Gene annotation
Transcriptome id Sobic.003G145100.2
Synonym MYB12, PFG1, Sb03g012550, ATMYB12
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1W0VXD0
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF651
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47460 : myb domain protein 12
RAP-DB (Rice) LOC_Os01g19970.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a046903 , Zm00025a024299 , Zm00025a036074
Brachypodium PNT70429 , KQJ89177 , KQK04099
Barley HORVU4Hr1G018360.2 , HORVU4Hr1G018360.6 , HORVU4Hr1G018360.7 , HORVU4Hr1G018360.5 , HORVU4Hr1G018360.8 , HORVU4Hr1G018360.9 , HORVU2Hr1G091590.1 , HORVU2Hr1G091590.2 , HORVU2Hr1G091590.3 , HORVU2Hr1G091590.4 , HORVU2Hr1G091590.5
Wheat TraesCS4B02G096500 , TraesCS2B02G387700 , TraesCS2A02G370300 , TraesCS2D02G366800 , TraesCS4A02G217800 , TraesCS2B02G387500 , TraesCS4D02G092900 , TraesCS2B02G387300 , TraesCS2A02G370400
Populus -


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cDNA sequences
Sobic.003G145100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G362800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K06940: uncharacterized protein
2 Sobic.008G131200 DUF538 domain containing protein, putative, expressed -
3 Sobic.004G055800 splicing factor, arginine/serine-rich 12, putative, expressed -
4 Sobic.006G189100 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
5 Sobic.001G527500 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.004G192700 dynein light chain type 1 family protein, putative, expressed K10418: dynein light chain LC8-type
7 Sobic.010G189800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
8 Sobic.010G191100 helix-loop-helix DNA-binding, putative, expressed -
9 Sobic.002G408500 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
10 Sobic.006G139600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
11 Sobic.008G137500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.002G416000 pectinesterase, putative, expressed K01051: pectinesterase
13 Sobic.003G235800 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
14 Sobic.004G300500 Trihelix Family(PubMedID : 24864043)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.001G429100 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
16 Sobic.006G005000 expressed protein -
17 Sobic.006G259201 - -
18 Sobic.001G197500 - -
19 Sobic.003G102800 ZOS1-01 - C2H2 zinc finger protein, expressed -
20 Sobic.003G013100 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic003G145100 Sobic003G145100 Sobic001G362800 Sobic001G362800 Sobic003G145100--Sobic001G362800 Sobic008G131200 Sobic008G131200 Sobic003G145100--Sobic008G131200 Sobic004G055800 Sobic004G055800 Sobic003G145100--Sobic004G055800 Sobic006G189100 Sobic006G189100 Sobic003G145100--Sobic006G189100 Sobic001G527500 Sobic001G527500 Sobic003G145100--Sobic001G527500 Sobic004G192700 Sobic004G192700 Sobic003G145100--Sobic004G192700 Sobic010G189800 Sobic010G189800 Sobic003G145100--Sobic010G189800 Sobic010G191100 Sobic010G191100 Sobic003G145100--Sobic010G191100 Sobic002G408500 Sobic002G408500 Sobic003G145100--Sobic002G408500 Sobic006G053000 Sobic006G053000 Sobic001G362800--Sobic006G053000 Sobic003G230300 Sobic003G230300 Sobic001G362800--Sobic003G230300 Sobic001G362800--Sobic010G189800 Sobic004G300500 Sobic004G300500 Sobic001G362800--Sobic004G300500 Sobic001G362800--Sobic004G192700 Sobic010G073300 Sobic010G073300 Sobic001G362800--Sobic010G073300 Sobic002G263900 Sobic002G263900 Sobic001G362800--Sobic002G263900 SobicK044200 SobicK044200 Sobic001G362800--SobicK044200 Sobic001G429100 Sobic001G429100 Sobic001G362800--Sobic001G429100 Sobic001G115800 Sobic001G115800 Sobic008G131200--Sobic001G115800 Sobic004G297800 Sobic004G297800 Sobic008G131200--Sobic004G297800 Sobic008G139900 Sobic008G139900 Sobic008G131200--Sobic008G139900 Sobic004G072000 Sobic004G072000 Sobic008G131200--Sobic004G072000 Sobic010G258700 Sobic010G258700 Sobic008G131200--Sobic010G258700 Sobic006G247500 Sobic006G247500 Sobic008G131200--Sobic006G247500 Sobic004G066300 Sobic004G066300 Sobic008G131200--Sobic004G066300 Sobic006G079100 Sobic006G079100 Sobic008G131200--Sobic006G079100 Sobic003G013100 Sobic003G013100 Sobic008G131200--Sobic003G013100 Sobic002G140100 Sobic002G140100 Sobic004G055800--Sobic002G140100 Sobic001G220200 Sobic001G220200 Sobic004G055800--Sobic001G220200 Sobic001G197500 Sobic001G197500 Sobic004G055800--Sobic001G197500 Sobic006G005000 Sobic006G005000 Sobic004G055800--Sobic006G005000 Sobic006G227800 Sobic006G227800 Sobic004G055800--Sobic006G227800 Sobic006G259201 Sobic006G259201 Sobic004G055800--Sobic006G259201 Sobic007G224600 Sobic007G224600 Sobic004G055800--Sobic007G224600 Sobic001G519300 Sobic001G519300 Sobic004G055800--Sobic001G519300 Sobic010G096801 Sobic010G096801 Sobic004G055800--Sobic010G096801 Sobic001G223400 Sobic001G223400 Sobic006G189100--Sobic001G223400 Sobic004G344301 Sobic004G344301 Sobic006G189100--Sobic004G344301 Sobic006G065700 Sobic006G065700 Sobic006G189100--Sobic006G065700 Sobic003G235800 Sobic003G235800 Sobic006G189100--Sobic003G235800 Sobic004G357033 Sobic004G357033 Sobic006G189100--Sobic004G357033 Sobic004G082151 Sobic004G082151 Sobic006G189100--Sobic004G082151 Sobic010G074980 Sobic010G074980 Sobic006G189100--Sobic010G074980 Sobic006G189100--Sobic006G227800 Sobic007G221800 Sobic007G221800 Sobic006G189100--Sobic007G221800 Sobic001G527500--Sobic006G227800 Sobic010G206700 Sobic010G206700 Sobic001G527500--Sobic010G206700 Sobic001G527500--Sobic002G140100 Sobic005G232200 Sobic005G232200 Sobic001G527500--Sobic005G232200 Sobic001G139600 Sobic001G139600 Sobic001G527500--Sobic001G139600 Sobic003G178200 Sobic003G178200 Sobic001G527500--Sobic003G178200 Sobic003G245700 Sobic003G245700 Sobic001G527500--Sobic003G245700 Sobic005G022400 Sobic005G022400 Sobic001G527500--Sobic005G022400 Sobic004G199000 Sobic004G199000 Sobic001G527500--Sobic004G199000 Sobic004G265400 Sobic004G265400 Sobic004G192700--Sobic004G265400 Sobic003G067500 Sobic003G067500 Sobic004G192700--Sobic003G067500 Sobic007G149600 Sobic007G149600 Sobic004G192700--Sobic007G149600 Sobic003G200501 Sobic003G200501 Sobic004G192700--Sobic003G200501 Sobic002G210200 Sobic002G210200 Sobic004G192700--Sobic002G210200 Sobic004G192700--Sobic007G221800 Sobic004G192700--Sobic010G073300 Sobic003G067300 Sobic003G067300 Sobic004G192700--Sobic003G067300 Sobic002G284901 Sobic002G284901 Sobic004G192700--Sobic002G284901 Sobic007G081300 Sobic007G081300 Sobic010G189800--Sobic007G081300 Sobic010G189800--Sobic004G192700 Sobic003G092200 Sobic003G092200 Sobic010G189800--Sobic003G092200 Sobic006G187600 Sobic006G187600 Sobic010G189800--Sobic006G187600 Sobic010G189800--Sobic010G073300 Sobic010G189800--Sobic007G149600 Sobic004G227000 Sobic004G227000 Sobic010G189800--Sobic004G227000 Sobic003G301200 Sobic003G301200 Sobic010G189800--Sobic003G301200 Sobic001G441800 Sobic001G441800 Sobic010G189800--Sobic001G441800 Sobic008G137500 Sobic008G137500 Sobic010G191100--Sobic008G137500 Sobic004G155900 Sobic004G155900 Sobic010G191100--Sobic004G155900 Sobic009G070500 Sobic009G070500 Sobic010G191100--Sobic009G070500 Sobic002G154300 Sobic002G154300 Sobic010G191100--Sobic002G154300 Sobic006G163600 Sobic006G163600 Sobic010G191100--Sobic006G163600 Sobic010G246500 Sobic010G246500 Sobic010G191100--Sobic010G246500 Sobic010G191100--Sobic003G301200 Sobic002G229800 Sobic002G229800 Sobic010G191100--Sobic002G229800 Sobic001G273100 Sobic001G273100 Sobic010G191100--Sobic001G273100 Sobic002G408500--Sobic008G137500 Sobic005G111600 Sobic005G111600 Sobic002G408500--Sobic005G111600 Sobic009G229100 Sobic009G229100 Sobic002G408500--Sobic009G229100 Sobic002G408500--Sobic002G154300 Sobic003G364700 Sobic003G364700 Sobic002G408500--Sobic003G364700 Sobic002G408500--Sobic010G191100 Sobic002G206400 Sobic002G206400 Sobic002G408500--Sobic002G206400 Sobic002G025300 Sobic002G025300 Sobic002G408500--Sobic002G025300 Sobic010G271000 Sobic010G271000 Sobic002G408500--Sobic010G271000
Octagon: transcription factors


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