Gene annotation
Transcriptome id Sobic.003G384300.1
Synonym
Functional annotation NADP-dependent oxidoreductase, putative, expressed
UniProt C5XER1
Pfam PF12708 PF00107 PF16884
Panther DB PTHR31375 PTHR31375:SF47
NCBI CDD KOG1196; Predicted NAD-dependent oxidoreductase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65560 : Zinc-binding dehydrogenase family protein
RAP-DB (Rice) LOC_Os01g66720.1 : NADP-dependent oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a044423 , Zm00025a026482 , Zm00025a026481
Brachypodium PNT73357 , KQK10987 , KQK10986
Barley HORVU1Hr1G079170.35 , HORVU1Hr1G079170.34 , HORVU1Hr1G079170.37 , HORVU1Hr1G079170.31 , HORVU1Hr1G079170.30 , HORVU1Hr1G079170.33 , HORVU1Hr1G079170.32 , HORVU1Hr1G079170.39 , HORVU7Hr1G075560.2 , HORVU7Hr1G075560.3 , HORVU7Hr1G075560.1 , HORVU3Hr1G090110.2 , HORVU3Hr1G090110.1 , HORVU3Hr1G090050.53 , HORVU3Hr1G090050.52 , HORVU3Hr1G090050.51 , HORVU3Hr1G090050.56 , HORVU3Hr1G090050.55 , HORVU3Hr1G090050.54 , HORVU3Hr1G090050.26 , HORVU3Hr1G090050.24 , HORVU3Hr1G090050.25 , HORVU3Hr1G090050.22 , HORVU3Hr1G090050.28 , HORVU3Hr1G090120.3 , HORVU3Hr1G090120.2 , HORVU3Hr1G090120.1 , HORVU1Hr1G079170.36 , HORVU4Hr1G042670.31 , HORVU4Hr1G042670.30 , HORVU1Hr1G079170.28 , HORVU1Hr1G079170.29 , HORVU1Hr1G079170.22 , HORVU1Hr1G079170.23 , HORVU1Hr1G079170.20 , HORVU1Hr1G079170.21 , HORVU1Hr1G079170.26 , HORVU1Hr1G079170.27 , HORVU1Hr1G079170.24 , HORVU1Hr1G079170.25 , HORVU4Hr1G042670.3 , HORVU4Hr1G042670.2 , HORVU4Hr1G042670.1 , HORVU4Hr1G042670.7 , HORVU4Hr1G042670.6 , HORVU4Hr1G042670.4 , HORVU4Hr1G042670.9 , HORVU4Hr1G042670.8 , HORVU3Hr1G090050.41 , HORVU3Hr1G090050.45 , HORVU3Hr1G090050.47 , HORVU3Hr1G090050.48 , HORVU3Hr1G090050.49 , HORVU3Hr1G090050.35 , HORVU3Hr1G090050.34 , HORVU3Hr1G090050.37 , HORVU3Hr1G090050.36 , HORVU4Hr1G042670.28 , HORVU4Hr1G042670.22 , HORVU4Hr1G042670.23 , HORVU4Hr1G042670.20 , HORVU4Hr1G042670.21 , HORVU4Hr1G042670.26 , HORVU4Hr1G042670.27 , HORVU4Hr1G042670.24 , HORVU4Hr1G042670.25 , HORVU3Hr1G090050.3 , HORVU3Hr1G090050.2 , HORVU3Hr1G090050.1 , HORVU2Hr1G115450.2 , HORVU2Hr1G115450.1 , HORVU1Hr1G079170.56 , HORVU1Hr1G079170.55 , HORVU1Hr1G079170.54 , HORVU1Hr1G079170.53 , HORVU1Hr1G079170.52 , HORVU1Hr1G079170.51 , HORVU1Hr1G079170.50 , HORVU2Hr1G115460.6 , HORVU2Hr1G115460.5 , HORVU2Hr1G115460.4 , HORVU2Hr1G115460.3 , HORVU2Hr1G115460.2 , HORVU2Hr1G115460.1 , HORVU4Hr1G042670.13 , HORVU4Hr1G042670.12 , HORVU4Hr1G042670.11 , HORVU4Hr1G042670.10 , HORVU4Hr1G042670.17 , HORVU4Hr1G042670.16 , HORVU4Hr1G042670.15 , HORVU4Hr1G042670.14 , HORVU4Hr1G042670.19 , HORVU4Hr1G042670.18 , HORVU1Hr1G079170.48 , HORVU1Hr1G079170.49 , HORVU1Hr1G079170.44 , HORVU1Hr1G079170.45 , HORVU1Hr1G079170.46 , HORVU1Hr1G079170.47 , HORVU1Hr1G079170.40 , HORVU1Hr1G079170.41 , HORVU1Hr1G079170.42 , HORVU1Hr1G079170.43 , HORVU3Hr1G090050.31 , HORVU3Hr1G090050.32 , HORVU3Hr1G090050.39 , HORVU3Hr1G090050.38 , HORVU3Hr1G090050.15 , HORVU3Hr1G090050.14 , HORVU3Hr1G090050.13 , HORVU3Hr1G090050.12 , HORVU3Hr1G090050.11 , HORVU3Hr1G090050.10
Wheat TraesCS3D02G396300 , TraesCS3B02G434300 , TraesCS3A02G401400 , TraesCS1B02G382200 , TraesCS1B02G382200 , TraesCS3A02G401500 , TraesCS3D02G396000 , TraesCS3B02G434400 , TraesCS3D02G396200 , TraesCS1A02G364800 , TraesCS1A02G364800 , TraesCS1A02G364800 , TraesCS1A02G364800
Populus -


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cDNA sequences
Sobic.003G384300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G447600 squalene monooxygenase, putative, expressed K00511: SQLE, squalene monooxygenase
2 Sobic.010G024100 tRNA 2-phosphotransferase 1, putative, expressed K10669: TRPT1, 2'-phosphotransferase
3 Sobic.004G023900 3-isopropylmalate dehydratase large subunit 2, putative, expressed K01703: leuC, 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
4 Sobic.003G421201 - K00844: hexokinase
5 Sobic.004G097200 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
6 Sobic.008G116000 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
7 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
8 Sobic.002G279700 3-dehydroquinate synthase, putative, expressed K01735: 3-dehydroquinate synthase
9 Sobic.003G103400 anaphase-promoting complex subunit 11, putative, expressed K03868: RBX1, RING-box protein 1
10 Sobic.007G165300 SNARE domain containing protein, putative, expressed K08504: blocked early in transport 1
11 Sobic.005G004500 ferritin-1, chloroplast precursor, putative, expressed K00522: ferritin heavy chain
12 Sobic.010G054000 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
13 Sobic.002G185900 zinc finger protein-related, putative, expressed -
14 Sobic.006G011000 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, putative, expressed K12893: splicing factor, arginine/serine-rich 4/5/6
15 Sobic.003G402600 ubiquitin family domain containing protein, expressed K12160: SUMO, small ubiquitin-related modifier
16 Sobic.008G125900 drought induced 19 protein, putative, expressed -
17 Sobic.007G170900 histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
18 Sobic.003G190500 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
19 Sobic.002G390300 heat shock protein DnaJ, putative, expressed -
20 Sobic.002G129200 DNA-directed RNA polymerase subunit, putative, expressed K03014: RPB6, DNA-directed RNA polymerases I, II, and III subunit RPABC2


Gene co-expression network
sample Sobic003G384300 Sobic003G384300 Sobic001G447600 Sobic001G447600 Sobic003G384300--Sobic001G447600 Sobic010G024100 Sobic010G024100 Sobic003G384300--Sobic010G024100 Sobic004G023900 Sobic004G023900 Sobic003G384300--Sobic004G023900 Sobic003G421201 Sobic003G421201 Sobic003G384300--Sobic003G421201 Sobic004G097200 Sobic004G097200 Sobic003G384300--Sobic004G097200 Sobic008G116000 Sobic008G116000 Sobic003G384300--Sobic008G116000 Sobic003G216500 Sobic003G216500 Sobic003G384300--Sobic003G216500 Sobic002G279700 Sobic002G279700 Sobic003G384300--Sobic002G279700 Sobic003G103400 Sobic003G103400 Sobic003G384300--Sobic003G103400 Sobic007G069200 Sobic007G069200 Sobic001G447600--Sobic007G069200 Sobic001G447600--Sobic003G216500 Sobic001G447600--Sobic003G384300 Sobic003G244200 Sobic003G244200 Sobic001G447600--Sobic003G244200 Sobic001G447600--Sobic002G279700 Sobic005G004500 Sobic005G004500 Sobic001G447600--Sobic005G004500 Sobic001G447600--Sobic010G024100 Sobic009G017800 Sobic009G017800 Sobic001G447600--Sobic009G017800 Sobic005G133900 Sobic005G133900 Sobic001G447600--Sobic005G133900 Sobic002G262000 Sobic002G262000 Sobic010G024100--Sobic002G262000 Sobic010G156000 Sobic010G156000 Sobic010G024100--Sobic010G156000 Sobic009G178200 Sobic009G178200 Sobic010G024100--Sobic009G178200 Sobic001G412100 Sobic001G412100 Sobic010G024100--Sobic001G412100 Sobic010G265300 Sobic010G265300 Sobic010G024100--Sobic010G265300 Sobic002G332900 Sobic002G332900 Sobic010G024100--Sobic002G332900 Sobic009G243100 Sobic009G243100 Sobic010G024100--Sobic009G243100 Sobic001G447900 Sobic001G447900 Sobic010G024100--Sobic001G447900 Sobic010G108900 Sobic010G108900 Sobic010G024100--Sobic010G108900 Sobic003G190500 Sobic003G190500 Sobic004G023900--Sobic003G190500 Sobic001G039500 Sobic001G039500 Sobic004G023900--Sobic001G039500 Sobic009G127300 Sobic009G127300 Sobic004G023900--Sobic009G127300 Sobic006G245100 Sobic006G245100 Sobic004G023900--Sobic006G245100 Sobic004G018000 Sobic004G018000 Sobic004G023900--Sobic004G018000 Sobic003G159500 Sobic003G159500 Sobic004G023900--Sobic003G159500 Sobic002G390300 Sobic002G390300 Sobic004G023900--Sobic002G390300 Sobic001G008700 Sobic001G008700 Sobic004G023900--Sobic001G008700 Sobic002G119400 Sobic002G119400 Sobic004G023900--Sobic002G119400 Sobic002G257200 Sobic002G257200 Sobic003G421201--Sobic002G257200 Sobic005G036800 Sobic005G036800 Sobic003G421201--Sobic005G036800 Sobic003G421201--Sobic003G384300 Sobic003G421201--Sobic002G390300 Sobic004G279100 Sobic004G279100 Sobic003G421201--Sobic004G279100 Sobic009G015700 Sobic009G015700 Sobic003G421201--Sobic009G015700 Sobic010G054000 Sobic010G054000 Sobic003G421201--Sobic010G054000 Sobic001G422700 Sobic001G422700 Sobic003G421201--Sobic001G422700 Sobic003G316700 Sobic003G316700 Sobic003G421201--Sobic003G316700 Sobic004G324100 Sobic004G324100 Sobic004G097200--Sobic004G324100 Sobic004G097200--Sobic002G279700 Sobic002G280100 Sobic002G280100 Sobic004G097200--Sobic002G280100 Sobic004G097200--Sobic005G004500 Sobic010G062500 Sobic010G062500 Sobic004G097200--Sobic010G062500 Sobic003G373600 Sobic003G373600 Sobic004G097200--Sobic003G373600 Sobic001G309900 Sobic001G309900 Sobic004G097200--Sobic001G309900 Sobic004G305900 Sobic004G305900 Sobic004G097200--Sobic004G305900 Sobic001G352200 Sobic001G352200 Sobic004G097200--Sobic001G352200 Sobic002G389900 Sobic002G389900 Sobic008G116000--Sobic002G389900 Sobic001G082000 Sobic001G082000 Sobic008G116000--Sobic001G082000 Sobic008G116000--Sobic004G018000 Sobic008G116000--Sobic002G279700 Sobic004G121300 Sobic004G121300 Sobic008G116000--Sobic004G121300 Sobic003G218300 Sobic003G218300 Sobic008G116000--Sobic003G218300 Sobic003G186900 Sobic003G186900 Sobic008G116000--Sobic003G186900 Sobic006G196300 Sobic006G196300 Sobic008G116000--Sobic006G196300 Sobic004G252900 Sobic004G252900 Sobic008G116000--Sobic004G252900 Sobic002G410700 Sobic002G410700 Sobic003G216500--Sobic002G410700 Sobic004G182500 Sobic004G182500 Sobic003G216500--Sobic004G182500 Sobic009G240700 Sobic009G240700 Sobic003G216500--Sobic009G240700 Sobic001G473400 Sobic001G473400 Sobic003G216500--Sobic001G473400 Sobic003G170300 Sobic003G170300 Sobic003G216500--Sobic003G170300 Sobic002G073800 Sobic002G073800 Sobic003G216500--Sobic002G073800 Sobic003G279200 Sobic003G279200 Sobic003G216500--Sobic003G279200 Sobic006G020900 Sobic006G020900 Sobic003G216500--Sobic006G020900 Sobic001G290700 Sobic001G290700 Sobic003G216500--Sobic001G290700 Sobic002G128900 Sobic002G128900 Sobic002G279700--Sobic002G128900 Sobic006G261700 Sobic006G261700 Sobic002G279700--Sobic006G261700 Sobic001G295300 Sobic001G295300 Sobic002G279700--Sobic001G295300 Sobic002G200900 Sobic002G200900 Sobic002G279700--Sobic002G200900 Sobic002G233700 Sobic002G233700 Sobic002G279700--Sobic002G233700 Sobic008G188600 Sobic008G188600 Sobic002G279700--Sobic008G188600 Sobic001G020100 Sobic001G020100 Sobic002G279700--Sobic001G020100 Sobic008G006200 Sobic008G006200 Sobic002G279700--Sobic008G006200 Sobic004G307400 Sobic004G307400 Sobic002G279700--Sobic004G307400 Sobic006G002201 Sobic006G002201 Sobic003G103400--Sobic006G002201 Sobic008G093200 Sobic008G093200 Sobic003G103400--Sobic008G093200 Sobic003G103400--Sobic003G216500 Sobic010G013900 Sobic010G013900 Sobic003G103400--Sobic010G013900 Sobic005G105500 Sobic005G105500 Sobic003G103400--Sobic005G105500 Sobic003G028100 Sobic003G028100 Sobic003G103400--Sobic003G028100 Sobic003G103400--Sobic004G182500 Sobic001G096100 Sobic001G096100 Sobic003G103400--Sobic001G096100 Sobic009G168000 Sobic009G168000 Sobic003G103400--Sobic009G168000
Octagon: transcription factors


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