Gene annotation
Transcriptome id Sobic.003G321000.1
Synonym MES1, Sb03g036770, ATMES1
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)" (PubMedID : 27586543)
OsPOP4 - Putative Prolyl Oligopeptidase homologue, expressed
UniProt C5XMB9
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF813
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23620 : methyl esterase 1
RAP-DB (Rice) LOC_Os01g57770.1 : OsPOP4 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a027246 , Zm00025a039872
Brachypodium KQK10123
Barley HORVU4Hr1G076750.6 , HORVU4Hr1G076750.5 , HORVU4Hr1G076750.4 , HORVU4Hr1G076750.3 , HORVU4Hr1G076750.2 , HORVU4Hr1G076750.1 , HORVU3Hr1G077610.2 , HORVU3Hr1G077610.3 , HORVU3Hr1G077610.1
Wheat TraesCS4B02G296400 , TraesCS4B02G296400 , TraesCS4D02G295100 , TraesCS4D02G295300 , TraesCS4A02G008600 , TraesCS4A02G008500 , TraesCS3A02G325300 , TraesCS3A02G325300
Populus -


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cDNA sequences
Sobic.003G321000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G373000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.001G526200 homeobox protein knotted-1, putative, expressed -
3 Sobic.002G219200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@plant viral response family protein, putative, expressed -
4 Sobic.001G324900 proline-rich family protein, putative, expressed -
5 Sobic.003G039400 similar to 17.8 kDa class II heat shock protein(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@similar to 17.8 kDa class II heat shock protein(PubMedID : 24655390)@similar to 17.8 kDa class II heat shock protein(PubMedID : 24655390)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
6 Sobic.004G042600 protein kinase domain containing protein, expressed -
7 Sobic.010G200700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.003G082000 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
9 Sobic.003G377700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
10 Sobic.003G270300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.009G057400 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
12 Sobic.003G081900 hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
13 Sobic.010G175200 low-affinity cation transporter, putative, expressed -
14 Sobic.003G431000 spotted leaf 11, putative, expressed -
15 Sobic.004G219600 DUF640 domain containing protein, putative, expressed -
16 Sobic.002G188700 armadillo/beta-catenin repeat family protein, putative, expressed -
17 Sobic.003G012800 AP2 domain containing protein, expressed -
18 Sobic.004G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09843: (+)-abscisic acid 8'-hydroxylase
19 Sobic.009G167000 expressed protein -
20 Sobic.010G245800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic003G321000 Sobic003G321000 Sobic003G373000 Sobic003G373000 Sobic003G321000--Sobic003G373000 Sobic001G526200 Sobic001G526200 Sobic003G321000--Sobic001G526200 Sobic002G219200 Sobic002G219200 Sobic003G321000--Sobic002G219200 Sobic001G324900 Sobic001G324900 Sobic003G321000--Sobic001G324900 Sobic003G039400 Sobic003G039400 Sobic003G321000--Sobic003G039400 Sobic004G042600 Sobic004G042600 Sobic003G321000--Sobic004G042600 Sobic010G200700 Sobic010G200700 Sobic003G321000--Sobic010G200700 Sobic003G082000 Sobic003G082000 Sobic003G321000--Sobic003G082000 Sobic003G377700 Sobic003G377700 Sobic003G321000--Sobic003G377700 Sobic003G373000--Sobic010G200700 Sobic003G012800 Sobic003G012800 Sobic003G373000--Sobic003G012800 Sobic002G036100 Sobic002G036100 Sobic003G373000--Sobic002G036100 Sobic004G286600 Sobic004G286600 Sobic003G373000--Sobic004G286600 Sobic010G245800 Sobic010G245800 Sobic003G373000--Sobic010G245800 Sobic006G089300 Sobic006G089300 Sobic003G373000--Sobic006G089300 Sobic009G066800 Sobic009G066800 Sobic003G373000--Sobic009G066800 Sobic001G513700 Sobic001G513700 Sobic003G373000--Sobic001G513700 Sobic001G077400 Sobic001G077400 Sobic003G373000--Sobic001G077400 Sobic003G108200 Sobic003G108200 Sobic001G526200--Sobic003G108200 Sobic003G270300 Sobic003G270300 Sobic001G526200--Sobic003G270300 Sobic002G210300 Sobic002G210300 Sobic001G526200--Sobic002G210300 Sobic001G526200--Sobic010G200700 Sobic001G526200--Sobic003G373000 Sobic001G429900 Sobic001G429900 Sobic001G526200--Sobic001G429900 Sobic001G217000 Sobic001G217000 Sobic001G526200--Sobic001G217000 Sobic010G238800 Sobic010G238800 Sobic001G526200--Sobic010G238800 Sobic001G526200--Sobic003G012800 Sobic009G057400 Sobic009G057400 Sobic002G219200--Sobic009G057400 Sobic003G363200 Sobic003G363200 Sobic002G219200--Sobic003G363200 Sobic002G219200--Sobic010G200700 Sobic001G035000 Sobic001G035000 Sobic002G219200--Sobic001G035000 Sobic002G219200--Sobic004G042600 Sobic006G267000 Sobic006G267000 Sobic002G219200--Sobic006G267000 Sobic006G274300 Sobic006G274300 Sobic002G219200--Sobic006G274300 Sobic002G219200--Sobic003G082000 Sobic002G219200--Sobic010G245800 Sobic002G022400 Sobic002G022400 Sobic001G324900--Sobic002G022400 Sobic004G247200 Sobic004G247200 Sobic001G324900--Sobic004G247200 Sobic001G525400 Sobic001G525400 Sobic001G324900--Sobic001G525400 Sobic002G280200 Sobic002G280200 Sobic001G324900--Sobic002G280200 Sobic008G161000 Sobic008G161000 Sobic001G324900--Sobic008G161000 Sobic003G249800 Sobic003G249800 Sobic001G324900--Sobic003G249800 Sobic006G062800 Sobic006G062800 Sobic001G324900--Sobic006G062800 Sobic010G217900 Sobic010G217900 Sobic001G324900--Sobic010G217900 Sobic010G204300 Sobic010G204300 Sobic001G324900--Sobic010G204300 Sobic003G431000 Sobic003G431000 Sobic003G039400--Sobic003G431000 Sobic003G081900 Sobic003G081900 Sobic003G039400--Sobic003G081900 Sobic009G167000 Sobic009G167000 Sobic003G039400--Sobic009G167000 Sobic001G398500 Sobic001G398500 Sobic003G039400--Sobic001G398500 Sobic009G184400 Sobic009G184400 Sobic003G039400--Sobic009G184400 Sobic005G139700 Sobic005G139700 Sobic003G039400--Sobic005G139700 Sobic003G039400--Sobic010G200700 Sobic003G039400--Sobic003G363200 Sobic002G248100 Sobic002G248100 Sobic003G039400--Sobic002G248100 Sobic004G042600--Sobic010G200700 Sobic004G297200 Sobic004G297200 Sobic004G042600--Sobic004G297200 Sobic002G080000 Sobic002G080000 Sobic004G042600--Sobic002G080000 Sobic010G175200 Sobic010G175200 Sobic004G042600--Sobic010G175200 Sobic006G228300 Sobic006G228300 Sobic004G042600--Sobic006G228300 Sobic004G042600--Sobic003G363200 Sobic004G042600--Sobic002G219200 Sobic006G078400 Sobic006G078400 Sobic004G042600--Sobic006G078400 Sobic003G429300 Sobic003G429300 Sobic004G042600--Sobic003G429300 Sobic010G200700--Sobic004G297200 Sobic010G200700--Sobic006G089300 Sobic010G200700--Sobic003G012800 Sobic010G200700--Sobic006G228300 Sobic010G200700--Sobic003G373000 Sobic010G200700--Sobic009G066800 Sobic010G200700--Sobic002G036100 Sobic010G200700--Sobic010G245800 Sobic002G131800 Sobic002G131800 Sobic010G200700--Sobic002G131800 Sobic003G082000--Sobic010G200700 Sobic003G082000--Sobic009G167000 Sobic002G188700 Sobic002G188700 Sobic003G082000--Sobic002G188700 Sobic003G082000--Sobic004G297200 Sobic003G082000--Sobic002G219200 Sobic003G082000--Sobic009G057400 Sobic003G082000--Sobic004G042600 Sobic003G082000--Sobic003G363200 Sobic004G300300 Sobic004G300300 Sobic003G082000--Sobic004G300300 Sobic004G123000 Sobic004G123000 Sobic003G377700--Sobic004G123000 Sobic004G318100 Sobic004G318100 Sobic003G377700--Sobic004G318100 Sobic002G362000 Sobic002G362000 Sobic003G377700--Sobic002G362000 Sobic005G079500 Sobic005G079500 Sobic003G377700--Sobic005G079500 Sobic001G077000 Sobic001G077000 Sobic003G377700--Sobic001G077000 Sobic001G352500 Sobic001G352500 Sobic003G377700--Sobic001G352500 Sobic003G377700--Sobic004G247200 Sobic009G171100 Sobic009G171100 Sobic003G377700--Sobic009G171100 Sobic009G183300 Sobic009G183300 Sobic003G377700--Sobic009G183300
Octagon: transcription factors


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