Gene annotation
Transcriptome id Sobic.003G312500.1
Synonym Sb03g036060
Functional annotation transcription factor jumonji, putative, expressed
UniProt C5XLK9
Pfam PF08007
Panther DB PTHR12461 PTHR12461:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G19840 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os01g56640.3 : transcription factor jumonji, putative, expressed
MaizeGDB (Corn) Zm00025a039926
Brachypodium KQK09999
Barley HORVU3Hr1G075750.31 , HORVU3Hr1G075750.30 , HORVU3Hr1G075750.20 , HORVU3Hr1G075750.22 , HORVU3Hr1G075750.23 , HORVU3Hr1G075750.24 , HORVU3Hr1G075750.25 , HORVU3Hr1G075750.26 , HORVU3Hr1G075750.27 , HORVU3Hr1G075750.28 , HORVU3Hr1G075750.19 , HORVU3Hr1G075750.18 , HORVU3Hr1G075750.29 , HORVU3Hr1G075750.15 , HORVU3Hr1G075750.14 , HORVU3Hr1G075750.17 , HORVU3Hr1G075750.16 , HORVU3Hr1G075750.11 , HORVU3Hr1G075750.10 , HORVU3Hr1G075750.13 , HORVU3Hr1G075750.12 , HORVU3Hr1G075750.9 , HORVU3Hr1G075750.8 , HORVU3Hr1G075750.1 , HORVU3Hr1G075750.3 , HORVU3Hr1G075750.2 , HORVU3Hr1G075750.5 , HORVU3Hr1G075750.4 , HORVU3Hr1G075750.7 , HORVU3Hr1G075750.6
Wheat TraesCS3D02G309100 , TraesCS3D02G309100 , TraesCS3D02G309100 , TraesCS3B02G343200 , TraesCS3B02G343200 , TraesCS3A02G322300 , TraesCS3A02G322300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
2 Sobic.010G034100 GTP-binding protein GUF1, putative, expressed -
3 Sobic.001G283600 NTMC2Type1.2 protein, putative, expressed -
4 Sobic.003G241700 SET domain containing protein, expressed -
5 Sobic.009G256900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G192000 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
7 Sobic.008G082500 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
8 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
9 Sobic.003G221400 tetratricopeptide repeat domain containing protein, expressed K00670: NAA30, N-alpha-acetyltransferase 30
10 Sobic.006G093300 expressed protein K02519: infB, translation initiation factor IF-2
11 Sobic.001G255800 CPuORF15 - conserved peptide uORF-containing transcript, expressed -
12 Sobic.006G184900 tetratricopeptide repeat domain containing protein, expressed K15176: RNA polymerase-associated protein CTR9
13 Sobic.008G088872 - -
14 Sobic.003G296900 expressed protein -
15 Sobic.004G337800 UDP-glucose glycoprotein glucosyltransferase 1 precursor, putative, expressed K11718: UDP-glucose:glycoprotein glucosyltransferase
16 Sobic.007G054800 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase
17 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
18 Sobic.008G157200 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
19 Sobic.002G335600 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
20 Sobic.001G151100 CCR4-NOT transcription factor, putative, expressed K12580: CNOT3, CCR4-NOT transcription complex subunit 3


Gene co-expression network
sample Sobic003G312500 Sobic003G312500 Sobic010G059500 Sobic010G059500 Sobic003G312500--Sobic010G059500 Sobic010G034100 Sobic010G034100 Sobic003G312500--Sobic010G034100 Sobic001G283600 Sobic001G283600 Sobic003G312500--Sobic001G283600 Sobic003G241700 Sobic003G241700 Sobic003G312500--Sobic003G241700 Sobic009G256900 Sobic009G256900 Sobic003G312500--Sobic009G256900 Sobic001G192000 Sobic001G192000 Sobic003G312500--Sobic001G192000 Sobic008G082500 Sobic008G082500 Sobic003G312500--Sobic008G082500 Sobic001G333100 Sobic001G333100 Sobic003G312500--Sobic001G333100 Sobic003G221400 Sobic003G221400 Sobic003G312500--Sobic003G221400 Sobic009G084900 Sobic009G084900 Sobic010G059500--Sobic009G084900 Sobic009G131300 Sobic009G131300 Sobic010G059500--Sobic009G131300 Sobic001G035200 Sobic001G035200 Sobic010G059500--Sobic001G035200 Sobic004G096400 Sobic004G096400 Sobic010G059500--Sobic004G096400 Sobic006G234700 Sobic006G234700 Sobic010G059500--Sobic006G234700 Sobic001G145400 Sobic001G145400 Sobic010G059500--Sobic001G145400 Sobic010G059500--Sobic010G034100 Sobic006G077200 Sobic006G077200 Sobic010G059500--Sobic006G077200 Sobic001G493200 Sobic001G493200 Sobic010G059500--Sobic001G493200 Sobic010G034100--Sobic010G059500 Sobic010G034100--Sobic001G035200 Sobic009G192300 Sobic009G192300 Sobic010G034100--Sobic009G192300 Sobic001G405600 Sobic001G405600 Sobic010G034100--Sobic001G405600 Sobic010G034100--Sobic009G084900 Sobic010G034100--Sobic001G283600 Sobic001G020000 Sobic001G020000 Sobic010G034100--Sobic001G020000 Sobic006G252900 Sobic006G252900 Sobic010G034100--Sobic006G252900 Sobic002G227500 Sobic002G227500 Sobic010G034100--Sobic002G227500 Sobic007G162100 Sobic007G162100 Sobic001G283600--Sobic007G162100 Sobic001G283600--Sobic010G034100 Sobic008G048300 Sobic008G048300 Sobic001G283600--Sobic008G048300 Sobic002G170200 Sobic002G170200 Sobic001G283600--Sobic002G170200 Sobic006G127600 Sobic006G127600 Sobic001G283600--Sobic006G127600 Sobic006G039400 Sobic006G039400 Sobic001G283600--Sobic006G039400 Sobic008G033500 Sobic008G033500 Sobic001G283600--Sobic008G033500 Sobic006G093300 Sobic006G093300 Sobic001G283600--Sobic006G093300 Sobic001G283600--Sobic008G082500 Sobic003G043000 Sobic003G043000 Sobic003G241700--Sobic003G043000 Sobic003G296900 Sobic003G296900 Sobic003G241700--Sobic003G296900 Sobic009G228000 Sobic009G228000 Sobic003G241700--Sobic009G228000 Sobic004G209700 Sobic004G209700 Sobic003G241700--Sobic004G209700 Sobic004G265500 Sobic004G265500 Sobic003G241700--Sobic004G265500 Sobic010G000800 Sobic010G000800 Sobic003G241700--Sobic010G000800 Sobic003G241700--Sobic006G234700 Sobic004G213800 Sobic004G213800 Sobic003G241700--Sobic004G213800 Sobic003G241700--Sobic010G034100 Sobic001G493700 Sobic001G493700 Sobic009G256900--Sobic001G493700 Sobic002G133300 Sobic002G133300 Sobic009G256900--Sobic002G133300 Sobic003G441900 Sobic003G441900 Sobic009G256900--Sobic003G441900 Sobic009G256900--Sobic006G127600 Sobic001G002000 Sobic001G002000 Sobic009G256900--Sobic001G002000 Sobic003G095900 Sobic003G095900 Sobic009G256900--Sobic003G095900 Sobic009G256900--Sobic003G221400 Sobic001G089600 Sobic001G089600 Sobic009G256900--Sobic001G089600 Sobic006G184900 Sobic006G184900 Sobic009G256900--Sobic006G184900 Sobic002G275700 Sobic002G275700 Sobic001G192000--Sobic002G275700 Sobic009G255700 Sobic009G255700 Sobic001G192000--Sobic009G255700 Sobic005G162500 Sobic005G162500 Sobic001G192000--Sobic005G162500 Sobic008G088872 Sobic008G088872 Sobic001G192000--Sobic008G088872 Sobic001G192000--Sobic001G333100 Sobic003G195000 Sobic003G195000 Sobic001G192000--Sobic003G195000 Sobic002G146300 Sobic002G146300 Sobic001G192000--Sobic002G146300 Sobic001G370900 Sobic001G370900 Sobic001G192000--Sobic001G370900 Sobic001G192000--Sobic003G221400 Sobic008G082500--Sobic009G084900 Sobic010G185400 Sobic010G185400 Sobic008G082500--Sobic010G185400 Sobic010G206300 Sobic010G206300 Sobic008G082500--Sobic010G206300 Sobic008G082500--Sobic006G077200 Sobic008G082500--Sobic010G059500 Sobic008G082500--Sobic001G493200 Sobic002G020700 Sobic002G020700 Sobic008G082500--Sobic002G020700 Sobic008G082500--Sobic001G145400 Sobic004G023100 Sobic004G023100 Sobic008G082500--Sobic004G023100 Sobic003G264100 Sobic003G264100 Sobic001G333100--Sobic003G264100 Sobic001G333100--Sobic002G020700 Sobic001G333100--Sobic003G221400 Sobic001G333100--Sobic001G192000 Sobic010G020400 Sobic010G020400 Sobic001G333100--Sobic010G020400 Sobic002G142900 Sobic002G142900 Sobic001G333100--Sobic002G142900 Sobic010G223300 Sobic010G223300 Sobic001G333100--Sobic010G223300 Sobic001G251100 Sobic001G251100 Sobic001G333100--Sobic001G251100 Sobic001G333100--Sobic008G033500 Sobic007G054800 Sobic007G054800 Sobic003G221400--Sobic007G054800 Sobic003G221400--Sobic005G162500 Sobic003G221400--Sobic001G493700 Sobic001G110600 Sobic001G110600 Sobic003G221400--Sobic001G110600 Sobic001G004400 Sobic001G004400 Sobic003G221400--Sobic001G004400 Sobic003G221400--Sobic001G333100 Sobic002G179400 Sobic002G179400 Sobic003G221400--Sobic002G179400 Sobic003G221400--Sobic001G192000 Sobic008G085300 Sobic008G085300 Sobic003G221400--Sobic008G085300
Octagon: transcription factors


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