Gene annotation
Transcriptome id Sobic.003G306300.3,Sobic.003G306300.2,Sobic.003G306300.4
Synonym Sb03g035480
Functional annotation amino acid kinase, putative, expressed
UniProt A0A1W0VZQ0 , A0A1B6Q699 , A0A1W0VZQ8
Pfam PF00696
Panther DB PTHR11063 PTHR11063:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G26640 : Amino acid kinase family protein
RAP-DB (Rice) LOC_Os01g55890.1 : amino acid kinase, putative, expressed
MaizeGDB (Corn) Zm00025a032709 , Zm00025a039948
Brachypodium KQK09894
Barley -
Wheat TraesCS3A02G301500 , TraesCS3A02G301500 , TraesCS3B02G335100 , TraesCS3B02G335100 , TraesCS3B02G335100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G186900 - K12812: DDX39B, UAP56, ATP-dependent RNA helicase UAP56/SUB2
2 Sobic.002G230600 glucose-6-phosphate isomerase, putative, expressed K01810: GPI, glucose-6-phosphate isomerase
3 Sobic.010G171600 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04733: interleukin-1 receptor-associated kinase 4
4 Sobic.003G404300 expressed protein K11368: ENY2, DC6, enhancer of yellow 2 transcription factor
5 Sobic.008G037800 ACT domain containing protein, expressed -
6 Sobic.008G116000 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
7 Sobic.001G049500 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
8 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
9 Sobic.004G097200 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
10 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
11 Sobic.008G006200 macrophage migration inhibitory factor, putative, expressed -
12 Sobic.004G324100 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
13 Sobic.001G411400 response regulator receiver domain containing protein, expressed K12129: pseudo-response regulator 7
14 Sobic.007G125500 expressed protein -
15 Sobic.001G436400 immature colon carcinoma transcript 1 protein precursor, putative, expressed K15033: peptidyl-tRNA hydrolase ICT1
16 Sobic.005G061801 - -
17 Sobic.001G261545 - K01669: deoxyribodipyrimidine photo-lyase
18 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
19 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
20 Sobic.004G210500 outer envelope protein, putative, expressed -


Gene co-expression network
sample Sobic003G306300 Sobic003G306300 Sobic003G186900 Sobic003G186900 Sobic003G306300--Sobic003G186900 Sobic002G230600 Sobic002G230600 Sobic003G306300--Sobic002G230600 Sobic010G171600 Sobic010G171600 Sobic003G306300--Sobic010G171600 Sobic003G404300 Sobic003G404300 Sobic003G306300--Sobic003G404300 Sobic008G037800 Sobic008G037800 Sobic003G306300--Sobic008G037800 Sobic008G116000 Sobic008G116000 Sobic003G306300--Sobic008G116000 Sobic001G049500 Sobic001G049500 Sobic003G306300--Sobic001G049500 Sobic002G072400 Sobic002G072400 Sobic003G306300--Sobic002G072400 Sobic004G097200 Sobic004G097200 Sobic003G306300--Sobic004G097200 Sobic003G166200 Sobic003G166200 Sobic003G186900--Sobic003G166200 Sobic003G264800 Sobic003G264800 Sobic003G186900--Sobic003G264800 Sobic005G106600 Sobic005G106600 Sobic003G186900--Sobic005G106600 Sobic006G219600 Sobic006G219600 Sobic003G186900--Sobic006G219600 Sobic003G186900--Sobic002G072400 Sobic004G337400 Sobic004G337400 Sobic003G186900--Sobic004G337400 Sobic003G186900--Sobic010G171600 Sobic001G333800 Sobic001G333800 Sobic003G186900--Sobic001G333800 Sobic001G207800 Sobic001G207800 Sobic003G186900--Sobic001G207800 Sobic010G062500 Sobic010G062500 Sobic002G230600--Sobic010G062500 Sobic004G113100 Sobic004G113100 Sobic002G230600--Sobic004G113100 Sobic002G230600--Sobic008G037800 Sobic001G167900 Sobic001G167900 Sobic002G230600--Sobic001G167900 Sobic004G124400 Sobic004G124400 Sobic002G230600--Sobic004G124400 Sobic004G154800 Sobic004G154800 Sobic002G230600--Sobic004G154800 Sobic006G265900 Sobic006G265900 Sobic002G230600--Sobic006G265900 Sobic002G351600 Sobic002G351600 Sobic002G230600--Sobic002G351600 Sobic004G305900 Sobic004G305900 Sobic002G230600--Sobic004G305900 Sobic001G500600 Sobic001G500600 Sobic010G171600--Sobic001G500600 Sobic006G233700 Sobic006G233700 Sobic010G171600--Sobic006G233700 Sobic003G233700 Sobic003G233700 Sobic010G171600--Sobic003G233700 Sobic007G103400 Sobic007G103400 Sobic010G171600--Sobic007G103400 Sobic001G516901 Sobic001G516901 Sobic010G171600--Sobic001G516901 Sobic006G197300 Sobic006G197300 Sobic010G171600--Sobic006G197300 Sobic008G074000 Sobic008G074000 Sobic010G171600--Sobic008G074000 Sobic003G287900 Sobic003G287900 Sobic010G171600--Sobic003G287900 Sobic004G336200 Sobic004G336200 Sobic010G171600--Sobic004G336200 Sobic006G173600 Sobic006G173600 Sobic003G404300--Sobic006G173600 Sobic002G102200 Sobic002G102200 Sobic003G404300--Sobic002G102200 Sobic010G186000 Sobic010G186000 Sobic003G404300--Sobic010G186000 Sobic010G140600 Sobic010G140600 Sobic003G404300--Sobic010G140600 Sobic001G437100 Sobic001G437100 Sobic003G404300--Sobic001G437100 Sobic003G404300--Sobic010G171600 Sobic002G279700 Sobic002G279700 Sobic003G404300--Sobic002G279700 Sobic005G149400 Sobic005G149400 Sobic003G404300--Sobic005G149400 Sobic002G128900 Sobic002G128900 Sobic003G404300--Sobic002G128900 Sobic008G037800--Sobic002G072400 Sobic004G252500 Sobic004G252500 Sobic008G037800--Sobic004G252500 Sobic004G165900 Sobic004G165900 Sobic008G037800--Sobic004G165900 Sobic006G155500 Sobic006G155500 Sobic008G037800--Sobic006G155500 Sobic008G037800--Sobic010G062500 Sobic004G300100 Sobic004G300100 Sobic008G037800--Sobic004G300100 Sobic004G324100 Sobic004G324100 Sobic008G037800--Sobic004G324100 Sobic003G108900 Sobic003G108900 Sobic008G037800--Sobic003G108900 Sobic004G307100 Sobic004G307100 Sobic008G037800--Sobic004G307100 Sobic002G389900 Sobic002G389900 Sobic008G116000--Sobic002G389900 Sobic001G082000 Sobic001G082000 Sobic008G116000--Sobic001G082000 Sobic004G018000 Sobic004G018000 Sobic008G116000--Sobic004G018000 Sobic008G116000--Sobic002G279700 Sobic004G121300 Sobic004G121300 Sobic008G116000--Sobic004G121300 Sobic003G218300 Sobic003G218300 Sobic008G116000--Sobic003G218300 Sobic008G116000--Sobic003G186900 Sobic006G196300 Sobic006G196300 Sobic008G116000--Sobic006G196300 Sobic004G252900 Sobic004G252900 Sobic008G116000--Sobic004G252900 Sobic010G013200 Sobic010G013200 Sobic001G049500--Sobic010G013200 Sobic008G081300 Sobic008G081300 Sobic001G049500--Sobic008G081300 Sobic009G201300 Sobic009G201300 Sobic001G049500--Sobic009G201300 Sobic002G311100 Sobic002G311100 Sobic001G049500--Sobic002G311100 Sobic001G251100 Sobic001G251100 Sobic001G049500--Sobic001G251100 Sobic003G340600 Sobic003G340600 Sobic001G049500--Sobic003G340600 Sobic001G241100 Sobic001G241100 Sobic001G049500--Sobic001G241100 Sobic001G049500--Sobic006G219600 Sobic001G396000 Sobic001G396000 Sobic001G049500--Sobic001G396000 Sobic004G207400 Sobic004G207400 Sobic002G072400--Sobic004G207400 Sobic002G349100 Sobic002G349100 Sobic002G072400--Sobic002G349100 Sobic004G317700 Sobic004G317700 Sobic002G072400--Sobic004G317700 Sobic004G238200 Sobic004G238200 Sobic002G072400--Sobic004G238200 Sobic002G129400 Sobic002G129400 Sobic002G072400--Sobic002G129400 Sobic002G072400--Sobic004G307100 Sobic004G281900 Sobic004G281900 Sobic002G072400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic002G072400--Sobic007G166200 Sobic002G081400 Sobic002G081400 Sobic002G072400--Sobic002G081400 Sobic004G097200--Sobic004G324100 Sobic004G097200--Sobic002G279700 Sobic002G280100 Sobic002G280100 Sobic004G097200--Sobic002G280100 Sobic005G004500 Sobic005G004500 Sobic004G097200--Sobic005G004500 Sobic004G097200--Sobic010G062500 Sobic003G373600 Sobic003G373600 Sobic004G097200--Sobic003G373600 Sobic001G309900 Sobic001G309900 Sobic004G097200--Sobic001G309900 Sobic004G097200--Sobic004G305900 Sobic001G352200 Sobic001G352200 Sobic004G097200--Sobic001G352200
Octagon: transcription factors


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