Gene annotation
Transcriptome id Sobic.003G249000.1
Synonym Sb03g030530, ATLPP2, ATPAP2, LPP2
Functional annotation lipid phosphatase protein, putative, expressed
UniProt A0A1B6Q570
Pfam PF01569
Panther DB PTHR10165 PTHR10165:SF96
NCBI CDD KOG3030; Lipid phosphate phosphatase and related enzymes of the PAP2 family
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02600 : lipid phosphate phosphatase 3
RAP-DB (Rice) LOC_Os01g47580.1 : lipid phosphatase protein, putative, expressed
MaizeGDB (Corn) Zm00025a044455 , Zm00025a038877 , Zm00025a028136
Brachypodium KQK05043
Barley HORVU3Hr1G060600.3 , HORVU3Hr1G060600.2 , HORVU3Hr1G060600.7 , HORVU3Hr1G060600.6 , HORVU3Hr1G060600.9 , HORVU3Hr1G060600.22 , HORVU3Hr1G060600.23 , HORVU3Hr1G060600.15 , HORVU3Hr1G060600.14 , HORVU3Hr1G060600.17 , HORVU3Hr1G060600.16 , HORVU3Hr1G060600.11 , HORVU3Hr1G060600.10 , HORVU3Hr1G060600.13 , HORVU3Hr1G060600.12
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G296800 expressed protein -
2 Sobic.002G329900 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
3 Sobic.001G110000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
4 Sobic.004G055700 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
5 Sobic.007G149300 expressed protein -
6 Sobic.004G228700 expressed protein -
7 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
8 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
9 Sobic.001G055600 prenylated rab acceptor, putative, expressed -
10 Sobic.003G320800 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
12 Sobic.001G508466 - -
13 Sobic.002G348100 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
14 Sobic.005G168100 ADP-ribosylation factor, putative, expressed K07950: ADP-ribosylation factor-like protein 5B
15 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
16 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
17 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
18 Sobic.001G502900 nicotiana lesion-inducing like, putative, expressed -
19 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
20 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase


Gene co-expression network
sample Sobic003G249000 Sobic003G249000 Sobic003G296800 Sobic003G296800 Sobic003G249000--Sobic003G296800 Sobic002G329900 Sobic002G329900 Sobic003G249000--Sobic002G329900 Sobic001G110000 Sobic001G110000 Sobic003G249000--Sobic001G110000 Sobic004G055700 Sobic004G055700 Sobic003G249000--Sobic004G055700 Sobic007G149300 Sobic007G149300 Sobic003G249000--Sobic007G149300 Sobic004G228700 Sobic004G228700 Sobic003G249000--Sobic004G228700 Sobic003G160700 Sobic003G160700 Sobic003G249000--Sobic003G160700 Sobic001G047800 Sobic001G047800 Sobic003G249000--Sobic001G047800 Sobic001G055600 Sobic001G055600 Sobic003G249000--Sobic001G055600 Sobic003G296800--Sobic001G047800 Sobic003G215700 Sobic003G215700 Sobic003G296800--Sobic003G215700 Sobic002G263100 Sobic002G263100 Sobic003G296800--Sobic002G263100 Sobic002G296200 Sobic002G296200 Sobic003G296800--Sobic002G296200 Sobic004G183200 Sobic004G183200 Sobic003G296800--Sobic004G183200 Sobic001G404800 Sobic001G404800 Sobic003G296800--Sobic001G404800 Sobic006G262300 Sobic006G262300 Sobic003G296800--Sobic006G262300 Sobic002G309700 Sobic002G309700 Sobic003G296800--Sobic002G309700 Sobic004G060500 Sobic004G060500 Sobic003G296800--Sobic004G060500 Sobic002G329900--Sobic001G047800 Sobic002G329900--Sobic001G110000 Sobic002G329900--Sobic001G404800 Sobic002G329900--Sobic002G263100 Sobic002G329900--Sobic003G215700 Sobic001G197000 Sobic001G197000 Sobic002G329900--Sobic001G197000 Sobic001G519000 Sobic001G519000 Sobic002G329900--Sobic001G519000 Sobic008G006300 Sobic008G006300 Sobic002G329900--Sobic008G006300 Sobic002G348100 Sobic002G348100 Sobic002G329900--Sobic002G348100 Sobic001G110000--Sobic002G329900 Sobic004G055100 Sobic004G055100 Sobic001G110000--Sobic004G055100 Sobic001G110000--Sobic001G404800 Sobic002G246200 Sobic002G246200 Sobic001G110000--Sobic002G246200 Sobic001G110000--Sobic003G160700 Sobic001G110000--Sobic003G215700 Sobic003G209000 Sobic003G209000 Sobic001G110000--Sobic003G209000 Sobic002G418400 Sobic002G418400 Sobic001G110000--Sobic002G418400 Sobic001G110000--Sobic001G047800 Sobic005G113300 Sobic005G113300 Sobic004G055700--Sobic005G113300 Sobic004G055700--Sobic003G160700 Sobic001G361600 Sobic001G361600 Sobic004G055700--Sobic001G361600 Sobic009G188000 Sobic009G188000 Sobic004G055700--Sobic009G188000 Sobic002G090300 Sobic002G090300 Sobic004G055700--Sobic002G090300 Sobic004G055700--Sobic002G418400 Sobic010G028200 Sobic010G028200 Sobic004G055700--Sobic010G028200 Sobic004G042000 Sobic004G042000 Sobic004G055700--Sobic004G042000 Sobic004G220000 Sobic004G220000 Sobic004G055700--Sobic004G220000 Sobic001G383700 Sobic001G383700 Sobic007G149300--Sobic001G383700 Sobic001G449700 Sobic001G449700 Sobic007G149300--Sobic001G449700 Sobic003G202200 Sobic003G202200 Sobic007G149300--Sobic003G202200 Sobic010G267600 Sobic010G267600 Sobic007G149300--Sobic010G267600 Sobic009G247900 Sobic009G247900 Sobic007G149300--Sobic009G247900 Sobic004G191400 Sobic004G191400 Sobic007G149300--Sobic004G191400 Sobic003G110200 Sobic003G110200 Sobic007G149300--Sobic003G110200 Sobic001G481100 Sobic001G481100 Sobic007G149300--Sobic001G481100 Sobic009G122400 Sobic009G122400 Sobic007G149300--Sobic009G122400 Sobic001G513300 Sobic001G513300 Sobic004G228700--Sobic001G513300 Sobic002G136700 Sobic002G136700 Sobic004G228700--Sobic002G136700 Sobic004G228700--Sobic001G110000 Sobic004G259600 Sobic004G259600 Sobic004G228700--Sobic004G259600 Sobic003G273000 Sobic003G273000 Sobic004G228700--Sobic003G273000 Sobic004G259432 Sobic004G259432 Sobic004G228700--Sobic004G259432 Sobic004G228700--Sobic001G197000 Sobic002G183400 Sobic002G183400 Sobic004G228700--Sobic002G183400 Sobic004G159400 Sobic004G159400 Sobic004G228700--Sobic004G159400 Sobic003G160700--Sobic005G113300 Sobic004G041900 Sobic004G041900 Sobic003G160700--Sobic004G041900 Sobic003G125650 Sobic003G125650 Sobic003G160700--Sobic003G125650 Sobic003G078200 Sobic003G078200 Sobic003G160700--Sobic003G078200 Sobic001G475500 Sobic001G475500 Sobic003G160700--Sobic001G475500 Sobic001G502900 Sobic001G502900 Sobic003G160700--Sobic001G502900 Sobic003G160700--Sobic004G220000 Sobic003G160700--Sobic009G188000 Sobic003G436700 Sobic003G436700 Sobic003G160700--Sobic003G436700 Sobic001G047800--Sobic002G309700 Sobic001G047800--Sobic003G215700 Sobic001G047800--Sobic002G418400 Sobic004G260200 Sobic004G260200 Sobic001G047800--Sobic004G260200 Sobic001G047800--Sobic001G404800 Sobic001G047800--Sobic002G263100 Sobic001G047800--Sobic004G060500 Sobic007G134900 Sobic007G134900 Sobic001G047800--Sobic007G134900 Sobic001G047800--Sobic001G519000 Sobic001G390300 Sobic001G390300 Sobic001G055600--Sobic001G390300 Sobic007G074000 Sobic007G074000 Sobic001G055600--Sobic007G074000 Sobic002G407900 Sobic002G407900 Sobic001G055600--Sobic002G407900 Sobic009G159400 Sobic009G159400 Sobic001G055600--Sobic009G159400 Sobic001G055600--Sobic001G481100 Sobic004G065500 Sobic004G065500 Sobic001G055600--Sobic004G065500 Sobic002G336600 Sobic002G336600 Sobic001G055600--Sobic002G336600 Sobic003G228900 Sobic003G228900 Sobic001G055600--Sobic003G228900 Sobic001G055600--Sobic009G247900
Octagon: transcription factors


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