Gene annotation
Transcriptome id Sobic.003G390900.1
Synonym Sb03g042840
Functional annotation lipase, putative, expressed
UniProt A0A1W0W117
Pfam PF01764
Panther DB PTHR31403 PTHR31403:SF16
NCBI CDD KOG4569; Predicted lipase
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT2G31690 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g67430.1 : lipase, putative, expressed
MaizeGDB (Corn) Zm00025a026408
Brachypodium -
Barley HORVU3Hr1G089140.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G133700 - -
2 Sobic.001G417600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
3 Sobic.002G260800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
4 Sobic.009G208400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.007G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type family protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
6 Sobic.003G189200 expressed protein -
7 Sobic.006G170400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.003G413900 expressed protein -
9 Sobic.001G447100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATP8, putative, expressed -
10 Sobic.001G488200 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
11 Sobic.004G225800 GEM, putative, expressed -
12 Sobic.009G208500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
13 Sobic.008G135100 membrane associated DUF588 domain containing protein, putative, expressed -
14 Sobic.008G175200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@RING-H2 finger protein ATL5D, putative, expressed -
15 Sobic.007G097700 DUF593 domain containing protein, expressed -
16 Sobic.007G074200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- -
17 Sobic.001G488000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.009G131400 basic 7S globulin precursor, putative, expressed -
19 Sobic.004G067900 expressed protein -
20 Sobic.003G062200 transcription factor HBP-1b, putative, expressed -


Gene co-expression network
sample Sobic003G390900 Sobic003G390900 Sobic010G133700 Sobic010G133700 Sobic003G390900--Sobic010G133700 Sobic001G417600 Sobic001G417600 Sobic003G390900--Sobic001G417600 Sobic002G260800 Sobic002G260800 Sobic003G390900--Sobic002G260800 Sobic009G208400 Sobic009G208400 Sobic003G390900--Sobic009G208400 Sobic007G178100 Sobic007G178100 Sobic003G390900--Sobic007G178100 Sobic003G189200 Sobic003G189200 Sobic003G390900--Sobic003G189200 Sobic006G170400 Sobic006G170400 Sobic003G390900--Sobic006G170400 Sobic003G413900 Sobic003G413900 Sobic003G390900--Sobic003G413900 Sobic001G447100 Sobic001G447100 Sobic003G390900--Sobic001G447100 Sobic010G133700--Sobic001G417600 Sobic003G036700 Sobic003G036700 Sobic010G133700--Sobic003G036700 Sobic005G175200 Sobic005G175200 Sobic010G133700--Sobic005G175200 Sobic003G095600 Sobic003G095600 Sobic010G133700--Sobic003G095600 Sobic006G147400 Sobic006G147400 Sobic010G133700--Sobic006G147400 Sobic010G198100 Sobic010G198100 Sobic010G133700--Sobic010G198100 Sobic001G082500 Sobic001G082500 Sobic010G133700--Sobic001G082500 Sobic007G194800 Sobic007G194800 Sobic010G133700--Sobic007G194800 Sobic006G132400 Sobic006G132400 Sobic010G133700--Sobic006G132400 Sobic001G417600--Sobic010G133700 Sobic006G139000 Sobic006G139000 Sobic001G417600--Sobic006G139000 Sobic001G280000 Sobic001G280000 Sobic001G417600--Sobic001G280000 Sobic001G417600--Sobic003G036700 Sobic001G417600--Sobic001G082500 Sobic009G208500 Sobic009G208500 Sobic001G417600--Sobic009G208500 Sobic001G417600--Sobic006G147400 Sobic001G417600--Sobic007G178100 Sobic001G417600--Sobic007G194800 Sobic003G437300 Sobic003G437300 Sobic002G260800--Sobic003G437300 Sobic002G046600 Sobic002G046600 Sobic002G260800--Sobic002G046600 Sobic001G488200 Sobic001G488200 Sobic002G260800--Sobic001G488200 Sobic002G240800 Sobic002G240800 Sobic002G260800--Sobic002G240800 Sobic006G244500 Sobic006G244500 Sobic002G260800--Sobic006G244500 Sobic004G067900 Sobic004G067900 Sobic002G260800--Sobic004G067900 Sobic002G260800--Sobic006G170400 Sobic003G002501 Sobic003G002501 Sobic002G260800--Sobic003G002501 Sobic004G225800 Sobic004G225800 Sobic002G260800--Sobic004G225800 Sobic009G208400--Sobic001G447100 Sobic003G067700 Sobic003G067700 Sobic009G208400--Sobic003G067700 Sobic009G208400--Sobic003G002501 Sobic009G208400--Sobic003G390900 Sobic008G135100 Sobic008G135100 Sobic009G208400--Sobic008G135100 Sobic007G180300 Sobic007G180300 Sobic009G208400--Sobic007G180300 Sobic003G409800 Sobic003G409800 Sobic009G208400--Sobic003G409800 Sobic007G057800 Sobic007G057800 Sobic009G208400--Sobic007G057800 Sobic001G488000 Sobic001G488000 Sobic009G208400--Sobic001G488000 Sobic007G178100--Sobic009G208500 Sobic001G251900 Sobic001G251900 Sobic007G178100--Sobic001G251900 Sobic007G178100--Sobic001G417600 Sobic001G298300 Sobic001G298300 Sobic007G178100--Sobic001G298300 Sobic009G038501 Sobic009G038501 Sobic007G178100--Sobic009G038501 Sobic004G236600 Sobic004G236600 Sobic007G178100--Sobic004G236600 Sobic001G151800 Sobic001G151800 Sobic007G178100--Sobic001G151800 Sobic004G246200 Sobic004G246200 Sobic007G178100--Sobic004G246200 Sobic009G004200 Sobic009G004200 Sobic007G178100--Sobic009G004200 Sobic002G224100 Sobic002G224100 Sobic003G189200--Sobic002G224100 Sobic007G025700 Sobic007G025700 Sobic003G189200--Sobic007G025700 Sobic004G307000 Sobic004G307000 Sobic003G189200--Sobic004G307000 Sobic004G304400 Sobic004G304400 Sobic003G189200--Sobic004G304400 Sobic003G363200 Sobic003G363200 Sobic003G189200--Sobic003G363200 Sobic003G429300 Sobic003G429300 Sobic003G189200--Sobic003G429300 Sobic001G474200 Sobic001G474200 Sobic003G189200--Sobic001G474200 Sobic008G111100 Sobic008G111100 Sobic003G189200--Sobic008G111100 Sobic005G212700 Sobic005G212700 Sobic003G189200--Sobic005G212700 Sobic006G066600 Sobic006G066600 Sobic006G170400--Sobic006G066600 Sobic002G419500 Sobic002G419500 Sobic006G170400--Sobic002G419500 Sobic006G170400--Sobic002G260800 Sobic001G191800 Sobic001G191800 Sobic006G170400--Sobic001G191800 Sobic006G170400--Sobic004G067900 Sobic001G106400 Sobic001G106400 Sobic006G170400--Sobic001G106400 Sobic002G308400 Sobic002G308400 Sobic006G170400--Sobic002G308400 Sobic006G096300 Sobic006G096300 Sobic006G170400--Sobic006G096300 Sobic002G290500 Sobic002G290500 Sobic006G170400--Sobic002G290500 Sobic009G142100 Sobic009G142100 Sobic003G413900--Sobic009G142100 Sobic007G074200 Sobic007G074200 Sobic003G413900--Sobic007G074200 Sobic002G393600 Sobic002G393600 Sobic003G413900--Sobic002G393600 Sobic002G338250 Sobic002G338250 Sobic003G413900--Sobic002G338250 Sobic006G224200 Sobic006G224200 Sobic003G413900--Sobic006G224200 Sobic006G220900 Sobic006G220900 Sobic003G413900--Sobic006G220900 Sobic004G341100 Sobic004G341100 Sobic003G413900--Sobic004G341100 Sobic003G413900--Sobic006G170400 Sobic006G218300 Sobic006G218300 Sobic003G413900--Sobic006G218300 Sobic003G349700 Sobic003G349700 Sobic001G447100--Sobic003G349700 Sobic004G024200 Sobic004G024200 Sobic001G447100--Sobic004G024200 Sobic007G176600 Sobic007G176600 Sobic001G447100--Sobic007G176600 Sobic008G111500 Sobic008G111500 Sobic001G447100--Sobic008G111500 Sobic001G447100--Sobic007G074200 Sobic001G100600 Sobic001G100600 Sobic001G447100--Sobic001G100600 Sobic001G477300 Sobic001G477300 Sobic001G447100--Sobic001G477300 Sobic009G131400 Sobic009G131400 Sobic001G447100--Sobic009G131400 Sobic003G041200 Sobic003G041200 Sobic001G447100--Sobic003G041200
Octagon: transcription factors


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