_Os08g09340.1 : bromodomain containing protein, expressed
MaizeGDB (Corn) Zm00025a054815 , Zm00025a029951
Brachypodium KQJ95056
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G288000 ankyrin repeat domain containing protein, putative, expressed -
2 Sobic.006G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule associated protein, putative, expressed -
3 Sobic.003G032400 - -
4 Sobic.004G054700 expressed protein K10745: ribonuclease H2 subunit C
5 Sobic.002G374200 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
6 Sobic.004G337300 expressed protein -
7 Sobic.003G122400 expressed protein -
8 Sobic.007G081900 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
9 Sobic.010G041100 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
10 Sobic.001G152700 expressed protein -
11 Sobic.001G500500 expressed protein -
12 Sobic.009G218000 VIP1 protein, putative, expressed -
13 Sobic.006G219000 OsFBW1 - F-box domain and WD40 repeat containing protein, expressed -
14 Sobic.003G006200 ubiquitin-conjugating enzyme E2, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
15 Sobic.001G432100 expressed protein -
16 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
17 Sobic.005G213300 expressed protein -
18 Sobic.003G396500 ZOS5-12 - C2H2 zinc finger protein, expressed -
19 Sobic.003G091300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
20 Sobic.003G090000 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1


Gene co-expression network
sample Sobic007G069600 Sobic007G069600 Sobic001G288000 Sobic001G288000 Sobic007G069600--Sobic001G288000 Sobic006G215800 Sobic006G215800 Sobic007G069600--Sobic006G215800 Sobic003G032400 Sobic003G032400 Sobic007G069600--Sobic003G032400 Sobic004G054700 Sobic004G054700 Sobic007G069600--Sobic004G054700 Sobic002G374200 Sobic002G374200 Sobic007G069600--Sobic002G374200 Sobic004G337300 Sobic004G337300 Sobic007G069600--Sobic004G337300 Sobic003G122400 Sobic003G122400 Sobic007G069600--Sobic003G122400 Sobic007G081900 Sobic007G081900 Sobic007G069600--Sobic007G081900 Sobic010G041100 Sobic010G041100 Sobic007G069600--Sobic010G041100 Sobic001G137400 Sobic001G137400 Sobic001G288000--Sobic001G137400 Sobic001G137500 Sobic001G137500 Sobic001G288000--Sobic001G137500 Sobic003G091300 Sobic003G091300 Sobic001G288000--Sobic003G091300 Sobic002G258000 Sobic002G258000 Sobic001G288000--Sobic002G258000 Sobic007G193300 Sobic007G193300 Sobic001G288000--Sobic007G193300 Sobic002G299200 Sobic002G299200 Sobic001G288000--Sobic002G299200 Sobic003G006000 Sobic003G006000 Sobic001G288000--Sobic003G006000 Sobic002G178700 Sobic002G178700 Sobic001G288000--Sobic002G178700 Sobic001G419500 Sobic001G419500 Sobic001G288000--Sobic001G419500 Sobic003G090000 Sobic003G090000 Sobic006G215800--Sobic003G090000 Sobic003G027000 Sobic003G027000 Sobic006G215800--Sobic003G027000 Sobic001G218600 Sobic001G218600 Sobic006G215800--Sobic001G218600 Sobic004G313400 Sobic004G313400 Sobic006G215800--Sobic004G313400 Sobic003G396500 Sobic003G396500 Sobic006G215800--Sobic003G396500 Sobic006G215800--Sobic002G299200 Sobic008G098700 Sobic008G098700 Sobic006G215800--Sobic008G098700 Sobic007G060100 Sobic007G060100 Sobic006G215800--Sobic007G060100 Sobic005G070301 Sobic005G070301 Sobic006G215800--Sobic005G070301 Sobic001G095000 Sobic001G095000 Sobic003G032400--Sobic001G095000 Sobic003G202600 Sobic003G202600 Sobic003G032400--Sobic003G202600 Sobic010G071100 Sobic010G071100 Sobic003G032400--Sobic010G071100 Sobic007G076400 Sobic007G076400 Sobic003G032400--Sobic007G076400 Sobic009G140900 Sobic009G140900 Sobic003G032400--Sobic009G140900 Sobic001G237600 Sobic001G237600 Sobic003G032400--Sobic001G237600 Sobic003G032400--Sobic004G054700 Sobic007G087000 Sobic007G087000 Sobic003G032400--Sobic007G087000 Sobic007G032000 Sobic007G032000 Sobic003G032400--Sobic007G032000 Sobic001G485300 Sobic001G485300 Sobic004G054700--Sobic001G485300 Sobic001G008100 Sobic001G008100 Sobic004G054700--Sobic001G008100 Sobic009G209900 Sobic009G209900 Sobic004G054700--Sobic009G209900 Sobic006G041800 Sobic006G041800 Sobic004G054700--Sobic006G041800 Sobic002G276800 Sobic002G276800 Sobic004G054700--Sobic002G276800 Sobic003G085500 Sobic003G085500 Sobic004G054700--Sobic003G085500 Sobic003G395300 Sobic003G395300 Sobic004G054700--Sobic003G395300 Sobic001G050400 Sobic001G050400 Sobic004G054700--Sobic001G050400 Sobic001G061200 Sobic001G061200 Sobic004G054700--Sobic001G061200 Sobic010G212700 Sobic010G212700 Sobic002G374200--Sobic010G212700 Sobic001G500500 Sobic001G500500 Sobic002G374200--Sobic001G500500 Sobic010G237800 Sobic010G237800 Sobic002G374200--Sobic010G237800 Sobic003G007200 Sobic003G007200 Sobic002G374200--Sobic003G007200 Sobic007G153700 Sobic007G153700 Sobic002G374200--Sobic007G153700 Sobic005G160200 Sobic005G160200 Sobic002G374200--Sobic005G160200 Sobic009G232500 Sobic009G232500 Sobic002G374200--Sobic009G232500 Sobic003G410200 Sobic003G410200 Sobic002G374200--Sobic003G410200 Sobic002G196500 Sobic002G196500 Sobic002G374200--Sobic002G196500 Sobic002G357900 Sobic002G357900 Sobic004G337300--Sobic002G357900 Sobic004G337300--Sobic001G050400 Sobic004G337300--Sobic001G061200 Sobic003G190600 Sobic003G190600 Sobic004G337300--Sobic003G190600 Sobic008G140400 Sobic008G140400 Sobic004G337300--Sobic008G140400 Sobic002G401700 Sobic002G401700 Sobic004G337300--Sobic002G401700 Sobic003G006200 Sobic003G006200 Sobic004G337300--Sobic003G006200 Sobic002G267400 Sobic002G267400 Sobic004G337300--Sobic002G267400 Sobic001G005600 Sobic001G005600 Sobic004G337300--Sobic001G005600 Sobic003G122400--Sobic004G337300 Sobic004G207900 Sobic004G207900 Sobic003G122400--Sobic004G207900 Sobic010G248000 Sobic010G248000 Sobic003G122400--Sobic010G248000 Sobic006G087400 Sobic006G087400 Sobic003G122400--Sobic006G087400 Sobic002G159800 Sobic002G159800 Sobic003G122400--Sobic002G159800 Sobic002G294100 Sobic002G294100 Sobic003G122400--Sobic002G294100 Sobic002G422400 Sobic002G422400 Sobic003G122400--Sobic002G422400 Sobic003G122400--Sobic002G357900 Sobic003G182300 Sobic003G182300 Sobic003G122400--Sobic003G182300 Sobic007G081900--Sobic003G006200 Sobic007G081900--Sobic002G267400 Sobic010G235700 Sobic010G235700 Sobic007G081900--Sobic010G235700 Sobic004G207100 Sobic004G207100 Sobic007G081900--Sobic004G207100 Sobic004G320100 Sobic004G320100 Sobic007G081900--Sobic004G320100 Sobic007G081900--Sobic002G374200 Sobic003G004600 Sobic003G004600 Sobic007G081900--Sobic003G004600 Sobic010G154000 Sobic010G154000 Sobic007G081900--Sobic010G154000 Sobic008G160500 Sobic008G160500 Sobic007G081900--Sobic008G160500 Sobic001G229300 Sobic001G229300 Sobic010G041100--Sobic001G229300 Sobic007G010200 Sobic007G010200 Sobic010G041100--Sobic007G010200 Sobic004G354100 Sobic004G354100 Sobic010G041100--Sobic004G354100 Sobic004G277400 Sobic004G277400 Sobic010G041100--Sobic004G277400 Sobic010G041100--Sobic008G098700 Sobic002G322400 Sobic002G322400 Sobic010G041100--Sobic002G322400 Sobic003G343200 Sobic003G343200 Sobic010G041100--Sobic003G343200 Sobic002G239400 Sobic002G239400 Sobic010G041100--Sobic002G239400 Sobic004G151200 Sobic004G151200 Sobic010G041100--Sobic004G151200
Octagon: transcription factors


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